RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 TEX38Q6PEX7 206 aa17.51■□□□□ 0.39
GTF2F1-204ENST00000594965 DRAXINQ8NBI3 349 aaPredicted RBP17.51■□□□□ 0.39
GTF2F1-204ENST00000594965 IGHV7-81A0A0B4J1V7 117 aa17.5■□□□□ 0.39
GTF2F1-204ENST00000594965 BET1O15155 118 aa17.5■□□□□ 0.39
GTF2F1-204ENST00000594965 PF4P02776 101 aa17.5■□□□□ 0.39
GTF2F1-204ENST00000594965 RPLP1P05386 114 aaKnown RBP17.5■□□□□ 0.39
GTF2F1-204ENST00000594965 CD33P20138 364 aa17.5■□□□□ 0.39
GTF2F1-204ENST00000594965 CDNFQ49AH0 187 aa17.5■□□□□ 0.39
GTF2F1-204ENST00000594965 Q6ZS49 121 aa17.5■□□□□ 0.39
GTF2F1-204ENST00000594965 LCNL1Q6ZST4 164 aa17.5■□□□□ 0.39
GTF2F1-204ENST00000594965 ZNF383Q8NA42 475 aa17.5■□□□□ 0.39
GTF2F1-204ENST00000594965 OR5H6Q8NGV6 325 aa17.5■□□□□ 0.39
GTF2F1-204ENST00000594965 RRP9O43818 475 aaKnown RBP17.49■□□□□ 0.39
GTF2F1-204ENST00000594965 DIRAS3O95661 229 aa17.49■□□□□ 0.39
GTF2F1-204ENST00000594965 IGLL1P15814 213 aa17.49■□□□□ 0.39
GTF2F1-204ENST00000594965 MC5RP33032 325 aa17.49■□□□□ 0.39
GTF2F1-204ENST00000594965 C8orf86Q6ZUL3 223 aa17.49■□□□□ 0.39
GTF2F1-204ENST00000594965 RNF152Q8N8N0 203 aa17.49■□□□□ 0.39
GTF2F1-204ENST00000594965 C5orf30Q96GV9 206 aa17.49■□□□□ 0.39
GTF2F1-204ENST00000594965 GON7Q9BXV9 100 aa17.49■□□□□ 0.39
GTF2F1-204ENST00000594965 OR51J1Q9H342 316 aa17.49■□□□□ 0.39
GTF2F1-204ENST00000594965 ZNF221Q9UK13 617 aa17.49■□□□□ 0.39
GTF2F1-204ENST00000594965 WASHC3Q9Y3C0 194 aa17.49■□□□□ 0.39
GTF2F1-204ENST00000594965 NOTCH3Q9UM47 2321 aa17.49■□□□□ 0.39
GTF2F1-204ENST00000594965 TGFBR1P36897 503 aa17.48■□□□□ 0.39
GTF2F1-204ENST00000594965 THBS3P49746 956 aa17.48■□□□□ 0.39
GTF2F1-204ENST00000594965 FOXE3Q13461 319 aa17.48■□□□□ 0.39
GTF2F1-204ENST00000594965 ARL6IP1Q15041 203 aa17.48■□□□□ 0.39
GTF2F1-204ENST00000594965 ZNF260Q3ZCT1 412 aa17.48■□□□□ 0.39
GTF2F1-204ENST00000594965 HACD4Q5VWC8 232 aa17.48■□□□□ 0.39
GTF2F1-204ENST00000594965 LIN54Q6MZP7 749 aa17.48■□□□□ 0.39
GTF2F1-204ENST00000594965 LINC00482Q8N8I6 264 aa17.48■□□□□ 0.39
GTF2F1-204ENST00000594965 TSPAN14Q8NG11 270 aa17.48■□□□□ 0.39
GTF2F1-204ENST00000594965 OR10J5Q8NHC4 309 aa17.48■□□□□ 0.39
GTF2F1-204ENST00000594965 YIPF6Q96EC8 236 aa17.48■□□□□ 0.39
GTF2F1-204ENST00000594965 FBXL15Q9H469 300 aa17.48■□□□□ 0.39
GTF2F1-204ENST00000594965 KIAA1456Q9P272 454 aa17.48■□□□□ 0.39
GTF2F1-204ENST00000594965 GAB2Q9UQC2 676 aa17.48■□□□□ 0.39
GTF2F1-204ENST00000594965 PRKDCP78527 4128 aaKnown RBP17.48■□□□□ 0.39
GTF2F1-204ENST00000594965 H7C2Y5 167 aa17.47■□□□□ 0.39
GTF2F1-204ENST00000594965 RRHO14718 337 aa17.47■□□□□ 0.39
GTF2F1-204ENST00000594965 ATP6V0E1O15342 81 aa17.47■□□□□ 0.39
GTF2F1-204ENST00000594965 IGHG4P01861 327 aa17.47■□□□□ 0.39
GTF2F1-204ENST00000594965 PRB2P02812 416 aaPredicted RBP17.47■□□□□ 0.39
GTF2F1-204ENST00000594965 ELANEP08246 267 aa17.47■□□□□ 0.39
GTF2F1-204ENST00000594965 OR8U9P0C7N5 309 aa17.47■□□□□ 0.39
GTF2F1-204ENST00000594965 VDAC1P21796 283 aa17.47■□□□□ 0.39
GTF2F1-204ENST00000594965 DTYMKP23919 212 aa17.47■□□□□ 0.39
GTF2F1-204ENST00000594965 PPIFP30405 207 aaKnown RBP17.47■□□□□ 0.39
GTF2F1-204ENST00000594965 TALDO1P37837 337 aa17.47■□□□□ 0.39
GTF2F1-204ENST00000594965 NDPQ00604 133 aa17.47■□□□□ 0.39
GTF2F1-204ENST00000594965 IDNKQ5T6J7 187 aa17.47■□□□□ 0.39
GTF2F1-204ENST00000594965 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.47■□□□□ 0.39
GTF2F1-204ENST00000594965 KLHL30-AS1Q8NEE0 82 aa17.47■□□□□ 0.39
GTF2F1-204ENST00000594965 OR8U1Q8NH10 309 aa17.47■□□□□ 0.39
GTF2F1-204ENST00000594965 SLC25A38Q96DW6 304 aa17.47■□□□□ 0.39
GTF2F1-204ENST00000594965 SDHAF2Q9NX18 166 aa17.47■□□□□ 0.39
GTF2F1-204ENST00000594965 RHBDL2Q9NX52 303 aa17.47■□□□□ 0.39
GTF2F1-204ENST00000594965 DNAH3Q8TD57 4116 aa17.46■□□□□ 0.39
GTF2F1-204ENST00000594965 A0A087WXM4 84 aa17.46■□□□□ 0.39
GTF2F1-204ENST00000594965 TMEM235A6NFC5 223 aa17.46■□□□□ 0.39
GTF2F1-204ENST00000594965 G3V318 75 aa17.46■□□□□ 0.39
GTF2F1-204ENST00000594965 RBBP9O75884 186 aa17.46■□□□□ 0.39
GTF2F1-204ENST00000594965 TNFAIP8O95379 198 aa17.46■□□□□ 0.39
GTF2F1-204ENST00000594965 IGKV1-16P04430 117 aa17.46■□□□□ 0.39
GTF2F1-204ENST00000594965 TFAP2AP05549 437 aa17.46■□□□□ 0.39
GTF2F1-204ENST00000594965 GSTP1P09211 210 aaKnown RBP17.46■□□□□ 0.39
GTF2F1-204ENST00000594965 CXorf66Q5JRM2 361 aaPredicted RBP17.46■□□□□ 0.39
GTF2F1-204ENST00000594965 ZNF695Q8IW36 515 aa17.46■□□□□ 0.39
GTF2F1-204ENST00000594965 MRPL41Q8IXM3 137 aaKnown RBP17.46■□□□□ 0.39
GTF2F1-204ENST00000594965 H1FOOQ8IZA3 346 aaPredicted RBP17.46■□□□□ 0.39
GTF2F1-204ENST00000594965 NUDCD2Q8WVJ2 157 aa17.46■□□□□ 0.39
GTF2F1-204ENST00000594965 RNF5Q99942 180 aa17.46■□□□□ 0.39
GTF2F1-204ENST00000594965 OR2D2Q9H210 308 aa17.46■□□□□ 0.39
GTF2F1-204ENST00000594965 FBXO7Q9Y3I1 522 aa17.46■□□□□ 0.39
GTF2F1-204ENST00000594965 WSB1Q9Y6I7 421 aa17.46■□□□□ 0.39
GTF2F1-204ENST00000594965 NUDT19A8MXV4 375 aa17.45■□□□□ 0.38
GTF2F1-204ENST00000594965 M0R1X1 148 aa17.45■□□□□ 0.38
GTF2F1-204ENST00000594965 FCN1O00602 326 aa17.45■□□□□ 0.38
GTF2F1-204ENST00000594965 SSX5O60225 188 aa17.45■□□□□ 0.38
GTF2F1-204ENST00000594965 PSMB8P28062 276 aa17.45■□□□□ 0.38
GTF2F1-204ENST00000594965 SLC6A1P30531 599 aa17.45■□□□□ 0.38
GTF2F1-204ENST00000594965 SCAND1P57086 179 aa17.45■□□□□ 0.38
GTF2F1-204ENST00000594965 P2RX4Q99571 388 aa17.45■□□□□ 0.38
GTF2F1-204ENST00000594965 PARP11Q9NR21 331 aa17.45■□□□□ 0.38
GTF2F1-204ENST00000594965 ETV7Q9Y603 341 aa17.45■□□□□ 0.38
GTF2F1-204ENST00000594965 TRIM64CA6NLI5 447 aa17.44■□□□□ 0.38
GTF2F1-204ENST00000594965 SCGNO76038 276 aa17.44■□□□□ 0.38
GTF2F1-204ENST00000594965 CDX1P47902 265 aaPredicted RBP17.44■□□□□ 0.38
GTF2F1-204ENST00000594965 PSG5Q15238 335 aa17.44■□□□□ 0.38
GTF2F1-204ENST00000594965 FOXB2Q5VYV0 432 aa17.44■□□□□ 0.38
GTF2F1-204ENST00000594965 MYOZ3Q8TDC0 251 aa17.44■□□□□ 0.38
GTF2F1-204ENST00000594965 DUX3Q96PT4 197 aa17.44■□□□□ 0.38
GTF2F1-204ENST00000594965 ST6GALNAC5Q9BVH7 336 aa17.44■□□□□ 0.38
GTF2F1-204ENST00000594965 DCSTAMPQ9H295 470 aa17.44■□□□□ 0.38
GTF2F1-204ENST00000594965 IGLV1-40P01703 118 aa17.43■□□□□ 0.38
GTF2F1-204ENST00000594965 MYCNOSP40205 109 aa17.43■□□□□ 0.38
GTF2F1-204ENST00000594965 KIAA0141Q14154 515 aaPredicted RBP17.43■□□□□ 0.38
GTF2F1-204ENST00000594965 C19orf54Q5BKX5 351 aa17.43■□□□□ 0.38
GTF2F1-204ENST00000594965 ZNF660Q6AZW8 331 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms