RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 BLCAPP62952 87 aa8.29□□□□□ -1.08
SDF2-208ENST00000589788 ZNF816Q0VGE8 651 aaPredicted RBP8.29□□□□□ -1.08
SDF2-208ENST00000589788 HABP2Q14520 560 aaPredicted RBP8.29□□□□□ -1.08
SDF2-208ENST00000589788 GNMTQ14749 295 aa8.29□□□□□ -1.08
SDF2-208ENST00000589788 MOGAT2Q3SYC2 334 aa8.29□□□□□ -1.08
SDF2-208ENST00000589788 MORN2Q502X0 79 aa8.29□□□□□ -1.08
SDF2-208ENST00000589788 CT45A1Q5HYN5 189 aa8.29□□□□□ -1.08
SDF2-208ENST00000589788 TMEM69Q5SWH9 247 aa8.29□□□□□ -1.08
SDF2-208ENST00000589788 SLC25A48Q6ZT89 311 aaKnown RBP8.29□□□□□ -1.08
SDF2-208ENST00000589788 LYG1Q8N1E2 194 aa8.29□□□□□ -1.08
SDF2-208ENST00000589788 KLHDC1Q8N7A1 406 aa8.29□□□□□ -1.08
SDF2-208ENST00000589788 ZNF439Q8NDP4 499 aa8.29□□□□□ -1.08
SDF2-208ENST00000589788 OR10R2Q8NGX6 335 aa8.29□□□□□ -1.08
SDF2-208ENST00000589788 CT45A3Q8NHU0 189 aa8.29□□□□□ -1.08
SDF2-208ENST00000589788 C15orf40Q8WUR7 153 aa8.29□□□□□ -1.08
SDF2-208ENST00000589788 RBM14Q96PK6 669 aaKnown RBP8.29□□□□□ -1.08
SDF2-208ENST00000589788 SOSTQ9BQB4 213 aa8.29□□□□□ -1.08
SDF2-208ENST00000589788 HDHD3Q9BSH5 251 aaPredicted RBP8.29□□□□□ -1.08
SDF2-208ENST00000589788 WDR12Q9GZL7 423 aaKnown RBP8.29□□□□□ -1.08
SDF2-208ENST00000589788 TRBV6-6A0A0A6YYG2 114 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 FAM90A9PA6NNJ1 464 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 M0QZ24 198 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 M0QZK8 103 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 HSPA12AO43301 675 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 TXNL1O43396 289 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 YPEL1O60688 119 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 TMEM11P17152 192 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 VDAC2P45880 294 aaPredicted RBP8.28□□□□□ -1.08
SDF2-208ENST00000589788 ZNF134P52741 427 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 TAS2R20P59543 309 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 KRTAP10-3P60369 221 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 HLA-DRB3P79483 266 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 IL18Q14116 193 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 HNF4GQ14541 408 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 ZNF846Q147U1 533 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 ARL6IP1Q15041 203 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 ZNF79Q15937 498 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 ABCA11PQ4W5N1 156 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 PLAC9Q5JTB6 97 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 PYHIN1Q6K0P9 492 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 ZNF880Q6PDB4 577 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 TEPPQ6URK8 271 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 FAM131AQ6UXB0 335 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 C5orf24Q7Z6I8 188 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 TGIF2LXQ8IUE1 241 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 Q8N2B8 174 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 OR2AK2Q8NG84 335 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 RTN4IP1Q8WWV3 396 aaPredicted RBP8.28□□□□□ -1.08
SDF2-208ENST00000589788 CFHR4Q92496 578 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 ST6GALNAC6Q969X2 333 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 YPEL2Q96QA6 119 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 ABHD14AQ9BUJ0 271 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 MOB4Q9Y3A3 225 aa8.28□□□□□ -1.08
SDF2-208ENST00000589788 TRAV18A0A075B6X5 111 aa8.27□□□□□ -1.09
SDF2-208ENST00000589788 IGHV3-72A0A0B4J1Y9 119 aa8.27□□□□□ -1.09
SDF2-208ENST00000589788 MFNGO00587 321 aa8.27□□□□□ -1.09
SDF2-208ENST00000589788 IGKV1D-33P01593 117 aa8.27□□□□□ -1.09
SDF2-208ENST00000589788 IGKV1-33P01594 117 aa8.27□□□□□ -1.09
SDF2-208ENST00000589788 HIST1H1DP16402 221 aaKnown RBP8.27□□□□□ -1.09
SDF2-208ENST00000589788 GNB3P16520 340 aa8.27□□□□□ -1.09
SDF2-208ENST00000589788 CD40LGP29965 261 aa8.27□□□□□ -1.09
SDF2-208ENST00000589788 ZNF137PP52743 207 aa8.27□□□□□ -1.09
SDF2-208ENST00000589788 PITPNAQ00169 270 aa8.27□□□□□ -1.09
SDF2-208ENST00000589788 ARFRP1Q13795 201 aa8.27□□□□□ -1.09
SDF2-208ENST00000589788 HERPUD1Q15011 391 aa8.27□□□□□ -1.09
SDF2-208ENST00000589788 C9orf152Q5JTZ5 239 aa8.27□□□□□ -1.09
SDF2-208ENST00000589788 PRR31Q5SQ13 230 aa8.27□□□□□ -1.09
SDF2-208ENST00000589788 LY6G6FQ5SQ64 297 aa8.27□□□□□ -1.09
SDF2-208ENST00000589788 ETV3LQ6ZN32 361 aa8.27□□□□□ -1.09
SDF2-208ENST00000589788 IZUMO1Q8IYV9 350 aa8.27□□□□□ -1.09
SDF2-208ENST00000589788 Q9N2K0 584 aa8.27□□□□□ -1.09
SDF2-208ENST00000589788 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.27□□□□□ -1.09
SDF2-208ENST00000589788 SERTAD4Q9NUC0 356 aa8.27□□□□□ -1.09
SDF2-208ENST00000589788 SLC23A1Q9UHI7 598 aa8.27□□□□□ -1.09
SDF2-208ENST00000589788 TET2Q6N021 2002 aaPredicted RBP8.26□□□□□ -1.09
SDF2-208ENST00000589788 SERPINE3A8MV23 424 aa8.26□□□□□ -1.09
SDF2-208ENST00000589788 TRDCB7Z8K6 153 aa8.26□□□□□ -1.09
SDF2-208ENST00000589788 CTDSPLO15194 276 aa8.26□□□□□ -1.09
SDF2-208ENST00000589788 LANCL1O43813 399 aa8.26□□□□□ -1.09
SDF2-208ENST00000589788 HLA-DQB1P01920 261 aa8.26□□□□□ -1.09
SDF2-208ENST00000589788 ZBTB25P24278 435 aa8.26□□□□□ -1.09
SDF2-208ENST00000589788 PPP5CP53041 499 aa8.26□□□□□ -1.09
SDF2-208ENST00000589788 MRPS10P82664 201 aaKnown RBP8.26□□□□□ -1.09
SDF2-208ENST00000589788 ZNF260Q3ZCT1 412 aa8.26□□□□□ -1.09
SDF2-208ENST00000589788 FBLN7Q53RD9 439 aa8.26□□□□□ -1.09
SDF2-208ENST00000589788 Q6ZPA2 131 aa8.26□□□□□ -1.09
SDF2-208ENST00000589788 C11orf44Q8N8P7 122 aa8.26□□□□□ -1.09
SDF2-208ENST00000589788 GDPD1Q8N9F7 314 aa8.26□□□□□ -1.09
SDF2-208ENST00000589788 OR2T10Q8NGZ9 312 aa8.26□□□□□ -1.09
SDF2-208ENST00000589788 ABHD1Q96SE0 405 aa8.26□□□□□ -1.09
SDF2-208ENST00000589788 SRRQ9GZT4 340 aa8.26□□□□□ -1.09
SDF2-208ENST00000589788 AUNIPQ9H7T9 357 aa8.26□□□□□ -1.09
SDF2-208ENST00000589788 MRPS7Q9Y2R9 242 aaKnown RBP8.26□□□□□ -1.09
SDF2-208ENST00000589788 KCNK7Q9Y2U2 307 aa8.26□□□□□ -1.09
SDF2-208ENST00000589788 FBN3Q75N90 2809 aa8.26□□□□□ -1.09
SDF2-208ENST00000589788 TMEM235A6NFC5 223 aa8.25□□□□□ -1.09
SDF2-208ENST00000589788 NCBP2LA6PVI3 153 aaKnown RBP8.25□□□□□ -1.09
SDF2-208ENST00000589788 MOSP00540 346 aa8.25□□□□□ -1.09
SDF2-208ENST00000589788 AMY1AP04745 511 aa8.25□□□□□ -1.09
SDF2-208ENST00000589788 FCGR3AP08637 254 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms