RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 COLCA2A8K830 154 aa4.57□□□□□ -1.68
VMP1-208ENST00000588617 NSA2O95478 260 aaKnown RBP4.57□□□□□ -1.68
VMP1-208ENST00000588617 ALOX5APP20292 161 aa4.57□□□□□ -1.68
VMP1-208ENST00000588617 CDK2P24941 298 aa4.57□□□□□ -1.68
VMP1-208ENST00000588617 PPP1CCP36873 323 aaKnown RBP4.57□□□□□ -1.68
VMP1-208ENST00000588617 OR4D2P58180 307 aa4.57□□□□□ -1.68
VMP1-208ENST00000588617 RAB5BP61020 215 aa4.57□□□□□ -1.68
VMP1-208ENST00000588617 BSPH1Q075Z2 132 aa4.57□□□□□ -1.68
VMP1-208ENST00000588617 EIF4EBP1Q13541 118 aaPredicted RBP4.57□□□□□ -1.68
VMP1-208ENST00000588617 APOFQ13790 326 aa4.57□□□□□ -1.68
VMP1-208ENST00000588617 TMED2Q15363 201 aa4.57□□□□□ -1.68
VMP1-208ENST00000588617 SPA17Q15506 151 aa4.57□□□□□ -1.68
VMP1-208ENST00000588617 CLDN22Q8N7P3 220 aa4.57□□□□□ -1.68
VMP1-208ENST00000588617 ZNF709Q8N972 641 aa4.57□□□□□ -1.68
VMP1-208ENST00000588617 DIRAS2Q96HU8 199 aa4.57□□□□□ -1.68
VMP1-208ENST00000588617 FKBP14Q9NWM8 211 aa4.57□□□□□ -1.68
VMP1-208ENST00000588617 ZNF835Q9Y2P0 537 aa4.57□□□□□ -1.68
VMP1-208ENST00000588617 BRWD3Q6RI45 1802 aa4.57□□□□□ -1.68
VMP1-208ENST00000588617 HECW1Q76N89 1606 aa4.57□□□□□ -1.68
VMP1-208ENST00000588617 CEP170Q5SW79 1584 aa4.57□□□□□ -1.68
VMP1-208ENST00000588617 EHBP1L1Q8N3D4 1523 aa4.56□□□□□ -1.68
VMP1-208ENST00000588617 COL27A1Q8IZC6 1860 aaPredicted RBP4.56□□□□□ -1.68
VMP1-208ENST00000588617 CCNB3Q8WWL7 1395 aa4.56□□□□□ -1.68
VMP1-208ENST00000588617 KIF15Q9NS87 1388 aa4.56□□□□□ -1.68
VMP1-208ENST00000588617 IGKV1OR2-108A0A075B7D4 117 aa4.56□□□□□ -1.68
VMP1-208ENST00000588617 A8MUU9 505 aa4.56□□□□□ -1.68
VMP1-208ENST00000588617 K7EM74 188 aa4.56□□□□□ -1.68
VMP1-208ENST00000588617 CAPZBP47756 277 aa4.56□□□□□ -1.68
VMP1-208ENST00000588617 CDK9P50750 372 aaKnown RBP4.56□□□□□ -1.68
VMP1-208ENST00000588617 PRDX4Q13162 271 aa4.56□□□□□ -1.68
VMP1-208ENST00000588617 TMEM69Q5SWH9 247 aa4.56□□□□□ -1.68
VMP1-208ENST00000588617 LDLRAD2Q5SZI1 272 aa4.56□□□□□ -1.68
VMP1-208ENST00000588617 WASHC3Q9Y3C0 194 aa4.56□□□□□ -1.68
VMP1-208ENST00000588617 MRPS16Q9Y3D3 137 aaKnown RBP4.56□□□□□ -1.68
VMP1-208ENST00000588617 FIS1Q9Y3D6 152 aa4.56□□□□□ -1.68
VMP1-208ENST00000588617 OR51B4Q9Y5P0 310 aa4.56□□□□□ -1.68
VMP1-208ENST00000588617 MTUS2Q5JR59 1369 aa4.55□□□□□ -1.68
VMP1-208ENST00000588617 TRIP11Q15643 1979 aa4.55□□□□□ -1.68
VMP1-208ENST00000588617 IGHV3OR16-8A0A075B7F1 116 aa4.55□□□□□ -1.68
VMP1-208ENST00000588617 A0A0B4J2C4 111 aa4.55□□□□□ -1.68
VMP1-208ENST00000588617 RPL36A-HNRNPH2H7BZ11 118 aa4.55□□□□□ -1.68
VMP1-208ENST00000588617 EEF1E1O43324 174 aaKnown RBP4.55□□□□□ -1.68
VMP1-208ENST00000588617 SULT1B1O43704 296 aa4.55□□□□□ -1.68
VMP1-208ENST00000588617 IGHG2P01859 326 aa4.55□□□□□ -1.68
VMP1-208ENST00000588617 CTLA4P16410 223 aa4.55□□□□□ -1.68
VMP1-208ENST00000588617 CRABP2P29373 138 aa4.55□□□□□ -1.68
VMP1-208ENST00000588617 MAP2K4P45985 399 aa4.55□□□□□ -1.68
VMP1-208ENST00000588617 GDI2P50395 445 aaKnown RBP4.55□□□□□ -1.68
VMP1-208ENST00000588617 RBX1P62877 108 aa4.55□□□□□ -1.68
VMP1-208ENST00000588617 RPUSD1Q9UJJ7 312 aaKnown RBP4.55□□□□□ -1.68
VMP1-208ENST00000588617 KMT2EQ8IZD2 1858 aa4.55□□□□□ -1.68
VMP1-208ENST00000588617 ARHGEF11O15085 1522 aa4.55□□□□□ -1.68
VMP1-208ENST00000588617 EPRSP07814 1512 aaKnown RBP4.55□□□□□ -1.68
VMP1-208ENST00000588617 NOTCH3Q9UM47 2321 aa4.55□□□□□ -1.68
VMP1-208ENST00000588617 IGKV2-28A0A075B6P5 120 aa4.54□□□□□ -1.68
VMP1-208ENST00000588617 IGKV6D-41A0A0C4DH26 115 aa4.54□□□□□ -1.68
VMP1-208ENST00000588617 LINC00862A6NCI5 91 aa4.54□□□□□ -1.68
VMP1-208ENST00000588617 H3BMM0 161 aa4.54□□□□□ -1.68
VMP1-208ENST00000588617 M0R381 172 aa4.54□□□□□ -1.68
VMP1-208ENST00000588617 IGKV2D-28P01615 120 aa4.54□□□□□ -1.68
VMP1-208ENST00000588617 IGLV3-27P01718 113 aa4.54□□□□□ -1.68
VMP1-208ENST00000588617 TMEM33P57088 247 aa4.54□□□□□ -1.68
VMP1-208ENST00000588617 ZNF550Q7Z398 422 aa4.54□□□□□ -1.68
VMP1-208ENST00000588617 SH2D6Q7Z4S9 175 aa4.54□□□□□ -1.68
VMP1-208ENST00000588617 SLC35B4Q969S0 331 aa4.54□□□□□ -1.68
VMP1-208ENST00000588617 UBE2WQ96B02 151 aa4.54□□□□□ -1.68
VMP1-208ENST00000588617 LINC00167Q96N53 147 aa4.54□□□□□ -1.68
VMP1-208ENST00000588617 MIA2Q96PC5 1412 aa4.54□□□□□ -1.68
VMP1-208ENST00000588617 SHROOM2Q13796 1616 aa4.54□□□□□ -1.68
VMP1-208ENST00000588617 FLT4P35916 1363 aa4.53□□□□□ -1.68
VMP1-208ENST00000588617 SLIT3O75094 1523 aa4.53□□□□□ -1.68
VMP1-208ENST00000588617 SMIM9A6NGZ8 99 aa4.53□□□□□ -1.68
VMP1-208ENST00000588617 FADS1O60427 444 aa4.53□□□□□ -1.68
VMP1-208ENST00000588617 OPN1SWP03999 348 aa4.53□□□□□ -1.68
VMP1-208ENST00000588617 OR10J1P30954 320 aa4.53□□□□□ -1.68
VMP1-208ENST00000588617 CA7P43166 264 aa4.53□□□□□ -1.68
VMP1-208ENST00000588617 MARCKSL1P49006 195 aa4.53□□□□□ -1.68
VMP1-208ENST00000588617 IFITM2Q01629 132 aa4.53□□□□□ -1.68
VMP1-208ENST00000588617 C1orf194Q5T5A4 169 aa4.53□□□□□ -1.68
VMP1-208ENST00000588617 KPRPQ5T749 579 aaPredicted RBP4.53□□□□□ -1.68
VMP1-208ENST00000588617 BAP18Q8IXM2 172 aa4.53□□□□□ -1.68
VMP1-208ENST00000588617 TMEM86BQ8N661 226 aa4.53□□□□□ -1.68
VMP1-208ENST00000588617 ANP32BQ92688 251 aaKnown RBP4.53□□□□□ -1.68
VMP1-208ENST00000588617 HIST1H2BAQ96A08 127 aa4.53□□□□□ -1.68
VMP1-208ENST00000588617 TAS2R1Q9NYW7 299 aa4.53□□□□□ -1.68
VMP1-208ENST00000588617 MYOM3Q5VTT5 1437 aa4.53□□□□□ -1.68
VMP1-208ENST00000588617 FGD6Q6ZV73 1430 aa4.53□□□□□ -1.68
VMP1-208ENST00000588617 RAPGEF6Q8TEU7 1601 aa4.53□□□□□ -1.68
VMP1-208ENST00000588617 CLASP1Q7Z460 1538 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 NCOA2Q15596 1464 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 SCN4AP35499 1836 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 H3BQ85 93 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 CHP2O43745 196 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 FSTL3O95633 263 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 ZNF286BP0CG31 522 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 ZNF32P17041 273 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 PRPS1L1P21108 318 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 DAPP51397 102 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 GLO1Q04760 184 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 SBSNQ6UWP8 590 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms