RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 PARLQ9H300 379 aa12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 MBNL3Q9NUK0 354 aaKnown RBP12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 TMEM210A6NLX4 147 aa12.53□□□□□ -0.4
SMARCA4-219ENST00000592604 RNF212BA8MTL3 300 aa12.53□□□□□ -0.4
SMARCA4-219ENST00000592604 A8MWP6 167 aa12.53□□□□□ -0.4
SMARCA4-219ENST00000592604 WDR1O75083 606 aa12.53□□□□□ -0.4
SMARCA4-219ENST00000592604 SERPINA7P05543 415 aa12.53□□□□□ -0.4
SMARCA4-219ENST00000592604 WNT5AP41221 380 aa12.53□□□□□ -0.4
SMARCA4-219ENST00000592604 SRYQ05066 204 aa12.53□□□□□ -0.4
SMARCA4-219ENST00000592604 OR8G2PQ6IF36 304 aa12.53□□□□□ -0.4
SMARCA4-219ENST00000592604 RPUSD4Q96CM3 377 aaKnown RBP12.53□□□□□ -0.4
SMARCA4-219ENST00000592604 MANBALQ9NQG1 85 aa12.53□□□□□ -0.4
SMARCA4-219ENST00000592604 KCNS2Q9ULS6 477 aa12.53□□□□□ -0.4
SMARCA4-219ENST00000592604 WIPI2Q9Y4P8 454 aa12.53□□□□□ -0.4
SMARCA4-219ENST00000592604 A0A1W2PR80 420 aa12.53□□□□□ -0.4
SMARCA4-219ENST00000592604 XKRY2A2RUG3 117 aa12.53□□□□□ -0.4
SMARCA4-219ENST00000592604 HRASP01112 189 aa12.53□□□□□ -0.4
SMARCA4-219ENST00000592604 GCGP01275 180 aa12.53□□□□□ -0.4
SMARCA4-219ENST00000592604 FAM180AQ6UWF9 173 aa12.53□□□□□ -0.4
SMARCA4-219ENST00000592604 NOL4LQ96MY1 436 aaPredicted RBP12.53□□□□□ -0.4
SMARCA4-219ENST00000592604 TRAPPC2LQ9UL33 140 aa12.53□□□□□ -0.4
SMARCA4-219ENST00000592604 CLDN1O95832 211 aa12.52□□□□□ -0.4
SMARCA4-219ENST00000592604 P0C879 139 aa12.52□□□□□ -0.4
SMARCA4-219ENST00000592604 SPINK2P20155 84 aa12.52□□□□□ -0.4
SMARCA4-219ENST00000592604 ERVS71-1P61550 626 aa12.52□□□□□ -0.4
SMARCA4-219ENST00000592604 ZNF66Q6ZN08 573 aa12.52□□□□□ -0.4
SMARCA4-219ENST00000592604 NECAP1Q8NC96 275 aa12.52□□□□□ -0.4
SMARCA4-219ENST00000592604 TMEM147Q9BVK8 224 aa12.52□□□□□ -0.4
SMARCA4-219ENST00000592604 MED12LQ86YW9 2145 aa12.52□□□□□ -0.4
SMARCA4-219ENST00000592604 PMS2P5A8MQ11 134 aa12.52□□□□□ -0.41
SMARCA4-219ENST00000592604 GGCTO75223 188 aaKnown RBP12.52□□□□□ -0.41
SMARCA4-219ENST00000592604 OR2H2O95918 312 aa12.52□□□□□ -0.41
SMARCA4-219ENST00000592604 CA6P23280 308 aa12.52□□□□□ -0.41
SMARCA4-219ENST00000592604 ZNF664Q8N3J9 261 aa12.52□□□□□ -0.41
SMARCA4-219ENST00000592604 APH1AQ96BI3 265 aa12.52□□□□□ -0.41
SMARCA4-219ENST00000592604 PCGF1Q9BSM1 259 aa12.52□□□□□ -0.41
SMARCA4-219ENST00000592604 VENTXO95231 258 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 SYNGR4O95473 234 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 TYMSP04818 313 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 DUSP3P51452 185 aaPredicted RBP12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 ERVK11-1P61568 191 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 SPINK14Q6IE38 97 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 ZBTB34Q8NCN2 500 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 OR10G9Q8NGN4 311 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 OR10G7Q8NGN6 311 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 ZNF703Q9H7S9 590 aaPredicted RBP12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 SLC25A22Q9H936 323 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 KMT2EQ8IZD2 1858 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 PCSK5Q92824 1860 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 SIRPB1O00241 398 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 ACTL10Q5JWF8 245 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 Q8IYB0 196 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 TDHQ8IZJ6 230 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 OR4F5Q8NH21 305 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 OR4F4Q96R69 305 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 FAM173AQ9BQD7 235 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 ELOVL1Q9BW60 279 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 TUBG1P23258 451 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 SRP14P37108 136 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 P2RY6Q15077 328 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 MSMO1Q15800 293 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 BEND2Q8NDZ0 799 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 OR2M7Q8NG81 312 aa12.51□□□□□ -0.41
SMARCA4-219ENST00000592604 CELA3AP09093 270 aa12.5□□□□□ -0.41
SMARCA4-219ENST00000592604 NPSP0C0P6 89 aa12.5□□□□□ -0.41
SMARCA4-219ENST00000592604 PLA2G5P39877 138 aa12.5□□□□□ -0.41
SMARCA4-219ENST00000592604 VHLLQ6RSH7 139 aa12.5□□□□□ -0.41
SMARCA4-219ENST00000592604 OR2T10Q8NGZ9 312 aa12.5□□□□□ -0.41
SMARCA4-219ENST00000592604 LRRC30A6NM36 301 aa12.5□□□□□ -0.41
SMARCA4-219ENST00000592604 HMGB3O15347 200 aaKnown RBP12.5□□□□□ -0.41
SMARCA4-219ENST00000592604 COX5AP20674 150 aa12.5□□□□□ -0.41
SMARCA4-219ENST00000592604 RTP5Q14D33 572 aa12.5□□□□□ -0.41
SMARCA4-219ENST00000592604 ACOT6Q3I5F7 207 aaPredicted RBP12.5□□□□□ -0.41
SMARCA4-219ENST00000592604 CISD2Q8N5K1 135 aaKnown RBP12.5□□□□□ -0.41
SMARCA4-219ENST00000592604 ZNF645Q8N7E2 425 aa12.5□□□□□ -0.41
SMARCA4-219ENST00000592604 UBALD1Q8TB05 177 aa12.5□□□□□ -0.41
SMARCA4-219ENST00000592604 GATAD1Q8WUU5 269 aa12.5□□□□□ -0.41
SMARCA4-219ENST00000592604 NDUFAF3Q9BU61 184 aa12.5□□□□□ -0.41
SMARCA4-219ENST00000592604 GP6Q9HCN6 339 aa12.5□□□□□ -0.41
SMARCA4-219ENST00000592604 OR6C3Q9NZP0 311 aa12.5□□□□□ -0.41
SMARCA4-219ENST00000592604 ARHGAP21Q5T5U3 1957 aa12.49□□□□□ -0.41
SMARCA4-219ENST00000592604 DIDO1Q9BTC0 2240 aaKnown RBP12.49□□□□□ -0.41
SMARCA4-219ENST00000592604 A0A1W2PPQ1 181 aa12.49□□□□□ -0.41
SMARCA4-219ENST00000592604 GYPAP02724 150 aa12.49□□□□□ -0.41
SMARCA4-219ENST00000592604 SNRPCP09234 159 aaKnown RBP12.49□□□□□ -0.41
SMARCA4-219ENST00000592604 EIF4EBP1Q13541 118 aaPredicted RBP12.49□□□□□ -0.41
SMARCA4-219ENST00000592604 ZNF146Q15072 292 aa12.49□□□□□ -0.41
SMARCA4-219ENST00000592604 VWC2Q2TAL6 325 aa12.49□□□□□ -0.41
SMARCA4-219ENST00000592604 WDR86Q86TI4 376 aa12.49□□□□□ -0.41
SMARCA4-219ENST00000592604 NEIL1Q96FI4 390 aaPredicted RBP12.49□□□□□ -0.41
SMARCA4-219ENST00000592604 RTL8AQ9BWD3 113 aa12.49□□□□□ -0.41
SMARCA4-219ENST00000592604 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.49□□□□□ -0.41
SMARCA4-219ENST00000592604 SIT1Q9Y3P8 196 aa12.49□□□□□ -0.41
SMARCA4-219ENST00000592604 NEURL1O76050 574 aa12.49□□□□□ -0.41
SMARCA4-219ENST00000592604 CFIP05156 583 aa12.49□□□□□ -0.41
SMARCA4-219ENST00000592604 IGFBP7Q16270 282 aa12.49□□□□□ -0.41
SMARCA4-219ENST00000592604 FFAR4Q5NUL3 377 aa12.49□□□□□ -0.41
SMARCA4-219ENST00000592604 RPH3ALQ9UNE2 315 aa12.49□□□□□ -0.41
SMARCA4-219ENST00000592604 RAMP3O60896 148 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 IL18BPO95998 194 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms