RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 CSPG4Q6UVK1 2322 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 WNK2Q9Y3S1 2297 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 KIAA2026Q5HYC2 2103 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 C3orf85A0A1B0GTC6 90 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 RAB29O14966 203 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 RBFOX2O43251 390 aaKnown RBP eCLIP10.36□□□□□ -0.75
VMP1-202ENST00000585847 ENSAO43768 121 aaKnown RBP10.36□□□□□ -0.75
VMP1-202ENST00000585847 ZNF16P17020 682 aaPredicted RBP10.36□□□□□ -0.75
VMP1-202ENST00000585847 F2RP25116 425 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 UCP1P25874 307 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 IL3RAP26951 378 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 GZMKP49863 264 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 ARHGDIBP52566 201 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 LOXL3P58215 753 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 GNB2P62879 340 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 SUPT4H1P63272 117 aaKnown RBP10.36□□□□□ -0.75
VMP1-202ENST00000585847 BAMBIQ13145 260 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 FCN2Q15485 313 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 C17orf58Q2M2W7 97 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 ZFP69Q49AA0 526 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 MORN2Q502X0 79 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 LIAT1Q6ZQX7 453 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 LINC01356Q8N9X3 169 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 LY6G5BQ8NDX9 201 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 ZNF596Q8TC21 504 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 CAPSLQ8WWF8 208 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 H1FXQ92522 213 aaKnown RBP10.36□□□□□ -0.75
VMP1-202ENST00000585847 TMEM56Q96MV1 263 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 ABHD14AQ9BUJ0 271 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 C19orf12Q9NSK7 152 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 TMEM56-RWDD3S4R434 201 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 ZANQ9Y493 2812 aa10.36□□□□□ -0.75
VMP1-202ENST00000585847 C17orf98A8MV24 154 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 B4DSR2 109 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 TXNL1O43396 289 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 CD5LO43866 347 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 FOXH1O75593 365 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 CDS2O95674 445 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 C1QBP02746 253 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 SERPINE2P07093 398 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 MSMBP08118 114 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 OR8U9P0C7N5 309 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 C4BPBP20851 252 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 GPR12P47775 334 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 TMEM200BQ69YZ2 307 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 CYB5R2Q6BCY4 276 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 GSG1LQ6UXU4 331 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 ZNF818PQ6ZRF7 136 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 SLC25A48Q6ZT89 311 aaKnown RBP10.35□□□□□ -0.75
VMP1-202ENST00000585847 TCF23Q7RTU1 214 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 FAM219AQ8IW50 185 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 TPRX1Q8N7U7 411 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 ADAD2Q8NCV1 583 aaKnown RBP10.35□□□□□ -0.75
VMP1-202ENST00000585847 OR8U1Q8NH10 309 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 ABHD14BQ96IU4 210 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 ST6GAL2Q96JF0 529 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 HYLS1Q96M11 299 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 S1PR3Q99500 378 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 AGMATQ9BSE5 352 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 BEX2Q9BXY8 128 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 UNKLQ9H9P5 680 aaKnown RBP10.35□□□□□ -0.75
VMP1-202ENST00000585847 BEX1Q9HBH7 125 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 KCNS2Q9ULS6 477 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 SESN1Q9Y6P5 492 aa10.35□□□□□ -0.75
VMP1-202ENST00000585847 ATRQ13535 2644 aa10.34□□□□□ -0.75
VMP1-202ENST00000585847 PPIAL4CA0A0B4J2A2 164 aa10.34□□□□□ -0.75
VMP1-202ENST00000585847 IGKV1D-13A0A0B4J2D9 117 aa10.34□□□□□ -0.75
VMP1-202ENST00000585847 IGHV2-70DA0A0C4DH43 119 aa10.34□□□□□ -0.75
VMP1-202ENST00000585847 PGLYRP1O75594 196 aaPredicted RBP10.34□□□□□ -0.75
VMP1-202ENST00000585847 IGKV1-13P0DP09 117 aa10.34□□□□□ -0.75
VMP1-202ENST00000585847 SLC25A6P12236 298 aa10.34□□□□□ -0.75
VMP1-202ENST00000585847 PPP1CCP36873 323 aaKnown RBP10.34□□□□□ -0.75
VMP1-202ENST00000585847 ZNF137PP52743 207 aa10.34□□□□□ -0.75
VMP1-202ENST00000585847 DVL1P1P54792 670 aaPredicted RBP10.34□□□□□ -0.75
VMP1-202ENST00000585847 ERVFRD-1P60508 538 aa10.34□□□□□ -0.75
VMP1-202ENST00000585847 TMEM187Q14656 261 aa10.34□□□□□ -0.75
VMP1-202ENST00000585847 TBC1D26Q86UD7 250 aa10.34□□□□□ -0.75
VMP1-202ENST00000585847 OR52L2PQ8NGH6 319 aa10.34□□□□□ -0.75
VMP1-202ENST00000585847 OR9G1Q8NH87 305 aa10.34□□□□□ -0.75
VMP1-202ENST00000585847 AIFM2Q9BRQ8 373 aa10.34□□□□□ -0.75
VMP1-202ENST00000585847 TMPRSS13Q9BYE2 586 aa10.34□□□□□ -0.75
VMP1-202ENST00000585847 NMES1Q9C002 83 aa10.34□□□□□ -0.75
VMP1-202ENST00000585847 OR2D2Q9H210 308 aa10.34□□□□□ -0.75
VMP1-202ENST00000585847 PRELID3BQ9Y3B1 194 aa10.34□□□□□ -0.75
VMP1-202ENST00000585847 AMMECR1Q9Y4X0 333 aaPredicted RBP10.34□□□□□ -0.75
VMP1-202ENST00000585847 INSIG2Q9Y5U4 225 aa10.34□□□□□ -0.75
VMP1-202ENST00000585847 KPTNQ9Y664 436 aa10.34□□□□□ -0.75
VMP1-202ENST00000585847 MXRA5Q9NR99 2828 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 LOC105371242A0A075B767 164 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 TRAV39A0A0B4J263 110 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 ST8SIA5O15466 376 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 TGFAP01135 160 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 AVPP01185 164 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 PPIAL4GP0DN37 164 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 PI3P19957 117 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 VDAC1P21796 283 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 DLX6P56179 175 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 PAX8Q06710 450 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 ZNF273Q14593 569 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 PHLDA2Q53GA4 152 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms