RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 H3BUX3 64 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 AMY2AP04746 511 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 AKAIN1P0CW23 69 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 CT45A6P0DMU7 189 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 CT45A5P0DMU8 189 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 CT45A7P0DMV0 189 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 TBPP20226 339 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 DYNLT3P51808 116 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 LY6EQ16553 131 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 CCBE1Q6UXH8 406 aaPredicted RBP8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 GLDNQ6ZMI3 551 aaPredicted RBP8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 MOB3BQ86TA1 216 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 TMEM17Q86X19 198 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 OR8H3Q8N146 312 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 TOMM5Q8N4H5 51 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 ZNF645Q8N7E2 425 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 OR56B4Q8NH76 319 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 SECTM1Q8WVN6 248 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 MOB3AQ96BX8 217 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 S1PR3Q99500 378 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 NABP2Q9BQ15 211 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 GHITMQ9H3K2 345 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 MXRA5Q9NR99 2828 aa8.6□□□□□ -1.03
SMARCA4-213ENST00000587988 FAM90A9PA6NNJ1 464 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 M0R1X1 148 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 TCF21O43680 179 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 IFNA6P05013 189 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 IL7P13232 177 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 PPP5CP53041 499 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 HERV-K104P61576 105 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 HABP2Q14520 560 aaPredicted RBP8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 AANATQ16613 207 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 AADACL3Q5VUY0 350 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 ZNF57Q68EA5 555 aaPredicted RBP8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 CCDC144NLQ6NUI1 221 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 FAM71F2Q6NXP2 309 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 ZNF818PQ6ZRF7 136 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 LHFPL1Q86WI0 220 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 FAM216AQ8WUB2 273 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 SSMEM1Q8WWF3 244 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 MRGPRFQ96AM1 343 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 GPHA2Q96T91 129 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 CHIAQ9BZP6 476 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 SLC5A7Q9GZV3 580 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 DPAGT1Q9H3H5 408 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 HRASLSQ9HDD0 168 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 ABCB10Q9NRK6 738 aa8.59□□□□□ -1.03
SMARCA4-213ENST00000587988 LINC00854A0A1B0GVQ3 168 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 A6NDX4 124 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 TXNL1O43396 289 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 IFNA2P01563 188 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 IGKV1D-33P01593 117 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 IGKV1-33P01594 117 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 SNRNP70P08621 437 aaKnown RBP8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 GNRHRP30968 328 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 BRS3P32247 399 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 DUTP33316 252 aaKnown RBP8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 RPL30P62888 115 aaKnown RBP8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 UBA52P62987 128 aaKnown RBP8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 LSAMPQ13449 338 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 EIF4EBP1Q13541 118 aaPredicted RBP8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 ZNF846Q147U1 533 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 MEF2DQ14814 521 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 SCGB2B2Q4G0G5 96 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 TRIQKQ629K1 86 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 TMEM219Q86XT9 240 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 ARRDC1Q8N5I2 433 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 TMEM86BQ8N661 226 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 ZNF383Q8NA42 475 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 OR51S1Q8NGJ8 323 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 CAPSLQ8WWF8 208 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 RITA1Q96K30 269 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 TCF19Q9Y242 345 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 POMT1Q9Y6A1 747 aa8.58□□□□□ -1.04
SMARCA4-213ENST00000587988 A0A0A6YYJ9 748 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 LINC00473A8K010 186 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 DISC1C4P0D8 188 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 H0YJW9 148 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 CLDN34H7C241 214 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 TNFSF12O43508 249 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 SLC22A5O76082 557 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 CD1BP29016 333 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 CD40LGP29965 261 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 ARHGDIBP52566 201 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 UCP3P55916 312 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 AP3S2P59780 193 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 EBI3Q14213 229 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 HNF4GQ14541 408 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 THNSL2Q86YJ6 484 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 OR5AN1Q8NGI8 311 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 OR13C8Q8NGS7 320 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 OR5R1Q8NH85 324 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 TERB2Q8NHR7 220 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 DDB2Q92466 427 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 TAF15Q92804 592 aaKnown RBP eCLIP8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 JMJD8Q96S16 334 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 CCDC32Q9BV29 185 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 WDR12Q9GZL7 423 aaKnown RBP8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 MCUBQ9NWR8 336 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 949.2 ms