RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 BEST4Q8NFU0 473 aa9.45□□□□□ -0.9
LIG3-213ENST00000590630 OR5AN1Q8NGI8 311 aa9.45□□□□□ -0.9
LIG3-213ENST00000590630 OR8U1Q8NH10 309 aa9.45□□□□□ -0.9
LIG3-213ENST00000590630 WIPF2Q8TF74 440 aaPredicted RBP9.45□□□□□ -0.9
LIG3-213ENST00000590630 OR2D2Q9H210 308 aa9.45□□□□□ -0.9
LIG3-213ENST00000590630 PLSCR3Q9NRY6 295 aa9.45□□□□□ -0.9
LIG3-213ENST00000590630 LIN7CQ9NUP9 197 aaKnown RBP9.45□□□□□ -0.9
LIG3-213ENST00000590630 RNF150Q9ULK6 438 aa9.45□□□□□ -0.9
LIG3-213ENST00000590630 GAB2Q9UQC2 676 aa9.45□□□□□ -0.9
LIG3-213ENST00000590630 SH2D7A6NKC9 451 aaPredicted RBP9.44□□□□□ -0.9
LIG3-213ENST00000590630 H0YJW9 148 aa9.44□□□□□ -0.9
LIG3-213ENST00000590630 M0QZ24 198 aa9.44□□□□□ -0.9
LIG3-213ENST00000590630 NOL3O60936 208 aaKnown RBP9.44□□□□□ -0.9
LIG3-213ENST00000590630 PROP1O75360 226 aa9.44□□□□□ -0.9
LIG3-213ENST00000590630 ARPC4P59998 168 aa9.44□□□□□ -0.9
LIG3-213ENST00000590630 ACTBP60709 375 aa9.44□□□□□ -0.9
LIG3-213ENST00000590630 MMDQ15546 238 aa9.44□□□□□ -0.9
LIG3-213ENST00000590630 C9orf152Q5JTZ5 239 aa9.44□□□□□ -0.9
LIG3-213ENST00000590630 PRR31Q5SQ13 230 aa9.44□□□□□ -0.9
LIG3-213ENST00000590630 FAM131AQ6UXB0 335 aa9.44□□□□□ -0.9
LIG3-213ENST00000590630 GVQW1Q8N7I0 195 aa9.44□□□□□ -0.9
LIG3-213ENST00000590630 Q8N9W7 124 aa9.44□□□□□ -0.9
LIG3-213ENST00000590630 WASHC3Q9Y3C0 194 aa9.44□□□□□ -0.9
LIG3-213ENST00000590630 OR2W1Q9Y3N9 320 aa9.44□□□□□ -0.9
LIG3-213ENST00000590630 RBM7Q9Y580 266 aaKnown RBP9.44□□□□□ -0.9
LIG3-213ENST00000590630 H7C2Y5 167 aa9.43□□□□□ -0.9
LIG3-213ENST00000590630 M0R1X1 148 aa9.43□□□□□ -0.9
LIG3-213ENST00000590630 HPGDSO60760 199 aa9.43□□□□□ -0.9
LIG3-213ENST00000590630 FBXO24O75426 580 aa9.43□□□□□ -0.9
LIG3-213ENST00000590630 RBBP9O75884 186 aa9.43□□□□□ -0.9
LIG3-213ENST00000590630 IGHG2P01859 326 aa9.43□□□□□ -0.9
LIG3-213ENST00000590630 PTHLHP12272 177 aa9.43□□□□□ -0.9
LIG3-213ENST00000590630 ELK1P19419 428 aa9.43□□□□□ -0.9
LIG3-213ENST00000590630 PRSS3P35030 304 aa9.43□□□□□ -0.9
LIG3-213ENST00000590630 F2RL1P55085 397 aa9.43□□□□□ -0.9
LIG3-213ENST00000590630 SPCS2Q15005 226 aa9.43□□□□□ -0.9
LIG3-213ENST00000590630 CENPVQ7Z7K6 275 aaPredicted RBP9.43□□□□□ -0.9
LIG3-213ENST00000590630 DRAXINQ8NBI3 349 aaPredicted RBP9.43□□□□□ -0.9
LIG3-213ENST00000590630 RNF5Q99942 180 aa9.43□□□□□ -0.9
LIG3-213ENST00000590630 RASL11BQ9BPW5 248 aa9.43□□□□□ -0.9
LIG3-213ENST00000590630 IFT46Q9NQC8 304 aa9.43□□□□□ -0.9
LIG3-213ENST00000590630 NECAP2Q9NVZ3 263 aa9.43□□□□□ -0.9
LIG3-213ENST00000590630 SDHAF2Q9NX18 166 aa9.43□□□□□ -0.9
LIG3-213ENST00000590630 PLXNB1O43157 2135 aa9.43□□□□□ -0.9
LIG3-213ENST00000590630 NBR2O15453 112 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 KCNAB3O43448 404 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 TUSC2O75896 110 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 SLC22A5O76082 557 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 HLA-DQB1P01920 261 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 APOA2P02652 100 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 NFYAP23511 347 aaPredicted RBP9.42□□□□□ -0.9
LIG3-213ENST00000590630 LUMP51884 338 aaPredicted RBP9.42□□□□□ -0.9
LIG3-213ENST00000590630 TAGLNQ01995 201 aaKnown RBP9.42□□□□□ -0.9
LIG3-213ENST00000590630 C2orf68Q2NKX9 166 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 GLDNQ6ZMI3 551 aaPredicted RBP9.42□□□□□ -0.9
LIG3-213ENST00000590630 SLC35E3Q7Z769 313 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 PDPNQ86YL7 162 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 FOXRED2Q8IWF2 684 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 ZNF383Q8NA42 475 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 NPBQ8NG41 125 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 OR5AP2Q8NGF4 316 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 CHPT1Q8WUD6 406 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 SNAPC3Q92966 411 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 ISOC1Q96CN7 298 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 SCPEP1Q9HB40 452 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 CCDC59Q9P031 241 aaKnown RBP9.42□□□□□ -0.9
LIG3-213ENST00000590630 KIAA1456Q9P272 454 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 ADAM30Q9UKF2 790 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 ANAPC10Q9UM13 185 aa9.42□□□□□ -0.9
LIG3-213ENST00000590630 MRPS7Q9Y2R9 242 aaKnown RBP9.42□□□□□ -0.9
LIG3-213ENST00000590630 FAM25AB3EWG3 89 aa9.41□□□□□ -0.9
LIG3-213ENST00000590630 FAM25CB3EWG5 89 aa9.41□□□□□ -0.9
LIG3-213ENST00000590630 FAM25GB3EWG6 89 aa9.41□□□□□ -0.9
LIG3-213ENST00000590630 H3BMQ9 156 aa9.41□□□□□ -0.9
LIG3-213ENST00000590630 AP4M1O00189 453 aa9.41□□□□□ -0.9
LIG3-213ENST00000590630 TPPPO94811 219 aa9.41□□□□□ -0.9
LIG3-213ENST00000590630 NDUFA3O95167 84 aa9.41□□□□□ -0.9
LIG3-213ENST00000590630 OR5H8P0DN80 308 aa9.41□□□□□ -0.9
LIG3-213ENST00000590630 C5orf64Q2M2E5 130 aa9.41□□□□□ -0.9
LIG3-213ENST00000590630 ZNF645Q8N7E2 425 aa9.41□□□□□ -0.9
LIG3-213ENST00000590630 C11orf44Q8N8P7 122 aa9.41□□□□□ -0.9
LIG3-213ENST00000590630 OR5AU1Q8NGC0 362 aa9.41□□□□□ -0.9
LIG3-213ENST00000590630 OR4X2Q8NGF9 303 aa9.41□□□□□ -0.9
LIG3-213ENST00000590630 DYNC2LI1Q8TCX1 351 aa9.41□□□□□ -0.9
LIG3-213ENST00000590630 RBMXL1Q96E39 390 aaKnown RBP9.41□□□□□ -0.9
LIG3-213ENST00000590630 ADTRPQ96IZ2 230 aa9.41□□□□□ -0.9
LIG3-213ENST00000590630 RITA1Q96K30 269 aa9.41□□□□□ -0.9
LIG3-213ENST00000590630 GON7Q9BXV9 100 aa9.41□□□□□ -0.9
LIG3-213ENST00000590630 PSMB11A5LHX3 300 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 MEIS3P1A6NDR6 274 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 SULT1C2O00338 296 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 RGS5O15539 181 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 HLA-DRB1P01911 266 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 IGKV1-16P04430 117 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 RRASP10301 218 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 CD28P10747 220 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 NAT1P18440 290 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 CNTFRP26992 372 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 FCGR2CP31995 323 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 THBS3P49746 956 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms