RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 GON7Q9BXV9 100 aa11.87□□□□□ -0.51
TRIM28-205ENST00000595028 VCX3AQ9NNX9 186 aa11.87□□□□□ -0.51
TRIM28-205ENST00000595028 RHBDL2Q9NX52 303 aa11.87□□□□□ -0.51
TRIM28-205ENST00000595028 KIAA1456Q9P272 454 aa11.87□□□□□ -0.51
TRIM28-205ENST00000595028 ZNF221Q9UK13 617 aa11.87□□□□□ -0.51
TRIM28-205ENST00000595028 RNF150Q9ULK6 438 aa11.87□□□□□ -0.51
TRIM28-205ENST00000595028 WASHC3Q9Y3C0 194 aa11.87□□□□□ -0.51
TRIM28-205ENST00000595028 A0A087WXM4 84 aa11.86□□□□□ -0.51
TRIM28-205ENST00000595028 TRBV6-7A0A0A0MS04 114 aa11.86□□□□□ -0.51
TRIM28-205ENST00000595028 PROP1O75360 226 aa11.86□□□□□ -0.51
TRIM28-205ENST00000595028 RBBP9O75884 186 aa11.86□□□□□ -0.51
TRIM28-205ENST00000595028 IGF1P05019 195 aa11.86□□□□□ -0.51
TRIM28-205ENST00000595028 GSTT2P0CG29 244 aa11.86□□□□□ -0.51
TRIM28-205ENST00000595028 GSTT2BP0CG30 244 aa11.86□□□□□ -0.51
TRIM28-205ENST00000595028 VDAC1P21796 283 aa11.86□□□□□ -0.51
TRIM28-205ENST00000595028 DTYMKP23919 212 aa11.86□□□□□ -0.51
TRIM28-205ENST00000595028 MC5RP33032 325 aa11.86□□□□□ -0.51
TRIM28-205ENST00000595028 TALDO1P37837 337 aa11.86□□□□□ -0.51
TRIM28-205ENST00000595028 SCAND1P57086 179 aa11.86□□□□□ -0.51
TRIM28-205ENST00000595028 SRSF7Q16629 238 aaKnown RBP eCLIP11.86□□□□□ -0.519e-7■□□□□ 10.6
TRIM28-205ENST00000595028 PNLIPRP3Q17RR3 467 aa11.86□□□□□ -0.51
TRIM28-205ENST00000595028 TIMM50Q3ZCQ8 353 aa11.86□□□□□ -0.51
TRIM28-205ENST00000595028 TEX38Q6PEX7 206 aa11.86□□□□□ -0.51
TRIM28-205ENST00000595028 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.86□□□□□ -0.51
TRIM28-205ENST00000595028 TSPAN14Q8NG11 270 aa11.86□□□□□ -0.51
TRIM28-205ENST00000595028 OR10J5Q8NHC4 309 aa11.86□□□□□ -0.51
TRIM28-205ENST00000595028 ZFP57Q9NU63 452 aa11.86□□□□□ -0.51
TRIM28-205ENST00000595028 ELF5Q9UKW6 265 aaPredicted RBP11.86□□□□□ -0.51
TRIM28-205ENST00000595028 ETV7Q9Y603 341 aa11.86□□□□□ -0.51
TRIM28-205ENST00000595028 IGKV1D-8A0A087WSZ0 117 aa11.85□□□□□ -0.51
TRIM28-205ENST00000595028 IGHV7-81A0A0B4J1V7 117 aa11.85□□□□□ -0.51
TRIM28-205ENST00000595028 H7C2Y5 167 aa11.85□□□□□ -0.51
TRIM28-205ENST00000595028 TFAP2AP05549 437 aa11.85□□□□□ -0.51
TRIM28-205ENST00000595028 GSTP1P09211 210 aaKnown RBP11.85□□□□□ -0.51
TRIM28-205ENST00000595028 CD33P20138 364 aa11.85□□□□□ -0.51
TRIM28-205ENST00000595028 SLC6A1P30531 599 aa11.85□□□□□ -0.51
TRIM28-205ENST00000595028 FOXE3Q13461 319 aa11.85□□□□□ -0.51
TRIM28-205ENST00000595028 CDNFQ49AH0 187 aa11.85□□□□□ -0.51
TRIM28-205ENST00000595028 OXLD1Q5BKU9 147 aa11.85□□□□□ -0.51
TRIM28-205ENST00000595028 HACD4Q5VWC8 232 aa11.85□□□□□ -0.51
TRIM28-205ENST00000595028 ETV3LQ6ZN32 361 aa11.85□□□□□ -0.51
TRIM28-205ENST00000595028 C18orf65Q6ZTR6 163 aa11.85□□□□□ -0.51
TRIM28-205ENST00000595028 RNF152Q8N8N0 203 aa11.85□□□□□ -0.51
TRIM28-205ENST00000595028 ZNF383Q8NA42 475 aa11.85□□□□□ -0.51
TRIM28-205ENST00000595028 DRAXINQ8NBI3 349 aaPredicted RBP11.85□□□□□ -0.51
TRIM28-205ENST00000595028 WFDC9Q8NEX5 89 aa11.85□□□□□ -0.51
TRIM28-205ENST00000595028 OR2D2Q9H210 308 aa11.85□□□□□ -0.51
TRIM28-205ENST00000595028 OR51J1Q9H342 316 aa11.85□□□□□ -0.51
TRIM28-205ENST00000595028 TMEM235A6NFC5 223 aa11.84□□□□□ -0.51
TRIM28-205ENST00000595028 NUDT19A8MXV4 375 aa11.84□□□□□ -0.51
TRIM28-205ENST00000595028 RRHO14718 337 aa11.84□□□□□ -0.51
TRIM28-205ENST00000595028 ATP6V0E1O15342 81 aa11.84□□□□□ -0.51
TRIM28-205ENST00000595028 IGHG4P01861 327 aa11.84□□□□□ -0.51
TRIM28-205ENST00000595028 RPLP1P05386 114 aaKnown RBP11.84□□□□□ -0.51
TRIM28-205ENST00000595028 ELANEP08246 267 aa11.84□□□□□ -0.51
TRIM28-205ENST00000595028 OR5H8P0DN80 308 aa11.84□□□□□ -0.51
TRIM28-205ENST00000595028 NDPQ00604 133 aa11.84□□□□□ -0.51
TRIM28-205ENST00000595028 CXorf66Q5JRM2 361 aaPredicted RBP11.84□□□□□ -0.51
TRIM28-205ENST00000595028 IDNKQ5T6J7 187 aa11.84□□□□□ -0.51
TRIM28-205ENST00000595028 C8orf86Q6ZUL3 223 aa11.84□□□□□ -0.51
TRIM28-205ENST00000595028 KLHL30-AS1Q8NEE0 82 aa11.84□□□□□ -0.51
TRIM28-205ENST00000595028 OR5H6Q8NGV6 325 aa11.84□□□□□ -0.51
TRIM28-205ENST00000595028 NUDCD2Q8WVJ2 157 aa11.84□□□□□ -0.51
TRIM28-205ENST00000595028 SLC25A38Q96DW6 304 aa11.84□□□□□ -0.51
TRIM28-205ENST00000595028 GINS4Q9BRT9 223 aa11.84□□□□□ -0.51
TRIM28-205ENST00000595028 FBXL15Q9H469 300 aa11.84□□□□□ -0.51
TRIM28-205ENST00000595028 PARP11Q9NR21 331 aa11.84□□□□□ -0.51
TRIM28-205ENST00000595028 COL7A1Q02388 2944 aa11.84□□□□□ -0.51
TRIM28-205ENST00000595028 M0R1X1 148 aa11.83□□□□□ -0.52
TRIM28-205ENST00000595028 AIREO43918 545 aa11.83□□□□□ -0.52
TRIM28-205ENST00000595028 APOA2P02652 100 aa11.83□□□□□ -0.52
TRIM28-205ENST00000595028 OR8U9P0C7N5 309 aa11.83□□□□□ -0.52
TRIM28-205ENST00000595028 THBS3P49746 956 aa11.83□□□□□ -0.52
TRIM28-205ENST00000595028 GNG2P59768 71 aa11.83□□□□□ -0.52
TRIM28-205ENST00000595028 PITPNAQ00169 270 aa11.83□□□□□ -0.52
TRIM28-205ENST00000595028 ZNF260Q3ZCT1 412 aa11.83□□□□□ -0.52
TRIM28-205ENST00000595028 LIN54Q6MZP7 749 aa11.83□□□□□ -0.52
TRIM28-205ENST00000595028 LCNL1Q6ZST4 164 aa11.83□□□□□ -0.52
TRIM28-205ENST00000595028 PDPNQ86YL7 162 aa11.83□□□□□ -0.52
TRIM28-205ENST00000595028 ZNF695Q8IW36 515 aa11.83□□□□□ -0.52
TRIM28-205ENST00000595028 H1FOOQ8IZA3 346 aaPredicted RBP11.83□□□□□ -0.52
TRIM28-205ENST00000595028 LINC00482Q8N8I6 264 aa11.83□□□□□ -0.52
TRIM28-205ENST00000595028 OR8U1Q8NH10 309 aa11.83□□□□□ -0.52
TRIM28-205ENST00000595028 YIPF6Q96EC8 236 aa11.83□□□□□ -0.52
TRIM28-205ENST00000595028 C5orf30Q96GV9 206 aa11.83□□□□□ -0.52
TRIM28-205ENST00000595028 RNF5Q99942 180 aa11.83□□□□□ -0.52
TRIM28-205ENST00000595028 DCSTAMPQ9H295 470 aa11.83□□□□□ -0.52
TRIM28-205ENST00000595028 SDHAF2Q9NX18 166 aa11.83□□□□□ -0.52
TRIM28-205ENST00000595028 TRIM64CA6NLI5 447 aa11.82□□□□□ -0.52
TRIM28-205ENST00000595028 SSX5O60225 188 aa11.82□□□□□ -0.52
TRIM28-205ENST00000595028 TMEM127O75204 238 aa11.82□□□□□ -0.52
TRIM28-205ENST00000595028 SPDEFO95238 335 aa11.82□□□□□ -0.52
TRIM28-205ENST00000595028 PRB2P02812 416 aaPredicted RBP11.82□□□□□ -0.52
TRIM28-205ENST00000595028 IGKV1-16P04430 117 aa11.82□□□□□ -0.52
TRIM28-205ENST00000595028 IGLL1P15814 213 aa11.82□□□□□ -0.52
TRIM28-205ENST00000595028 PSMB8P28062 276 aa11.82□□□□□ -0.52
TRIM28-205ENST00000595028 TGFBR1P36897 503 aa11.82□□□□□ -0.52
TRIM28-205ENST00000595028 LINC00205P59089 165 aa11.82□□□□□ -0.52
TRIM28-205ENST00000595028 PLGLAQ15195 96 aa11.82□□□□□ -0.52
TRIM28-205ENST00000595028 MRPL41Q8IXM3 137 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms