RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 ABLIM2Q6H8Q1 611 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 ZNF343Q6P1L6 599 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 FBXW12Q6X9E4 464 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 CYP2G1PQ6ZSU1 146 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 C22orf34Q6ZV56 151 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 GRINAQ7Z429 371 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 MARCH3Q86UD3 253 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 RTN4RL2Q86UN3 420 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.51□□□□□ -1.85
LIG3-211ENST00000588713 FOXRED2Q8IWF2 684 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 H1FOOQ8IZA3 346 aaPredicted RBP3.51□□□□□ -1.85
LIG3-211ENST00000588713 FAM185AQ8N0U4 392 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 GCNT2Q8N0V5 402 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 GPR137CQ8N3F9 429 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 OR2C3Q8N628 320 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 C9orf106Q8NAJ2 232 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 GATSQ8NAP1 163 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 APCDD1LQ8NCL9 501 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 ADPRHL1Q8NDY3 354 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 NOXO1Q8NFA2 376 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 OR10A7Q8NGE5 316 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 OR4C3Q8NH37 302 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 C10orf105Q8TEF2 133 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 DOK4Q8TEW6 326 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 TMEM170AQ8WVE7 144 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 PP6455Q8WZ26 134 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 FRZBQ92765 325 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 NEUROG1Q92886 237 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 DAZLQ92904 295 aaKnown RBP3.51□□□□□ -1.85
LIG3-211ENST00000588713 TMEM18Q96B42 140 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 C10orf35Q96D05 121 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 ARHGAP5-AS1Q96IT6 56 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 TBX15Q96SF7 602 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 PYGO2Q9BRQ0 406 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 ZNF2Q9BSG1 426 aaPredicted RBP3.51□□□□□ -1.85
LIG3-211ENST00000588713 PRO1933Q9H354 126 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 WFDC1Q9HC57 220 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 CRLF2Q9HC73 371 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 Q9N2K0 584 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 ESM1Q9NQ30 184 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 LYRM2Q9NU23 88 aaPredicted RBP3.51□□□□□ -1.85
LIG3-211ENST00000588713 NECAP2Q9NVZ3 263 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 CISD1Q9NZ45 108 aaKnown RBP3.51□□□□□ -1.85
LIG3-211ENST00000588713 C19orf25Q9UFG5 118 aaPredicted RBP3.51□□□□□ -1.85
LIG3-211ENST00000588713 OR14J1Q9UGF5 321 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 VAX2Q9UIW0 290 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 ANXA10Q9UJ72 324 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 RNF150Q9ULK6 438 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 HSF4Q9ULV5 492 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 COA3Q9Y2R0 106 aaPredicted RBP3.51□□□□□ -1.85
LIG3-211ENST00000588713 MMACHCQ9Y4U1 282 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 CLDN16Q9Y5I7 305 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 A0A096LPE4 126 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 TMED7-TICAM2A0A0A6YYA0 188 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 IGHV4-61A0A0C4DH41 118 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 A0A1W2PPZ6 126 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 ZNF727A8MUV8 499 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 A8MXE2 369 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 AHRRA9YTQ3 701 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 HRKO00198 91 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 TIMM23O14925 209 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 XRCC2O43543 280 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 KNG1P01042 644 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 TYMSP04818 313 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 SNRPCP09234 159 aaKnown RBP3.5□□□□□ -1.85
LIG3-211ENST00000588713 ZNF728P0DKX0 622 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 NR2C1P13056 603 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 GLRA1P23415 457 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 UCP1P25874 307 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 IL12BP29460 328 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 CD200P41217 278 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 FHITP49789 147 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 TMEM50BP56557 158 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 PIGPP57054 158 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 RANP62826 216 aaKnown RBP3.5□□□□□ -1.85
LIG3-211ENST00000588713 GRB2P62993 217 aaKnown RBP3.5□□□□□ -1.85
LIG3-211ENST00000588713 FOXF1Q12946 379 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 IL24Q13007 206 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 PMS2P11Q13670 270 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 ABCA11PQ4W5N1 156 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 PDZD11Q5EBL8 140 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 ACTL10Q5JWF8 245 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 Q6ZSR3 168 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 ABHD12BQ7Z5M8 362 aaPredicted RBP3.5□□□□□ -1.85
LIG3-211ENST00000588713 ANKRD37Q7Z713 158 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 ZNF573Q86YE8 665 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 LINC00346Q8IVM7 164 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 FBXL14Q8N1E6 418 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 OR8B12Q8NGG6 310 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 OR51T1Q8NGJ9 327 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 OR10S1Q8NGN2 331 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 OR2G3Q8NGZ4 309 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 OR2V1Q8NHB1 315 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 ABHD5Q8WTS1 349 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 RTN4IP1Q8WWV3 396 aaPredicted RBP3.5□□□□□ -1.85
LIG3-211ENST00000588713 TMEM234Q8WY98 164 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 ST8SIA1Q92185 356 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 TSLPQ969D9 159 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 PPP1R14AQ96A00 147 aa3.5□□□□□ -1.85
LIG3-211ENST00000588713 MOB3AQ96BX8 217 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms