RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 GZMHP20718 246 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 DTYMKP23919 212 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 ERP29P30040 261 aaKnown RBP4.72□□□□□ -1.65
VPS25-204ENST00000589577 TNFSF8P32971 234 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 OR3A3P47888 321 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 P2RX3P56373 397 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 TAS2R46P59540 309 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 ARPC4P59998 168 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 QRFPP83859 136 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 MEF2CQ06413 473 aaPredicted RBP4.72□□□□□ -1.65
VPS25-204ENST00000589577 ZNF846Q147U1 533 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 TMEM30BQ3MIR4 351 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 ACTBL2Q562R1 376 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 C9orf152Q5JTZ5 239 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 HACD4Q5VWC8 232 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 ZNF554Q86TJ5 538 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 TMEM17Q86X19 198 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 FAM89BQ8N5H3 189 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 FAM71E2Q8N5Q1 922 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 CD177Q8N6Q3 437 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 GDPD1Q8N9F7 314 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 OR4M1Q8NGD0 313 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 OR6Q1Q8NGQ2 317 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 SLC25A38Q96DW6 304 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 AKR1E2Q96JD6 320 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 PECRQ9BY49 303 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 NXF2Q9GZY0 626 aaKnown RBP4.72□□□□□ -1.65
VPS25-204ENST00000589577 AUNIPQ9H7T9 357 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 RCC2Q9P258 522 aaKnown RBP4.72□□□□□ -1.65
VPS25-204ENST00000589577 IL36RNQ9UBH0 155 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 TRAV24A0A0B4J272 114 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 ODAMA1E959 279 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 MEX3AA1L020 520 aaKnown RBP4.71□□□□□ -1.66
VPS25-204ENST00000589577 ZNF729A6NN14 1252 aaPredicted RBP4.71□□□□□ -1.66
VPS25-204ENST00000589577 CENPXA8MT69 81 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 GABARAPH6UMI1 98 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 MFNGO00587 321 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 IFNA6P05013 189 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 CTXN2P0C2S0 81 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 S100GP29377 79 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 ETV6P41212 452 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 OR3A1P47881 315 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 CDX1P47902 265 aaPredicted RBP4.71□□□□□ -1.66
VPS25-204ENST00000589577 DEFA1P59665 94 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 DEFA3P59666 94 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 SSBP1Q04837 148 aaKnown RBP4.71□□□□□ -1.66
VPS25-204ENST00000589577 AESQ08117 197 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 DMRTA1Q5VZB9 504 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 OR52W1Q6IF63 320 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 Q6P435 159 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 ZNF429Q86V71 674 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 IZUMO1Q8IYV9 350 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 Q8N402 240 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 CHPT1Q8WUD6 406 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 NUDCD2Q8WVJ2 157 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 ST6GALNAC6Q969X2 333 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 GALMQ96C23 342 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 ZNF714Q96N38 554 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 SULT4A1Q9BR01 284 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 GINS4Q9BRT9 223 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 FAAP24Q9BTP7 215 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 CCDC32Q9BV29 185 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 ST6GALNAC5Q9BVH7 336 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 NCOR1P1Q9H4R4 102 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 TAS2R3Q9NYW6 316 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 GNG12Q9UBI6 72 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 AK3Q9UIJ7 227 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 KIF25Q9UIL4 384 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 UBE2J1Q9Y385 318 aaPredicted RBP4.71□□□□□ -1.66
VPS25-204ENST00000589577 RBM7Q9Y580 266 aaKnown RBP4.71□□□□□ -1.66
VPS25-204ENST00000589577 LINC00312Q9Y6C7 94 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 DNAH17Q9UFH2 4485 aa4.71□□□□□ -1.66
VPS25-204ENST00000589577 A0A0A6YYD4 124 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 TRBV6-6A0A0A6YYG2 114 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 TMEM82A0PJX8 343 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 LINC01548A6NM66 108 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 ZNF736B4DX44 427 aaPredicted RBP4.7□□□□□ -1.66
VPS25-204ENST00000589577 CTDSPLO15194 276 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 PSPNO60542 156 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 ZNF737O75373 536 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 BRI3O95415 125 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 DIRAS3O95661 229 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 FCGR3AP08637 254 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 ZNF728P0DKX0 622 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 TBPP20226 339 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 CD40LGP29965 261 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 ARHGDIBP52566 201 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 TAS2R19P59542 299 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 TSPAN5P62079 268 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 HLA-DRB3P79483 266 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 PRR20EP86478 221 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 PRR20CP86479 221 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 PRR20DP86480 221 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 PRR20BP86481 221 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 PRR20AP86496 221 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 PAX5Q02548 391 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 MADCAM1Q13477 382 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 MOGAT2Q3SYC2 334 aa4.7□□□□□ -1.66
VPS25-204ENST00000589577 RNASE12Q5GAN4 147 aaKnown RBP4.7□□□□□ -1.66
VPS25-204ENST00000589577 RNASE10Q5GAN6 216 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms