RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 OR2W1Q9Y3N9 320 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 RNF115Q9Y4L5 304 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 TNRC18O15417 2968 aaPredicted RBP12.13□□□□□ -0.47
CIRBP-242ENST00000593093 FREM2Q5SZK8 3169 aa12.13□□□□□ -0.47
CIRBP-242ENST00000593093 NAPSAO96009 420 aa12.13□□□□□ -0.47
CIRBP-242ENST00000593093 KITLGP21583 273 aa12.13□□□□□ -0.47
CIRBP-242ENST00000593093 TFF3Q07654 80 aa12.13□□□□□ -0.47
CIRBP-242ENST00000593093 HIST3H3Q16695 136 aa12.13□□□□□ -0.47
CIRBP-242ENST00000593093 FAM53AQ6NSI3 398 aaPredicted RBP12.13□□□□□ -0.47
CIRBP-242ENST00000593093 ZIC4Q8N9L1 334 aa12.13□□□□□ -0.47
CIRBP-242ENST00000593093 WDR61Q9GZS3 305 aaKnown RBP12.13□□□□□ -0.47
CIRBP-242ENST00000593093 MDFIC2A0A1B0GVS7 189 aa12.13□□□□□ -0.47
CIRBP-242ENST00000593093 DEGS1O15121 323 aa12.13□□□□□ -0.47
CIRBP-242ENST00000593093 VAMP5O95183 116 aa12.13□□□□□ -0.47
CIRBP-242ENST00000593093 CTSSP25774 331 aa12.13□□□□□ -0.47
CIRBP-242ENST00000593093 IL3RAP26951 378 aa12.13□□□□□ -0.47
CIRBP-242ENST00000593093 TMEM108Q6UXF1 575 aa12.13□□□□□ -0.47
CIRBP-242ENST00000593093 NEIL1Q96FI4 390 aaPredicted RBP12.13□□□□□ -0.47
CIRBP-242ENST00000593093 MTCH1Q9NZJ7 389 aa12.13□□□□□ -0.47
CIRBP-242ENST00000593093 PRR14LQ5THK1 2151 aa12.13□□□□□ -0.47
CIRBP-242ENST00000593093 H0Y980 276 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 GLB1P16278 677 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 BRS3P32247 399 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 KIAA1644Q3SXP7 199 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 GUSBP11Q6P575 273 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 SLC25A45Q8N413 288 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 OR5D13Q8NGL4 314 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 TMEM170AQ8WVE7 144 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 ZDHHC16Q969W1 377 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 ALKBH7Q9BT30 221 aaPredicted RBP12.12□□□□□ -0.47
CIRBP-242ENST00000593093 UBE2ZQ9H832 354 aaPredicted RBP12.12□□□□□ -0.47
CIRBP-242ENST00000593093 OR6C3Q9NZP0 311 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 CIDEAO60543 219 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 ATP5G3P48201 142 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 LINC00205P59089 165 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 HAPLN4Q86UW8 402 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 PINX1Q96BK5 328 aaKnown RBP12.12□□□□□ -0.47
CIRBP-242ENST00000593093 VAMP8Q9BV40 100 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 hCG_38984A0A1B0GV85 526 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 ITGB1BP1O14713 200 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 SLC25A6P12236 298 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 PMCHP20382 165 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 OR10P1Q8NGE3 313 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 ABCA1O95477 2261 aa12.12□□□□□ -0.47
CIRBP-242ENST00000593093 EP300Q09472 2414 aaPredicted RBP12.12□□□□□ -0.47
CIRBP-242ENST00000593093 EML6Q6ZMW3 1958 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 DUXBA0A1W2PPF3 345 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 OR6C6A6NF89 314 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 DEFB108AA8MXU0 73 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 MRPL33O75394 65 aaKnown RBP12.11□□□□□ -0.47
CIRBP-242ENST00000593093 CRYABP02511 175 aaKnown RBP12.11□□□□□ -0.47
CIRBP-242ENST00000593093 CA6P23280 308 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 OR10J1P30954 320 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 OTX2P32243 289 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 LRRC75BQ2VPJ9 315 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 COL5A1-AS1Q5SY13 56 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 RFESDQ8TAC1 157 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 C10orf35Q96D05 121 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 TXN2Q99757 166 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 HINT2Q9BX68 163 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 ZNF552Q9H707 407 aaPredicted RBP12.11□□□□□ -0.47
CIRBP-242ENST00000593093 CHCHD2Q9Y6H1 151 aaPredicted RBP12.11□□□□□ -0.47
CIRBP-242ENST00000593093 ATP23Q9Y6H3 246 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 ATG2AQ2TAZ0 1938 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 SLC17A3O00476 420 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 COX5AP20674 150 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 NTF3P20783 257 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 CCKARP32238 428 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 CDC34P49427 236 aaPredicted RBP12.11□□□□□ -0.47
CIRBP-242ENST00000593093 C10orf128Q5T292 105 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 ABLIM2Q6H8Q1 611 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 RPS19BP1Q86WX3 136 aaKnown RBP12.11□□□□□ -0.47
CIRBP-242ENST00000593093 CXorf67Q86X51 503 aaPredicted RBP12.11□□□□□ -0.47
CIRBP-242ENST00000593093 ATOH7Q8N100 152 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 ACY3Q96HD9 319 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 CCL25O15444 150 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 CRYGSP22914 178 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 OTX1P32242 354 aaPredicted RBP12.11□□□□□ -0.47
CIRBP-242ENST00000593093 TCL1AP56279 114 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 FGFRL1Q8N441 504 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 NUDT10Q8NFP7 164 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 SVIPQ8NHG7 77 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 TMEM54Q969K7 222 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 TMEM242Q9NWH2 141 aa12.11□□□□□ -0.47
CIRBP-242ENST00000593093 SPTBN2O15020 2390 aa12.1□□□□□ -0.47
CIRBP-242ENST00000593093 IGHV3-43A0A0B4J1X8 118 aa12.1□□□□□ -0.47
CIRBP-242ENST00000593093 IGHV3-43DP0DP04 118 aa12.1□□□□□ -0.47
CIRBP-242ENST00000593093 GDF1P27539 372 aa12.1□□□□□ -0.47
CIRBP-242ENST00000593093 SSR4P51571 173 aa12.1□□□□□ -0.47
CIRBP-242ENST00000593093 CLDN15P56746 228 aa12.1□□□□□ -0.47
CIRBP-242ENST00000593093 SERF2P84101 59 aa12.1□□□□□ -0.47
CIRBP-242ENST00000593093 NUDT11Q96G61 164 aa12.1□□□□□ -0.47
CIRBP-242ENST00000593093 P2RX4Q99571 388 aa12.1□□□□□ -0.47
CIRBP-242ENST00000593093 PHF7Q9BWX1 381 aaPredicted RBP12.1□□□□□ -0.47
CIRBP-242ENST00000593093 C11orf1Q9H5F2 150 aa12.1□□□□□ -0.47
CIRBP-242ENST00000593093 OCIAD1Q9NX40 245 aa12.1□□□□□ -0.47
CIRBP-242ENST00000593093 A0A0G2JMM0 328 aa12.1□□□□□ -0.47
CIRBP-242ENST00000593093 A0A1W2PPB8 328 aa12.1□□□□□ -0.47
CIRBP-242ENST00000593093 A0A1W2PRS3 328 aa12.1□□□□□ -0.47
CIRBP-242ENST00000593093 KIR3DP1A8MWS1 328 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms