RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 C8orf31Q8N9H6 132 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 CLDND2Q8NHS1 167 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 CT45A3Q8NHU0 189 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 OR2D2Q9H210 308 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 NARFLQ9H6Q4 476 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 KCNS2Q9ULS6 477 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 PSG11Q9UQ72 335 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 hCG_1809904A0A1W2PP81 198 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 A0A1W2PPE2 198 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 A0A1W2PR64 198 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 A0A1W2PRV1 198 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 A8MXK9 166 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 RNF223E7ERA6 249 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 PHF1O43189 567 aaPredicted RBP11.02□□□□□ -0.65
VMP1-217ENST00000593168 OR2A4O95047 310 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 OR5AC1P0C628 307 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 IGHV1-8P0DP01 117 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 F2RP25116 425 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 SRPXP78539 464 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 CD83Q01151 205 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 EIF4EBP1Q13541 118 aaPredicted RBP11.02□□□□□ -0.65
VMP1-217ENST00000593168 C2orf68Q2NKX9 166 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 ANKRD55Q3KP44 614 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 ZNF66Q6ZN08 573 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 LIAT1Q6ZQX7 453 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 TCTE3Q8IZS6 198 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.02□□□□□ -0.65
VMP1-217ENST00000593168 GLYATL2Q8WU03 294 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 ASB13Q8WXK3 278 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 MSI2Q96DH6 328 aaKnown RBP11.02□□□□□ -0.65
VMP1-217ENST00000593168 ABHD14BQ96IU4 210 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 OR2A7Q96R45 310 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 ABHD14AQ9BUJ0 271 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 ZNF436Q9C0F3 470 aaPredicted RBP11.02□□□□□ -0.65
VMP1-217ENST00000593168 IFI27L2Q9H2X8 130 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 RANGRFQ9HD47 186 aaPredicted RBP11.02□□□□□ -0.65
VMP1-217ENST00000593168 SDHAF2Q9NX18 166 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 SESN1Q9Y6P5 492 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 NBEAL1Q6ZS30 2694 aa11.02□□□□□ -0.65
VMP1-217ENST00000593168 A8MV72 311 aaPredicted RBP11.01□□□□□ -0.65
VMP1-217ENST00000593168 H0Y980 276 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 UCP1P25874 307 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 GPR12P47775 334 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 ERVFRD-1P60508 538 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 CD300CQ08708 224 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 CLEC12BQ2HXU8 276 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 SP6Q3SY56 376 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 UTF1Q5T230 341 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 LIN54Q6MZP7 749 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 C1orf122Q6ZSJ8 110 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 SLC25A48Q6ZT89 311 aaKnown RBP11.01□□□□□ -0.65
VMP1-217ENST00000593168 LGI3Q8N145 548 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 LINC00311Q8N616 119 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 OR5M8Q8NGP6 311 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 ZNF596Q8TC21 504 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 TMEM56Q96MV1 263 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 TP53RKQ96S44 253 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 TMEM222Q9H0R3 208 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 RAB18Q9NP72 206 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 FAM212BQ9NTI7 297 aaPredicted RBP11.01□□□□□ -0.65
VMP1-217ENST00000593168 PIPOXQ9P0Z9 390 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 TMEM56-RWDD3S4R434 201 aa11.01□□□□□ -0.65
VMP1-217ENST00000593168 PIGBOS1A0A0B4J2F0 54 aa11□□□□□ -0.65
VMP1-217ENST00000593168 M0R1W7 72 aa11□□□□□ -0.65
VMP1-217ENST00000593168 GOSR2O14653 212 aa11□□□□□ -0.65
VMP1-217ENST00000593168 RAB29O14966 203 aa11□□□□□ -0.65
VMP1-217ENST00000593168 SLC31A2O15432 143 aa11□□□□□ -0.65
VMP1-217ENST00000593168 TNFSF12O43508 249 aa11□□□□□ -0.65
VMP1-217ENST00000593168 ENSAO43768 121 aaKnown RBP11□□□□□ -0.65
VMP1-217ENST00000593168 PROP1O75360 226 aa11□□□□□ -0.65
VMP1-217ENST00000593168 FOXH1O75593 365 aa11□□□□□ -0.65
VMP1-217ENST00000593168 CDS2O95674 445 aa11□□□□□ -0.65
VMP1-217ENST00000593168 GIPP09681 153 aaPredicted RBP11□□□□□ -0.65
VMP1-217ENST00000593168 ZFP36P26651 326 aaKnown RBP11□□□□□ -0.65
VMP1-217ENST00000593168 SRSF4Q08170 494 aaKnown RBP11□□□□□ -0.65
VMP1-217ENST00000593168 CATR1Q13166 79 aa11□□□□□ -0.65
VMP1-217ENST00000593168 TCTEX1D1Q8N7M0 179 aa11□□□□□ -0.65
VMP1-217ENST00000593168 OR9G1Q8NH87 305 aa11□□□□□ -0.65
VMP1-217ENST00000593168 TNFRSF14Q92956 283 aa11□□□□□ -0.65
VMP1-217ENST00000593168 LEAP2Q969E1 77 aa11□□□□□ -0.65
VMP1-217ENST00000593168 IL22RA2Q969J5 263 aa11□□□□□ -0.65
VMP1-217ENST00000593168 C5orf30Q96GV9 206 aa11□□□□□ -0.65
VMP1-217ENST00000593168 FYTTD1Q96QD9 318 aaKnown RBP11□□□□□ -0.65
VMP1-217ENST00000593168 HSD17B10Q99714 261 aaKnown RBP11□□□□□ -0.65
VMP1-217ENST00000593168 TMEM133Q9H2Q1 129 aa11□□□□□ -0.65
VMP1-217ENST00000593168 LIN7CQ9NUP9 197 aaKnown RBP11□□□□□ -0.65
VMP1-217ENST00000593168 POLR3KQ9Y2Y1 108 aaPredicted RBP11□□□□□ -0.65
VMP1-217ENST00000593168 IGHV4-30-2A0A087WSY4 118 aa10.99□□□□□ -0.65
VMP1-217ENST00000593168 J3QR06 171 aa10.99□□□□□ -0.65
VMP1-217ENST00000593168 IGHV3-7P01780 117 aa10.99□□□□□ -0.65
VMP1-217ENST00000593168 HNRNPCP07910 306 aaKnown RBP eCLIP10.99□□□□□ -0.65
VMP1-217ENST00000593168 SLC25A16P16260 332 aa10.99□□□□□ -0.65
VMP1-217ENST00000593168 GNG10P50151 68 aa10.99□□□□□ -0.65
VMP1-217ENST00000593168 RAP2BP61225 183 aa10.99□□□□□ -0.65
VMP1-217ENST00000593168 KIR3DL3Q8N743 410 aa10.99□□□□□ -0.65
VMP1-217ENST00000593168 OR51H1Q8NH63 302 aa10.99□□□□□ -0.65
VMP1-217ENST00000593168 TMEM158Q8WZ71 300 aa10.99□□□□□ -0.65
VMP1-217ENST00000593168 GPHA2Q96T91 129 aa10.99□□□□□ -0.65
VMP1-217ENST00000593168 REG4Q9BYZ8 158 aa10.99□□□□□ -0.65
VMP1-217ENST00000593168 YAE1D1Q9NRH1 226 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms