RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 CD46P15529 392 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 HIST1H1BP16401 226 aaKnown RBP9.73□□□□□ -0.85
ZNF540-210ENST00000592533 ELLP55199 621 aaPredicted RBP9.73□□□□□ -0.85
ZNF540-210ENST00000592533 RPL30P62888 115 aaKnown RBP9.73□□□□□ -0.85
ZNF540-210ENST00000592533 AARDQ4LEZ3 155 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 WDR31Q8NA23 367 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 CIB3Q96Q77 187 aaPredicted RBP9.73□□□□□ -0.85
ZNF540-210ENST00000592533 SSX3Q99909 188 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 BCL2L14Q9BZR8 327 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 OR2D2Q9H210 308 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 SRD5A3Q9H8P0 318 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 LAMP3Q9UQV4 416 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 AHCTF1Q8WYP5 2266 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 TRGV5A0A0B4J1U4 118 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 PSG7Q13046 419 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 TMEM241Q24JQ0 296 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 TMEM249Q2WGJ8 235 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 NCR3LG1Q68D85 454 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 INO80CQ6PI98 192 aaPredicted RBP9.73□□□□□ -0.85
ZNF540-210ENST00000592533 C11orf53Q8IXP5 236 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 SLC25A40Q8TBP6 338 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 DIRC2Q96SL1 478 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 SMIM7Q9BQ49 75 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 PRDM13Q9H4Q3 707 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 PITPNC1Q9UKF7 332 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 IGHV1-2P23083 117 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 PSMB3P49720 205 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 TGFBR3Q03167 851 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 GUSBP1Q15486 140 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 ALKBH6Q3KRA9 238 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 GFI1BQ5VTD9 330 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 OR10A7Q8NGE5 316 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 FAM216AQ8WUB2 273 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 GPR61Q9BZJ8 451 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 G6PCP35575 357 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 OR3A1P47881 315 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 ERVS71-1P61550 626 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 GNB2P62879 340 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 COA6Q5JTJ3 125 aaKnown RBP9.72□□□□□ -0.85
ZNF540-210ENST00000592533 OR8G2PQ6IF36 304 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 ZNF66Q6ZN08 573 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 BEND4Q6ZU67 534 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 OR10D4PQ8NGN7 298 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 UBALD1Q8TB05 177 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 S1PR2O95136 353 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 LY86O95711 162 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 HBZP02008 142 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 TUBG1P23258 451 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 RPL23P62829 140 aaKnown RBP9.72□□□□□ -0.85
ZNF540-210ENST00000592533 RNFT1Q5M7Z0 435 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 COQ2Q96H96 371 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 LURAP1Q96LR2 239 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 TAAR6Q96RI8 345 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 TUBG2Q9NRH3 451 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 CLCF1Q9UBD9 225 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 IL17BQ9UHF5 180 aa9.72□□□□□ -0.85
ZNF540-210ENST00000592533 DIDO1Q9BTC0 2240 aaKnown RBP9.72□□□□□ -0.85
ZNF540-210ENST00000592533 A0A1B0GWJ7 208 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 IFNL4K9M1U5 179 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 MLNRO43193 412 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 SOX15O60248 233 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 TNFSF15O95150 251 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 UBE2NP61088 152 aaKnown RBP9.71□□□□□ -0.85
ZNF540-210ENST00000592533 BSXQ3C1V8 233 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 ACP7Q6ZNF0 438 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 ZNF383Q8NA42 475 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 OR51G1Q8NGK1 321 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 DTD1Q8TEA8 209 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 NPCDR1Q9BY65 106 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 ACTR3CQ9C0K3 210 aaPredicted RBP9.71□□□□□ -0.85
ZNF540-210ENST00000592533 FAM90A9PA6NNJ1 464 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 C17orf98A8MV24 154 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 VENTXO95231 258 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 CD59P13987 128 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 COX5AP20674 150 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 IL2RGP31785 369 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 IDH3GP51553 393 aaPredicted RBP9.71□□□□□ -0.85
ZNF540-210ENST00000592533 C16orf82Q7Z2V1 217 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 OR10P1Q8NGE3 313 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 OR10G9Q8NGN4 311 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 OR10G7Q8NGN6 311 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 KLF14Q8TD94 323 aaPredicted RBP9.71□□□□□ -0.85
ZNF540-210ENST00000592533 RNASEH2CQ8TDP1 164 aaKnown RBP9.71□□□□□ -0.85
ZNF540-210ENST00000592533 DEFB127Q9H1M4 99 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 R4GN57 208 aa9.71□□□□□ -0.85
ZNF540-210ENST00000592533 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.71□□□□□ -0.86
ZNF540-210ENST00000592533 LNP1A1A4G5 178 aa9.71□□□□□ -0.86
ZNF540-210ENST00000592533 KRASP01116 189 aa9.71□□□□□ -0.86
ZNF540-210ENST00000592533 IGKV3-15P01624 115 aa9.71□□□□□ -0.86
ZNF540-210ENST00000592533 FGF7P21781 194 aa9.71□□□□□ -0.86
ZNF540-210ENST00000592533 MPV17P39210 176 aa9.71□□□□□ -0.86
ZNF540-210ENST00000592533 CEBPDP49716 269 aaPredicted RBP9.71□□□□□ -0.86
ZNF540-210ENST00000592533 SOX8P57073 446 aa9.71□□□□□ -0.86
ZNF540-210ENST00000592533 CDPF1Q6NVV7 123 aa9.71□□□□□ -0.86
ZNF540-210ENST00000592533 TMEM183AQ8IXX5 376 aa9.71□□□□□ -0.86
ZNF540-210ENST00000592533 LINC00469Q8N7U9 141 aa9.71□□□□□ -0.86
ZNF540-210ENST00000592533 OR52L2PQ8NGH6 319 aa9.71□□□□□ -0.86
ZNF540-210ENST00000592533 OR4X1Q8NH49 305 aa9.71□□□□□ -0.86
ZNF540-210ENST00000592533 OR5R1Q8NH85 324 aa9.71□□□□□ -0.86
ZNF540-210ENST00000592533 ANAPC16Q96DE5 110 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms