RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 PARP11Q9NR21 331 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 TXNL4BQ9NX01 149 aaKnown RBP10.86□□□□□ -0.67
APOC1-208ENST00000592535 RDH8Q9NYR8 311 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 KIAA1456Q9P272 454 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 WSB1Q9Y6I7 421 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 H7C2Y5 167 aa10.85□□□□□ -0.67
APOC1-208ENST00000592535 FABP7O15540 132 aa10.85□□□□□ -0.67
APOC1-208ENST00000592535 OR5H8P0DN80 308 aa10.85□□□□□ -0.67
APOC1-208ENST00000592535 HIST1H1DP16402 221 aaKnown RBP10.85□□□□□ -0.67
APOC1-208ENST00000592535 GADD45AP24522 165 aa10.85□□□□□ -0.67
APOC1-208ENST00000592535 PSMB8P28062 276 aa10.85□□□□□ -0.67
APOC1-208ENST00000592535 PPIFP30405 207 aaKnown RBP10.85□□□□□ -0.67
APOC1-208ENST00000592535 HOXD3P31249 432 aaPredicted RBP10.85□□□□□ -0.67
APOC1-208ENST00000592535 FGF9P31371 208 aaPredicted RBP10.85□□□□□ -0.67
APOC1-208ENST00000592535 MC5RP33032 325 aa10.85□□□□□ -0.67
APOC1-208ENST00000592535 CDX1P47902 265 aaPredicted RBP10.85□□□□□ -0.67
APOC1-208ENST00000592535 LINC00205P59089 165 aa10.85□□□□□ -0.67
APOC1-208ENST00000592535 LIN54Q6MZP7 749 aa10.85□□□□□ -0.67
APOC1-208ENST00000592535 ZNF773Q6PK81 442 aa10.85□□□□□ -0.67
APOC1-208ENST00000592535 DRAXINQ8NBI3 349 aaPredicted RBP10.85□□□□□ -0.67
APOC1-208ENST00000592535 TSPAN14Q8NG11 270 aa10.85□□□□□ -0.67
APOC1-208ENST00000592535 OR5AN1Q8NGI8 311 aa10.85□□□□□ -0.67
APOC1-208ENST00000592535 OR4A4PQ8NGN8 299 aa10.85□□□□□ -0.67
APOC1-208ENST00000592535 MAFIPQ8WZ33 124 aa10.85□□□□□ -0.67
APOC1-208ENST00000592535 FBXL15Q9H469 300 aa10.85□□□□□ -0.67
APOC1-208ENST00000592535 STUB1Q9UNE7 303 aa10.85□□□□□ -0.67
APOC1-208ENST00000592535 WASHC3Q9Y3C0 194 aa10.85□□□□□ -0.67
APOC1-208ENST00000592535 A0A087WXM4 84 aa10.84□□□□□ -0.67
APOC1-208ENST00000592535 CCL24O00175 119 aa10.84□□□□□ -0.67
APOC1-208ENST00000592535 RRHO14718 337 aa10.84□□□□□ -0.67
APOC1-208ENST00000592535 BET1O15155 118 aa10.84□□□□□ -0.67
APOC1-208ENST00000592535 GSTP1P09211 210 aaKnown RBP10.84□□□□□ -0.67
APOC1-208ENST00000592535 GSTT2P0CG29 244 aa10.84□□□□□ -0.67
APOC1-208ENST00000592535 GSTT2BP0CG30 244 aa10.84□□□□□ -0.67
APOC1-208ENST00000592535 KRTAP10-11P60412 298 aa10.84□□□□□ -0.67
APOC1-208ENST00000592535 NDPQ00604 133 aa10.84□□□□□ -0.67
APOC1-208ENST00000592535 IGSF11Q5DX21 431 aa10.84□□□□□ -0.67
APOC1-208ENST00000592535 ZNF383Q8NA42 475 aa10.84□□□□□ -0.67
APOC1-208ENST00000592535 CHCHD6Q9BRQ6 235 aa10.84□□□□□ -0.67
APOC1-208ENST00000592535 CABLES2Q9BTV7 478 aa10.84□□□□□ -0.67
APOC1-208ENST00000592535 ATG5Q9H1Y0 275 aa10.84□□□□□ -0.67
APOC1-208ENST00000592535 ZNF230Q9UIE0 474 aaPredicted RBP10.84□□□□□ -0.67
APOC1-208ENST00000592535 ZNF221Q9UK13 617 aa10.84□□□□□ -0.67
APOC1-208ENST00000592535 FBXO7Q9Y3I1 522 aa10.84□□□□□ -0.67
APOC1-208ENST00000592535 TRAV41A0A0B4J266 112 aa10.83□□□□□ -0.68
APOC1-208ENST00000592535 METTL21EPA6NDL7 271 aa10.83□□□□□ -0.68
APOC1-208ENST00000592535 NOTOA8MTQ0 251 aa10.83□□□□□ -0.68
APOC1-208ENST00000592535 K7EIL1 84 aa10.83□□□□□ -0.68
APOC1-208ENST00000592535 RBBP9O75884 186 aa10.83□□□□□ -0.68
APOC1-208ENST00000592535 SNRPBP14678 240 aaKnown RBP10.83□□□□□ -0.68
APOC1-208ENST00000592535 SERPINB10P48595 397 aa10.83□□□□□ -0.68
APOC1-208ENST00000592535 RAB25P57735 213 aa10.83□□□□□ -0.68
APOC1-208ENST00000592535 ARFRP1Q13795 201 aa10.83□□□□□ -0.68
APOC1-208ENST00000592535 KIR2DS1Q14954 304 aa10.83□□□□□ -0.68
APOC1-208ENST00000592535 PLGLAQ15195 96 aa10.83□□□□□ -0.68
APOC1-208ENST00000592535 OR8U1Q8NH10 309 aa10.83□□□□□ -0.68
APOC1-208ENST00000592535 MYOZ3Q8TDC0 251 aa10.83□□□□□ -0.68
APOC1-208ENST00000592535 C4orf3Q8WVX3 66 aa10.83□□□□□ -0.68
APOC1-208ENST00000592535 MCRIP2Q9BUT9 160 aaKnown RBP10.83□□□□□ -0.68
APOC1-208ENST00000592535 GPR61Q9BZJ8 451 aa10.83□□□□□ -0.68
APOC1-208ENST00000592535 TOLLIPQ9H0E2 274 aa10.83□□□□□ -0.68
APOC1-208ENST00000592535 OR51E2Q9H255 320 aa10.83□□□□□ -0.68
APOC1-208ENST00000592535 KLK15Q9H2R5 256 aa10.83□□□□□ -0.68
APOC1-208ENST00000592535 ELF5Q9UKW6 265 aaPredicted RBP10.83□□□□□ -0.68
APOC1-208ENST00000592535 SSR3Q9UNL2 185 aa10.83□□□□□ -0.68
APOC1-208ENST00000592535 IGKV1D-8A0A087WSZ0 117 aa10.82□□□□□ -0.68
APOC1-208ENST00000592535 TRBV6-7A0A0A0MS04 114 aa10.82□□□□□ -0.68
APOC1-208ENST00000592535 M0R1X1 148 aa10.82□□□□□ -0.68
APOC1-208ENST00000592535 FCN1O00602 326 aa10.82□□□□□ -0.68
APOC1-208ENST00000592535 IGLV1-40P01703 118 aa10.82□□□□□ -0.68
APOC1-208ENST00000592535 TFAP2AP05549 437 aa10.82□□□□□ -0.68
APOC1-208ENST00000592535 OR8U9P0C7N5 309 aa10.82□□□□□ -0.68
APOC1-208ENST00000592535 CX3CL1P78423 397 aa10.82□□□□□ -0.68
APOC1-208ENST00000592535 EGFEM1PQ0D2K5 195 aa10.82□□□□□ -0.68
APOC1-208ENST00000592535 KIAA0141Q14154 515 aaPredicted RBP10.82□□□□□ -0.68
APOC1-208ENST00000592535 ECSCRQ19T08 205 aa10.82□□□□□ -0.68
APOC1-208ENST00000592535 C19orf54Q5BKX5 351 aa10.82□□□□□ -0.68
APOC1-208ENST00000592535 ZNF660Q6AZW8 331 aaPredicted RBP10.82□□□□□ -0.68
APOC1-208ENST00000592535 TPRA1Q86W33 373 aa10.82□□□□□ -0.68
APOC1-208ENST00000592535 OR10J5Q8NHC4 309 aa10.82□□□□□ -0.68
APOC1-208ENST00000592535 DPF1Q92782 380 aa10.82□□□□□ -0.68
APOC1-208ENST00000592535 RNF5Q99942 180 aa10.82□□□□□ -0.68
APOC1-208ENST00000592535 OR2D2Q9H210 308 aa10.82□□□□□ -0.68
APOC1-208ENST00000592535 METTL1Q9UBP6 276 aaKnown RBP10.82□□□□□ -0.68
APOC1-208ENST00000592535 DAPK2Q9UIK4 370 aa10.82□□□□□ -0.68
APOC1-208ENST00000592535 DNAH3Q8TD57 4116 aa10.82□□□□□ -0.68
APOC1-208ENST00000592535 WI2-2373I1.2A0A1W2PRP0 233 aa10.81□□□□□ -0.68
APOC1-208ENST00000592535 IGKV1-16P04430 117 aa10.81□□□□□ -0.68
APOC1-208ENST00000592535 TALDO1P37837 337 aa10.81□□□□□ -0.68
APOC1-208ENST00000592535 RPS16P62249 146 aaKnown RBP10.81□□□□□ -0.68
APOC1-208ENST00000592535 PSG5Q15238 335 aa10.81□□□□□ -0.68
APOC1-208ENST00000592535 TMEM65Q6PI78 240 aa10.81□□□□□ -0.68
APOC1-208ENST00000592535 PDPNQ86YL7 162 aa10.81□□□□□ -0.68
APOC1-208ENST00000592535 ZNF491Q8N8L2 437 aa10.81□□□□□ -0.68
APOC1-208ENST00000592535 MINDY2Q8NBR6 621 aa10.81□□□□□ -0.68
APOC1-208ENST00000592535 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.81□□□□□ -0.68
APOC1-208ENST00000592535 C5orf30Q96GV9 206 aa10.81□□□□□ -0.68
APOC1-208ENST00000592535 CLCC1Q96S66 551 aa10.81□□□□□ -0.68
APOC1-208ENST00000592535 MRPS26Q9BYN8 205 aaKnown RBP10.81□□□□□ -0.68
APOC1-208ENST00000592535 RNF167Q9H6Y7 350 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms