RNA–Protein interactions for RNA: ENST00000590181.5

LIG3-212, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,156 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-212ENST00000590181 PSMB9P28065 219 aa8.26□□□□□ -1.09
LIG3-212ENST00000590181 CD40LGP29965 261 aa8.26□□□□□ -1.09
LIG3-212ENST00000590181 CRIP2P52943 208 aaPredicted RBP8.26□□□□□ -1.09
LIG3-212ENST00000590181 F2RL1P55085 397 aa8.26□□□□□ -1.09
LIG3-212ENST00000590181 C5orf64Q2M2E5 130 aa8.26□□□□□ -1.09
LIG3-212ENST00000590181 KHDC1LQ5JSQ8 128 aa8.26□□□□□ -1.09
LIG3-212ENST00000590181 HES5Q5TA89 166 aa8.26□□□□□ -1.09
LIG3-212ENST00000590181 C22orf42Q6IC83 251 aa8.26□□□□□ -1.09
LIG3-212ENST00000590181 PDPNQ86YL7 162 aa8.26□□□□□ -1.09
LIG3-212ENST00000590181 UBALD1Q8TB05 177 aa8.26□□□□□ -1.09
LIG3-212ENST00000590181 TMEM68Q96MH6 324 aa8.26□□□□□ -1.09
LIG3-212ENST00000590181 CABLES2Q9BTV7 478 aa8.26□□□□□ -1.09
LIG3-212ENST00000590181 C11orf54Q9H0W9 315 aaPredicted RBP8.26□□□□□ -1.09
LIG3-212ENST00000590181 OR51J1Q9H342 316 aa8.26□□□□□ -1.09
LIG3-212ENST00000590181 TRBV6-7A0A0A0MS04 114 aa8.25□□□□□ -1.09
LIG3-212ENST00000590181 MFNGO00587 321 aa8.25□□□□□ -1.09
LIG3-212ENST00000590181 RRHO14718 337 aa8.25□□□□□ -1.09
LIG3-212ENST00000590181 TFAP2AP05549 437 aa8.25□□□□□ -1.09
LIG3-212ENST00000590181 FCGR3AP08637 254 aa8.25□□□□□ -1.09
LIG3-212ENST00000590181 THBS3P49746 956 aa8.25□□□□□ -1.09
LIG3-212ENST00000590181 RUNX1Q01196 453 aa8.25□□□□□ -1.09
LIG3-212ENST00000590181 ARFRP1Q13795 201 aa8.25□□□□□ -1.09
LIG3-212ENST00000590181 GNMTQ14749 295 aa8.25□□□□□ -1.09
LIG3-212ENST00000590181 AKIRIN2Q53H80 203 aa8.25□□□□□ -1.09
LIG3-212ENST00000590181 PLAC9Q5JTB6 97 aa8.25□□□□□ -1.09
LIG3-212ENST00000590181 HACD4Q5VWC8 232 aa8.25□□□□□ -1.09
LIG3-212ENST00000590181 FOXB2Q5VYV0 432 aa8.25□□□□□ -1.09
LIG3-212ENST00000590181 ZNF562Q6V9R5 426 aa8.25□□□□□ -1.09
LIG3-212ENST00000590181 ZNF329Q86UD4 541 aa8.25□□□□□ -1.09
LIG3-212ENST00000590181 UBE2E2Q96LR5 201 aa8.25□□□□□ -1.09
LIG3-212ENST00000590181 MRPL20Q9BYC9 149 aaKnown RBP8.25□□□□□ -1.09
LIG3-212ENST00000590181 RYR2Q92736 4967 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 A0A1W2PRX2 142 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 NUDT19A8MXV4 375 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 ZNF736B4DX44 427 aaPredicted RBP8.24□□□□□ -1.09
LIG3-212ENST00000590181 H0YJW9 148 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 H7C2Y5 167 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 K7EIL1 84 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 TNFAIP8O95379 198 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 IGLV1-40P01703 118 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 SCTP09683 121 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 CT45A6P0DMU7 189 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 CT45A5P0DMU8 189 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 CT45A7P0DMV0 189 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 PSMB8P28062 276 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 OR3A3P47888 321 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 INSL3P51460 131 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 CLDN12P56749 244 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 CFHR3Q02985 330 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 LINC00482Q8N8I6 264 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 MINDY2Q8NBR6 621 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 OR5M8Q8NGP6 311 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 C4orf3Q8WVX3 66 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 FLYWCH2Q96CP2 140 aaKnown RBP8.24□□□□□ -1.09
LIG3-212ENST00000590181 NOL4LQ96MY1 436 aaPredicted RBP8.24□□□□□ -1.09
LIG3-212ENST00000590181 ATG5Q9H1Y0 275 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 RDH8Q9NYR8 311 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 KCNK7Q9Y2U2 307 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 STAB2Q8WWQ8 2551 aa8.24□□□□□ -1.09
LIG3-212ENST00000590181 A0A087WXM4 84 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 TRAV41A0A0B4J266 112 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 H3BUA1 57 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 CCL24O00175 119 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 CREBL2O60519 120 aaPredicted RBP8.23□□□□□ -1.09
LIG3-212ENST00000590181 RAMP3O60896 148 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 BRI3O95415 125 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 PPIFP30405 207 aaKnown RBP8.23□□□□□ -1.09
LIG3-212ENST00000590181 EGFEM1PQ0D2K5 195 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 PLGLAQ15195 96 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 MSMO1Q15800 293 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 RTL8BQ17RB0 113 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 CDNFQ49AH0 187 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 SFXN4Q6P4A7 337 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 CNIH2Q6PI25 160 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 FAM131AQ6UXB0 335 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 MRPL41Q8IXM3 137 aaKnown RBP8.23□□□□□ -1.09
LIG3-212ENST00000590181 KLHL30-AS1Q8NEE0 82 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 MYOZ3Q8TDC0 251 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 BORCS5Q969J3 196 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 P2RX4Q99571 388 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 AIFM2Q9BRQ8 373 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 GINS4Q9BRT9 223 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 SLA2Q9H6Q3 261 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 DIABLOQ9NR28 239 aa8.23□□□□□ -1.09
LIG3-212ENST00000590181 DNAH7Q8WXX0 4024 aa8.22□□□□□ -1.09
LIG3-212ENST00000590181 IGHV7-81A0A0B4J1V7 117 aa8.22□□□□□ -1.09
LIG3-212ENST00000590181 SH2D7A6NKC9 451 aaPredicted RBP8.22□□□□□ -1.09
LIG3-212ENST00000590181 IGLL1P15814 213 aa8.22□□□□□ -1.09
LIG3-212ENST00000590181 GNB3P16520 340 aa8.22□□□□□ -1.09
LIG3-212ENST00000590181 CD36P16671 472 aa8.22□□□□□ -1.09
LIG3-212ENST00000590181 CBX5P45973 191 aa8.22□□□□□ -1.09
LIG3-212ENST00000590181 LUMP51884 338 aaPredicted RBP8.22□□□□□ -1.09
LIG3-212ENST00000590181 OR10A3P58181 314 aa8.22□□□□□ -1.09
LIG3-212ENST00000590181 MOGAT2Q3SYC2 334 aa8.22□□□□□ -1.09
LIG3-212ENST00000590181 FAM53AQ6NSI3 398 aaPredicted RBP8.22□□□□□ -1.09
LIG3-212ENST00000590181 OSR1Q8TAX0 266 aaPredicted RBP8.22□□□□□ -1.09
LIG3-212ENST00000590181 ABHD14BQ96IU4 210 aa8.22□□□□□ -1.09
LIG3-212ENST00000590181 WWC2-AS2Q96NR7 200 aa8.22□□□□□ -1.09
LIG3-212ENST00000590181 HDHD3Q9BSH5 251 aaPredicted RBP8.22□□□□□ -1.09
LIG3-212ENST00000590181 KCNK15Q9H427 330 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms