RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 CRTAPO75718 401 aaPredicted RBP16.38■□□□□ 0.21
CAPNS1-205ENST00000588780 SC5DO75845 299 aa16.38■□□□□ 0.21
CAPNS1-205ENST00000588780 NDUFB8O95169 186 aa16.38■□□□□ 0.21
CAPNS1-205ENST00000588780 SPDEFO95238 335 aa16.38■□□□□ 0.21
CAPNS1-205ENST00000588780 GYS2P54840 703 aa16.38■□□□□ 0.21
CAPNS1-205ENST00000588780 AWAT2Q6E213 333 aa16.38■□□□□ 0.21
CAPNS1-205ENST00000588780 PHB2Q99623 299 aa16.38■□□□□ 0.21
CAPNS1-205ENST00000588780 ERVK13-1Q9NX77 482 aa16.38■□□□□ 0.21
CAPNS1-205ENST00000588780 CKLFQ9UBR5 152 aa16.38■□□□□ 0.21
CAPNS1-205ENST00000588780 H3BNX3 289 aa16.37■□□□□ 0.21
CAPNS1-205ENST00000588780 APELAP0DMC3 54 aa16.37■□□□□ 0.21
CAPNS1-205ENST00000588780 MGMTP16455 207 aa16.37■□□□□ 0.21
CAPNS1-205ENST00000588780 SNRPGP62308 76 aaKnown RBP16.37■□□□□ 0.21
CAPNS1-205ENST00000588780 DEFB114Q30KQ6 69 aa16.37■□□□□ 0.21
CAPNS1-205ENST00000588780 DNAL1Q4LDG9 190 aa16.37■□□□□ 0.21
CAPNS1-205ENST00000588780 LYG2Q86SG7 212 aa16.37■□□□□ 0.21
CAPNS1-205ENST00000588780 OR5AN1Q8NGI8 311 aa16.37■□□□□ 0.21
CAPNS1-205ENST00000588780 WDR89Q96FK6 387 aaPredicted RBP16.37■□□□□ 0.21
CAPNS1-205ENST00000588780 CYYR1Q96J86 154 aa16.37■□□□□ 0.21
CAPNS1-205ENST00000588780 AASSQ9UDR5 926 aa16.37■□□□□ 0.21
CAPNS1-205ENST00000588780 LOC102724200A0A096LPH7 203 aaPredicted RBP16.36■□□□□ 0.21
CAPNS1-205ENST00000588780 GLAP06280 429 aa16.36■□□□□ 0.21
CAPNS1-205ENST00000588780 EWSR1Q01844 656 aaKnown RBP eCLIP16.36■□□□□ 0.21
CAPNS1-205ENST00000588780 SETD6Q8TBK2 473 aa16.36■□□□□ 0.21
CAPNS1-205ENST00000588780 TMEM68Q96MH6 324 aa16.36■□□□□ 0.21
CAPNS1-205ENST00000588780 ORC6Q9Y5N6 252 aa16.36■□□□□ 0.21
CAPNS1-205ENST00000588780 GMPPBQ9Y5P6 360 aa16.36■□□□□ 0.21
CAPNS1-205ENST00000588780 SELENOKQ9Y6D0 94 aa16.36■□□□□ 0.21
CAPNS1-205ENST00000588780 KIAA1109Q2LD37 5005 aa16.36■□□□□ 0.21
CAPNS1-205ENST00000588780 FAM90A7PA6NKC0 464 aa16.35■□□□□ 0.21
CAPNS1-205ENST00000588780 FAM90A23PA8MXZ1 464 aa16.35■□□□□ 0.21
CAPNS1-205ENST00000588780 PDCD6O75340 191 aa16.35■□□□□ 0.21
CAPNS1-205ENST00000588780 IGKV1-16P04430 117 aa16.35■□□□□ 0.21
CAPNS1-205ENST00000588780 SLC25A30Q5SVS4 291 aa16.35■□□□□ 0.21
CAPNS1-205ENST00000588780 LGALS9CQ6DKI2 356 aa16.35■□□□□ 0.21
CAPNS1-205ENST00000588780 THRSPQ92748 146 aa16.35■□□□□ 0.21
CAPNS1-205ENST00000588780 CHMP1AQ9HD42 196 aaPredicted RBP16.35■□□□□ 0.21
CAPNS1-205ENST00000588780 AMBNQ9NP70 447 aa16.35■□□□□ 0.21
CAPNS1-205ENST00000588780 OAZ3Q9UMX2 235 aa16.35■□□□□ 0.21
CAPNS1-205ENST00000588780 KMT2AQ03164 3969 aa16.35■□□□□ 0.21
CAPNS1-205ENST00000588780 SAC3D1A6NKF1 404 aa16.34■□□□□ 0.21
CAPNS1-205ENST00000588780 APOA2P02652 100 aa16.34■□□□□ 0.21
CAPNS1-205ENST00000588780 PJVKQ0ZLH3 352 aa16.34■□□□□ 0.21
CAPNS1-205ENST00000588780 HMGN3Q15651 99 aa16.34■□□□□ 0.21
CAPNS1-205ENST00000588780 RPL22L1Q6P5R6 122 aaKnown RBP16.34■□□□□ 0.21
CAPNS1-205ENST00000588780 CCDC197Q8NCU1 140 aa16.34■□□□□ 0.21
CAPNS1-205ENST00000588780 OR52B4Q8NGK2 314 aa16.34■□□□□ 0.21
CAPNS1-205ENST00000588780 AP4S1Q9Y587 144 aa16.34■□□□□ 0.21
CAPNS1-205ENST00000588780 BMPR1BO00238 502 aa16.33■□□□□ 0.2
CAPNS1-205ENST00000588780 MPPED1O15442 326 aa16.33■□□□□ 0.2
CAPNS1-205ENST00000588780 FOLR2P14207 255 aa16.33■□□□□ 0.2
CAPNS1-205ENST00000588780 TNFRSF9Q07011 255 aa16.33■□□□□ 0.2
CAPNS1-205ENST00000588780 EXOSC2Q13868 293 aaKnown RBP16.33■□□□□ 0.2
CAPNS1-205ENST00000588780 SIGIRRQ6IA17 410 aa16.33■□□□□ 0.2
CAPNS1-205ENST00000588780 FAM46BQ96A09 425 aa16.33■□□□□ 0.2
CAPNS1-205ENST00000588780 NEDD4LQ96PU5 975 aa16.33■□□□□ 0.2
CAPNS1-205ENST00000588780 TECRQ9NZ01 308 aaKnown RBP16.33■□□□□ 0.2
CAPNS1-205ENST00000588780 TUSC2O75896 110 aa16.32■□□□□ 0.2
CAPNS1-205ENST00000588780 FCGR1AP12314 374 aa16.32■□□□□ 0.2
CAPNS1-205ENST00000588780 KIR2DS2P43631 304 aa16.32■□□□□ 0.2
CAPNS1-205ENST00000588780 ATP5G2Q06055 141 aa16.32■□□□□ 0.2
CAPNS1-205ENST00000588780 PDPNQ86YL7 162 aa16.32■□□□□ 0.2
CAPNS1-205ENST00000588780 OR13C5Q8NGS8 318 aa16.32■□□□□ 0.2
CAPNS1-205ENST00000588780 Q96M66 194 aa16.32■□□□□ 0.2
CAPNS1-205ENST00000588780 ZNF221Q9UK13 617 aa16.32■□□□□ 0.2
CAPNS1-205ENST00000588780 DNAH10Q8IVF4 4471 aa16.32■□□□□ 0.2
CAPNS1-205ENST00000588780 C2orf70A6NJV1 201 aa16.31■□□□□ 0.2
CAPNS1-205ENST00000588780 SPRY2O43597 315 aa16.31■□□□□ 0.2
CAPNS1-205ENST00000588780 BMI1P35226 326 aa16.31■□□□□ 0.2
CAPNS1-205ENST00000588780 ZIK1Q3SY52 487 aaPredicted RBP16.31■□□□□ 0.2
CAPNS1-205ENST00000588780 XAF1Q6GPH4 301 aa16.31■□□□□ 0.2
CAPNS1-205ENST00000588780 TMEM217Q8N7C4 229 aa16.31■□□□□ 0.2
CAPNS1-205ENST00000588780 PHLDA1Q8WV24 401 aaPredicted RBP16.31■□□□□ 0.2
CAPNS1-205ENST00000588780 IGFBP3P17936 291 aaPredicted RBP16.3■□□□□ 0.2
CAPNS1-205ENST00000588780 EDN2P20800 178 aa16.3■□□□□ 0.2
CAPNS1-205ENST00000588780 CEACAM6P40199 344 aa16.3■□□□□ 0.2
CAPNS1-205ENST00000588780 LINC00205P59089 165 aa16.3■□□□□ 0.2
CAPNS1-205ENST00000588780 RHOGP84095 191 aa16.3■□□□□ 0.2
CAPNS1-205ENST00000588780 CCDC58Q4VC31 144 aa16.3■□□□□ 0.2
CAPNS1-205ENST00000588780 ZNF383Q8NA42 475 aa16.3■□□□□ 0.2
CAPNS1-205ENST00000588780 EDARADDQ8WWZ3 215 aa16.3■□□□□ 0.2
CAPNS1-205ENST00000588780 OR14A2Q96R54 314 aa16.3■□□□□ 0.2
CAPNS1-205ENST00000588780 SULT4A1Q9BR01 284 aa16.3■□□□□ 0.2
CAPNS1-205ENST00000588780 FAAP24Q9BTP7 215 aa16.3■□□□□ 0.2
CAPNS1-205ENST00000588780 ZC4H2Q9NQZ6 224 aa16.3■□□□□ 0.2
CAPNS1-205ENST00000588780 TRAV8-7A0A075B6U6 113 aa16.29■□□□□ 0.2
CAPNS1-205ENST00000588780 A0A1W2PPK0 400 aa16.29■□□□□ 0.2
CAPNS1-205ENST00000588780 MSGN1A6NI15 193 aa16.29■□□□□ 0.2
CAPNS1-205ENST00000588780 RBMXL2O75526 392 aaKnown RBP16.29■□□□□ 0.2
CAPNS1-205ENST00000588780 CAPGP40121 348 aa16.29■□□□□ 0.2
CAPNS1-205ENST00000588780 SSBP2P81877 361 aaPredicted RBP16.29■□□□□ 0.2
CAPNS1-205ENST00000588780 DEFB135Q30KP9 77 aa16.29■□□□□ 0.2
CAPNS1-205ENST00000588780 OR52I1Q8NGK6 324 aa16.29■□□□□ 0.2
CAPNS1-205ENST00000588780 Q96MT0 163 aa16.29■□□□□ 0.2
CAPNS1-205ENST00000588780 C11orf54Q9H0W9 315 aaPredicted RBP16.29■□□□□ 0.2
CAPNS1-205ENST00000588780 AKIP1Q9NQ31 210 aa16.29■□□□□ 0.2
CAPNS1-205ENST00000588780 SLC35D1Q9NTN3 355 aa16.29■□□□□ 0.2
CAPNS1-205ENST00000588780 SCAF4O95104 1147 aaKnown RBP16.28■□□□□ 0.2
CAPNS1-205ENST00000588780 PRH1P02810 166 aa16.28■□□□□ 0.2
CAPNS1-205ENST00000588780 OR9G9P0C7N8 305 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms