RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 SDHAF2Q9NX18 166 aa8.37□□□□□ -1.07
APOC1-201ENST00000586638 TAS2R3Q9NYW6 316 aa8.37□□□□□ -1.07
APOC1-201ENST00000586638 COMMD9Q9P000 198 aa8.37□□□□□ -1.07
APOC1-201ENST00000586638 MBD2Q9UBB5 411 aa8.37□□□□□ -1.07
APOC1-201ENST00000586638 DOCK11Q5JSL3 2073 aa8.37□□□□□ -1.07
APOC1-201ENST00000586638 FLNAP21333 2647 aaKnown RBP8.37□□□□□ -1.07
APOC1-201ENST00000586638 HRNRQ86YZ3 2850 aaPredicted RBP8.37□□□□□ -1.07
APOC1-201ENST00000586638 USF3Q68DE3 2245 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 NSD1Q96L73 2696 aaPredicted RBP8.36□□□□□ -1.07
APOC1-201ENST00000586638 A0A0G2JRQ6 117 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 ARPC5O15511 151 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 NDUFA2O43678 99 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 SCGB1D2O95969 90 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 IFNA21P01568 189 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 WNT2P09544 360 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 CXCL2P19875 107 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 GPR12P47775 334 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 ERVFRD-1P60508 538 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 S100A10P60903 97 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 SRPXP78539 464 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 MRPS11P82912 194 aaKnown RBP8.36□□□□□ -1.07
APOC1-201ENST00000586638 IFITM2Q01629 132 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 EIF4EBP1Q13541 118 aaPredicted RBP8.36□□□□□ -1.07
APOC1-201ENST00000586638 IAH1Q2TAA2 248 aaPredicted RBP8.36□□□□□ -1.07
APOC1-201ENST00000586638 RPL39P5Q59GN2 51 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 OR2B11Q5JQS5 317 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 ZNF841Q6ZN19 808 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 ZNF695Q8IW36 515 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 ZNF439Q8NDP4 499 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 OR8B3Q8NGG8 313 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 TCTEX1D2Q8WW35 142 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 RAB1CQ92928 201 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 TIMD4Q96H15 378 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 C2orf50Q96LR7 162 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 OR8B2Q96RD0 313 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 CHODLQ9H9P2 273 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 ZNRD1Q9P1U0 126 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 LPAR3Q9UBY5 353 aa8.36□□□□□ -1.07
APOC1-201ENST00000586638 RPUSD1Q9UJJ7 312 aaKnown RBP8.36□□□□□ -1.07
APOC1-201ENST00000586638 RNF212BA8MTL3 300 aa8.35□□□□□ -1.07
APOC1-201ENST00000586638 INAFM1C9JVW0 142 aa8.35□□□□□ -1.07
APOC1-201ENST00000586638 L7N2F9 121 aa8.35□□□□□ -1.07
APOC1-201ENST00000586638 TSC22D2O75157 780 aa8.35□□□□□ -1.07
APOC1-201ENST00000586638 MPC2O95563 127 aa8.35□□□□□ -1.07
APOC1-201ENST00000586638 IGKV1-39P01597 117 aa8.35□□□□□ -1.07
APOC1-201ENST00000586638 IGKV1D-39P04432 117 aa8.35□□□□□ -1.07
APOC1-201ENST00000586638 EPHA1P21709 976 aa8.35□□□□□ -1.07
APOC1-201ENST00000586638 GPR6P46095 362 aaPredicted RBP8.35□□□□□ -1.07
APOC1-201ENST00000586638 DLX6P56179 175 aa8.35□□□□□ -1.07
APOC1-201ENST00000586638 RPL30P62888 115 aaKnown RBP8.35□□□□□ -1.07
APOC1-201ENST00000586638 RAB32Q13637 225 aa8.35□□□□□ -1.07
APOC1-201ENST00000586638 MSMO1Q15800 293 aa8.35□□□□□ -1.07
APOC1-201ENST00000586638 LGALSLQ3ZCW2 172 aaPredicted RBP8.35□□□□□ -1.07
APOC1-201ENST00000586638 TMEM155Q4W5P6 130 aa8.35□□□□□ -1.07
APOC1-201ENST00000586638 TMEM200BQ69YZ2 307 aa8.35□□□□□ -1.07
APOC1-201ENST00000586638 C11orf87Q6NUJ2 197 aa8.35□□□□□ -1.07
APOC1-201ENST00000586638 RBPMSQ93062 196 aaKnown RBP8.35□□□□□ -1.07
APOC1-201ENST00000586638 NEIL1Q96FI4 390 aaPredicted RBP8.35□□□□□ -1.07
APOC1-201ENST00000586638 TMEM56Q96MV1 263 aa8.35□□□□□ -1.07
APOC1-201ENST00000586638 CCL19Q99731 98 aa8.35□□□□□ -1.07
APOC1-201ENST00000586638 GSKIPQ9P0R6 139 aa8.35□□□□□ -1.07
APOC1-201ENST00000586638 TMEM56-RWDD3S4R434 201 aa8.35□□□□□ -1.07
APOC1-201ENST00000586638 TRBV23-1A0A0A0MS06 115 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 DUXBA0A1W2PPF3 345 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 LINC00473A8K010 186 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 C17orf98A8MV24 154 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 F5H0A9 414 aaPredicted RBP8.34□□□□□ -1.07
APOC1-201ENST00000586638 H0YIZ8 118 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 M0R1X1 148 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 FSTL3O95633 263 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 CDS2O95674 445 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 IGHV4-39P01824 125 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 SERPINE2P07093 398 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 SLC25A4P12235 298 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 RAB7AP51149 207 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 ZNF134P52741 427 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 EFNA4P52798 201 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 LINC00205P59089 165 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 CYCSP99999 105 aaKnown RBP8.34□□□□□ -1.07
APOC1-201ENST00000586638 FGL1Q08830 312 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 ZNF816Q0VGE8 651 aaPredicted RBP8.34□□□□□ -1.07
APOC1-201ENST00000586638 CATR1Q13166 79 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 IL15RAQ13261 267 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 TMEM30BQ3MIR4 351 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 CT45A1Q5HYN5 189 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 FOXRED2Q8IWF2 684 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 ZNF525Q8N782 197 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 ZBTB34Q8NCN2 500 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 OR52M1Q8NGK5 317 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 CT45A3Q8NHU0 189 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 RNASE11Q8TAA1 199 aaKnown RBP8.34□□□□□ -1.07
APOC1-201ENST00000586638 THAP6Q8TBB0 222 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 IGFBPL1Q8WX77 278 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 DCUN1D4Q92564 292 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 IL22RA2Q969J5 263 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 PERPQ96FX8 193 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 AGMATQ9BSE5 352 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 LINC00574Q9H8X3 128 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 OR5AC2Q9NZP5 309 aa8.34□□□□□ -1.07
APOC1-201ENST00000586638 MIOXQ9UGB7 285 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms