RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 DKK4Q9UBT3 224 aa10.46□□□□□ -0.73
SMARCA4-208ENST00000585799 SHOXO15266 292 aa10.46□□□□□ -0.74
SMARCA4-208ENST00000585799 OR8U8P0C7N1 319 aa10.46□□□□□ -0.74
SMARCA4-208ENST00000585799 FGF7P21781 194 aa10.46□□□□□ -0.74
SMARCA4-208ENST00000585799 UBE2KP61086 200 aa10.46□□□□□ -0.74
SMARCA4-208ENST00000585799 ABHD5Q8WTS1 349 aa10.46□□□□□ -0.74
SMARCA4-208ENST00000585799 DCAF16Q9NXF7 216 aa10.46□□□□□ -0.74
SMARCA4-208ENST00000585799 COL5A1P20908 1838 aaPredicted RBP10.46□□□□□ -0.74
SMARCA4-208ENST00000585799 A0A0G2JRQ6 117 aa10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 A0A1B0GU03 582 aa10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 CEACAM18A8MTB9 384 aa10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 SULT1A2P50226 295 aa10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 PLGLAQ15195 96 aa10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 PRR7Q8TB68 274 aa10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 BOD1Q96IK1 185 aa10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 SLC25A22Q9H936 323 aa10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 RAB19A4D1S5 217 aa10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 MBD3L4A6NDZ8 208 aaPredicted RBP10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 MBD3L3A6NE82 208 aaPredicted RBP10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 MBD3L5A6NJ08 208 aaPredicted RBP10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 NDUFB3O43676 98 aa10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 KRTAP27-1Q3LI81 207 aa10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 ZNF787Q6DD87 383 aa10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 IL34Q6ZMJ4 242 aa10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 MBD3L2Q8NHZ7 208 aaPredicted RBP10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 SAT2Q96F10 170 aaPredicted RBP10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 A8MXE2 369 aa10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 RPL31P62899 125 aaKnown RBP10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 PUSL1Q8N0Z8 303 aaKnown RBP10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 DTD1Q8TEA8 209 aa10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 CALYQ9NYX4 217 aa10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 TUBD1Q9UJT1 453 aa10.45□□□□□ -0.74
SMARCA4-208ENST00000585799 A0A0G2JNJ9 132 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 CD3EP07766 207 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 TBR1Q16650 682 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 CLEC12BQ2HXU8 276 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 PCSK4Q6UW60 755 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 CD177Q8N6Q3 437 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 ISOC2Q96AB3 205 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 ZNF665Q9H7R5 613 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 Q9UFV3 132 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 ARFGEF3Q5TH69 2177 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 A0A0U1RQK1 487 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 ZG16O60844 167 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 COX5AP20674 150 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 SULT1A1P50225 295 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 ZNF645Q8N7E2 425 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 ZDHHC16Q969W1 377 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 SNX22Q96L94 193 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 KIAA1324LA8MWY0 1029 aaPredicted RBP10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 LYNX1G3V0Z9 82 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 IFNA1P01562 189 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 LYNX1P0DP58 116 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 COX7A1P24310 79 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 ERVFRD-1P60508 538 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 SLC35E4Q6ICL7 350 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 Q6ZPA2 131 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 COQ2Q96H96 371 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 ATP5SQ99766 215 aa10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 USB1Q9BQ65 265 aaKnown RBP10.44□□□□□ -0.74
SMARCA4-208ENST00000585799 APELAP0DMC3 54 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 RPL30P62888 115 aaKnown RBP10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 ZNF146Q15072 292 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 Q6ZSR3 168 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 UBAC2Q8NBM4 344 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 LYRM2Q9NU23 88 aaPredicted RBP10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 HBE1P02100 147 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 GAPDHP04406 335 aaKnown RBP10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 SEC11BP0C7V7 166 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 DVL1P1P54792 670 aaPredicted RBP10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 UBE2G2P60604 165 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 Q6ZRM9 215 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 SEM1Q6ZVN7 128 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 GCSAMQ8N6F7 178 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 PINX1Q96BK5 328 aaKnown RBP10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 RPUSD4Q96CM3 377 aaKnown RBP10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 REG4Q9BYZ8 158 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 RBKSQ9H477 322 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 IGHV3-72A0A0B4J1Y9 119 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 hADV38S2A0JD32 116 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 ADH4P08319 380 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 TAGLN2P37802 199 aaKnown RBP10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 NPBWR1P48145 328 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 NUBP1P53384 320 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 SPRNQ5BIV9 151 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 LRRC10Q5BKY1 277 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 AVPI1Q5T686 147 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 NCR3LG1Q68D85 454 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 TMEM56Q96MV1 263 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 SLC25A10Q9UBX3 287 aaPredicted RBP10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 KPTNQ9Y664 436 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 TMEM56-RWDD3S4R434 201 aa10.43□□□□□ -0.74
SMARCA4-208ENST00000585799 NBL1P41271 181 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 UQCC3Q6UW78 93 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 ETV3LQ6ZN32 361 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 LILRB1Q8NHL6 650 aaPredicted RBP10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 OR4C12Q96R67 309 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 GCM1Q9NP62 436 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 CACFD1Q9UGQ2 172 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 TRAV38-1A0A0B4J264 116 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms