RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 PITPNAQ00169 270 aa12.29□□□□□ -0.44
ERCC1-206ENST00000588300 AKIRIN2Q53H80 203 aa12.29□□□□□ -0.44
ERCC1-206ENST00000588300 RNLSQ5VYX0 342 aa12.29□□□□□ -0.44
ERCC1-206ENST00000588300 UNQ5815/PRO19632Q6UWF5 114 aa12.29□□□□□ -0.44
ERCC1-206ENST00000588300 CEACAM19Q7Z692 300 aa12.29□□□□□ -0.44
ERCC1-206ENST00000588300 OR6M1Q8NGM8 313 aa12.29□□□□□ -0.44
ERCC1-206ENST00000588300 MUC7Q8TAX7 377 aa12.29□□□□□ -0.44
ERCC1-206ENST00000588300 ARPC1AQ92747 370 aa12.29□□□□□ -0.44
ERCC1-206ENST00000588300 FLYWCH2Q96CP2 140 aaKnown RBP12.29□□□□□ -0.44
ERCC1-206ENST00000588300 AGMATQ9BSE5 352 aa12.29□□□□□ -0.44
ERCC1-206ENST00000588300 FAM103A1Q9BTL3 118 aaKnown RBP12.29□□□□□ -0.44
ERCC1-206ENST00000588300 URM1Q9BTM9 101 aaKnown RBP12.29□□□□□ -0.44
ERCC1-206ENST00000588300 SLA2Q9H6Q3 261 aa12.29□□□□□ -0.44
ERCC1-206ENST00000588300 METTL1Q9UBP6 276 aaKnown RBP12.29□□□□□ -0.44
ERCC1-206ENST00000588300 A0A0A6YYD4 124 aa12.28□□□□□ -0.44
ERCC1-206ENST00000588300 IGHV3-11P01762 117 aa12.28□□□□□ -0.44
ERCC1-206ENST00000588300 HSPB1P04792 205 aaKnown RBP12.28□□□□□ -0.44
ERCC1-206ENST00000588300 FRMD6-AS1P0C7T7 363 aa12.28□□□□□ -0.44
ERCC1-206ENST00000588300 CD37P11049 281 aa12.28□□□□□ -0.44
ERCC1-206ENST00000588300 CEACAM6P40199 344 aa12.28□□□□□ -0.44
ERCC1-206ENST00000588300 TPPP2P59282 170 aa12.28□□□□□ -0.44
ERCC1-206ENST00000588300 ZNF562Q6V9R5 426 aa12.28□□□□□ -0.44
ERCC1-206ENST00000588300 OVCH2Q7RTZ1 564 aa12.28□□□□□ -0.44
ERCC1-206ENST00000588300 LFNGQ8NES3 379 aa12.28□□□□□ -0.44
ERCC1-206ENST00000588300 MS4A10Q96PG2 267 aa12.28□□□□□ -0.44
ERCC1-206ENST00000588300 OR4C12Q96R67 309 aa12.28□□□□□ -0.44
ERCC1-206ENST00000588300 CLCC1Q96S66 551 aa12.28□□□□□ -0.44
ERCC1-206ENST00000588300 TSNAXQ99598 290 aaKnown RBP12.28□□□□□ -0.44
ERCC1-206ENST00000588300 C11orf54Q9H0W9 315 aaPredicted RBP12.28□□□□□ -0.44
ERCC1-206ENST00000588300 LPAR5Q9H1C0 372 aa12.28□□□□□ -0.44
ERCC1-206ENST00000588300 OR1A1Q9P1Q5 309 aa12.28□□□□□ -0.44
ERCC1-206ENST00000588300 AK3Q9UIJ7 227 aa12.28□□□□□ -0.44
ERCC1-206ENST00000588300 GAB2Q9UQC2 676 aa12.28□□□□□ -0.44
ERCC1-206ENST00000588300 ARPC1BO15143 372 aaKnown RBP12.27□□□□□ -0.45
ERCC1-206ENST00000588300 SOCS1O15524 211 aa12.27□□□□□ -0.45
ERCC1-206ENST00000588300 SPDEFO95238 335 aa12.27□□□□□ -0.45
ERCC1-206ENST00000588300 CA2P00918 260 aa12.27□□□□□ -0.45
ERCC1-206ENST00000588300 TFAP2AP05549 437 aa12.27□□□□□ -0.45
ERCC1-206ENST00000588300 UCHL1P09936 223 aa12.27□□□□□ -0.45
ERCC1-206ENST00000588300 CPEP16870 476 aa12.27□□□□□ -0.45
ERCC1-206ENST00000588300 PSG5Q15238 335 aa12.27□□□□□ -0.45
ERCC1-206ENST00000588300 SPHARQ15513 63 aa12.27□□□□□ -0.45
ERCC1-206ENST00000588300 MED22Q15528 200 aa12.27□□□□□ -0.45
ERCC1-206ENST00000588300 OGFRL1Q5TC84 451 aaPredicted RBP12.27□□□□□ -0.45
ERCC1-206ENST00000588300 HDHD3Q9BSH5 251 aaPredicted RBP12.27□□□□□ -0.45
ERCC1-206ENST00000588300 ZMAT4Q9H898 229 aa12.27□□□□□ -0.45
ERCC1-206ENST00000588300 PLGRKTQ9HBL7 147 aa12.27□□□□□ -0.45
ERCC1-206ENST00000588300 C12orf4Q9NQ89 552 aa12.27□□□□□ -0.45
ERCC1-206ENST00000588300 ZNF221Q9UK13 617 aa12.27□□□□□ -0.45
ERCC1-206ENST00000588300 HSF4Q9ULV5 492 aa12.27□□□□□ -0.45
ERCC1-206ENST00000588300 LSM2Q9Y333 95 aaKnown RBP12.27□□□□□ -0.45
ERCC1-206ENST00000588300 TRIM64CA6NLI5 447 aa12.26□□□□□ -0.45
ERCC1-206ENST00000588300 APOA2P02652 100 aa12.26□□□□□ -0.45
ERCC1-206ENST00000588300 ARSBP15848 533 aa12.26□□□□□ -0.45
ERCC1-206ENST00000588300 RPS16P62249 146 aaKnown RBP12.26□□□□□ -0.45
ERCC1-206ENST00000588300 CASC10Q5T4H9 136 aa12.26□□□□□ -0.45
ERCC1-206ENST00000588300 FAM89BQ8N5H3 189 aa12.26□□□□□ -0.45
ERCC1-206ENST00000588300 DRAXINQ8NBI3 349 aaPredicted RBP12.26□□□□□ -0.45
ERCC1-206ENST00000588300 PTX4Q96A99 478 aa12.26□□□□□ -0.45
ERCC1-206ENST00000588300 RHOVQ96L33 236 aa12.26□□□□□ -0.45
ERCC1-206ENST00000588300 ELOVL1Q9BW60 279 aa12.26□□□□□ -0.45
ERCC1-206ENST00000588300 VCXQ9H320 206 aa12.26□□□□□ -0.45
ERCC1-206ENST00000588300 PTGES3LE9PB15 166 aa12.25□□□□□ -0.45
ERCC1-206ENST00000588300 SLC17A2O00624 439 aa12.25□□□□□ -0.45
ERCC1-206ENST00000588300 CASQ2O14958 399 aaPredicted RBP12.25□□□□□ -0.45
ERCC1-206ENST00000588300 TRGV3P03979 118 aa12.25□□□□□ -0.45
ERCC1-206ENST00000588300 IGKV1-16P04430 117 aa12.25□□□□□ -0.45
ERCC1-206ENST00000588300 SCTP09683 121 aa12.25□□□□□ -0.45
ERCC1-206ENST00000588300 P2RY14Q15391 338 aa12.25□□□□□ -0.45
ERCC1-206ENST00000588300 SRSF7Q16629 238 aaKnown RBP eCLIP12.25□□□□□ -0.45
ERCC1-206ENST00000588300 PDPNQ86YL7 162 aa12.25□□□□□ -0.45
ERCC1-206ENST00000588300 UFD1Q92890 307 aa12.25□□□□□ -0.45
ERCC1-206ENST00000588300 Q9N2K0 584 aa12.25□□□□□ -0.45
ERCC1-206ENST00000588300 SCN3BQ9NY72 215 aa12.25□□□□□ -0.45
ERCC1-206ENST00000588300 STUB1Q9UNE7 303 aa12.25□□□□□ -0.45
ERCC1-206ENST00000588300 DYNC2H1Q8NCM8 4307 aaKnown RBP12.25□□□□□ -0.45
ERCC1-206ENST00000588300 DNAH7Q8WXX0 4024 aa12.25□□□□□ -0.45
ERCC1-206ENST00000588300 FOXI3A8MTJ6 420 aaPredicted RBP12.24□□□□□ -0.45
ERCC1-206ENST00000588300 PROP1O75360 226 aa12.24□□□□□ -0.45
ERCC1-206ENST00000588300 VEGFCP49767 419 aa12.24□□□□□ -0.45
ERCC1-206ENST00000588300 FXYD3Q14802 87 aa12.24□□□□□ -0.45
ERCC1-206ENST00000588300 LIPKQ5VXJ0 399 aa12.24□□□□□ -0.45
ERCC1-206ENST00000588300 ZNF383Q8NA42 475 aa12.24□□□□□ -0.45
ERCC1-206ENST00000588300 POC5Q8NA72 575 aa12.24□□□□□ -0.45
ERCC1-206ENST00000588300 GRPEL2Q8TAA5 225 aa12.24□□□□□ -0.45
ERCC1-206ENST00000588300 TMEM203Q969S6 136 aa12.24□□□□□ -0.45
ERCC1-206ENST00000588300 ARHGAP5-AS1Q96IT6 56 aa12.24□□□□□ -0.45
ERCC1-206ENST00000588300 CMSS1Q9BQ75 279 aaKnown RBP12.24□□□□□ -0.45
ERCC1-206ENST00000588300 ZNF355PQ9NSJ1 428 aa12.24□□□□□ -0.45
ERCC1-206ENST00000588300 C13orf42A0A1B0GVH6 325 aa12.23□□□□□ -0.45
ERCC1-206ENST00000588300 H3BUA1 57 aa12.23□□□□□ -0.45
ERCC1-206ENST00000588300 SLC25A17O43808 307 aa12.23□□□□□ -0.45
ERCC1-206ENST00000588300 ARL6IP5O75915 188 aa12.23□□□□□ -0.45
ERCC1-206ENST00000588300 SNRPBP14678 240 aaKnown RBP12.23□□□□□ -0.45
ERCC1-206ENST00000588300 TMEM50BP56557 158 aa12.23□□□□□ -0.45
ERCC1-206ENST00000588300 RAB11BQ15907 218 aa12.23□□□□□ -0.45
ERCC1-206ENST00000588300 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.23□□□□□ -0.45
ERCC1-206ENST00000588300 GFI1Q99684 422 aa12.23□□□□□ -0.45
ERCC1-206ENST00000588300 RSRP1Q9BUV0 290 aa12.23□□□□□ -0.45
ERCC1-206ENST00000588300 PECRQ9BY49 303 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms