RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 C2orf68Q2NKX9 166 aa11□□□□□ -0.65
PRKCSH-202ENST00000585540 ABCA11PQ4W5N1 156 aa11□□□□□ -0.65
PRKCSH-202ENST00000585540 HOGA1Q86XE5 327 aa11□□□□□ -0.65
PRKCSH-202ENST00000585540 PDPNQ86YL7 162 aa11□□□□□ -0.65
PRKCSH-202ENST00000585540 FOXRED2Q8IWF2 684 aa11□□□□□ -0.65
PRKCSH-202ENST00000585540 H1FOOQ8IZA3 346 aaPredicted RBP11□□□□□ -0.65
PRKCSH-202ENST00000585540 COMMD1Q8N668 190 aa11□□□□□ -0.65
PRKCSH-202ENST00000585540 KLHDC1Q8N7A1 406 aa11□□□□□ -0.65
PRKCSH-202ENST00000585540 OR5AN1Q8NGI8 311 aa11□□□□□ -0.65
PRKCSH-202ENST00000585540 ZNF251Q9BRH9 671 aa11□□□□□ -0.65
PRKCSH-202ENST00000585540 MRPL20Q9BYC9 149 aaKnown RBP11□□□□□ -0.65
PRKCSH-202ENST00000585540 RABL2AQ9UBK7 228 aaPredicted RBP11□□□□□ -0.65
PRKCSH-202ENST00000585540 ADAM30Q9UKF2 790 aa11□□□□□ -0.65
PRKCSH-202ENST00000585540 RABL2BQ9UNT1 228 aa11□□□□□ -0.65
PRKCSH-202ENST00000585540 WASHC3Q9Y3C0 194 aa11□□□□□ -0.65
PRKCSH-202ENST00000585540 RBM7Q9Y580 266 aaKnown RBP11□□□□□ -0.65
PRKCSH-202ENST00000585540 MEIS3P1A6NDR6 274 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 RGS5O15539 181 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 IGHG2P01859 326 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 AMY1AP04745 511 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 AMY2AP04746 511 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 OR5H8P0DN80 308 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 RRASP10301 218 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 ARPC4P59998 168 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 BLCAPP62952 87 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 IGSF11Q5DX21 431 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 GVQW1Q8N7I0 195 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 BEST4Q8NFU0 473 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 OR4X2Q8NGF9 303 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 WIPF2Q8TF74 440 aaPredicted RBP10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 CHPT1Q8WUD6 406 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 BORCS5Q969J3 196 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 RASL11BQ9BPW5 248 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 ST6GALNAC5Q9BVH7 336 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 C6orf62Q9GZU0 229 aaPredicted RBP10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 PARP12Q9H0J9 701 aaKnown RBP10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 SCPEP1Q9HB40 452 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 KIAA1456Q9P272 454 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 EXTL2Q9UBQ6 330 aa10.99□□□□□ -0.65
PRKCSH-202ENST00000585540 IGHV3-72A0A0B4J1Y9 119 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 NCBP2LA6PVI3 153 aaKnown RBP10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 H0YJW9 148 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 SULT1C2O00338 296 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 FBXO24O75426 580 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 NDUFA3O95167 84 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 HLA-DQB1P01920 261 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 OPN1MWP04001 364 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 FCER2P06734 321 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 OPN1MW2P0DN77 364 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 OPN1MW3P0DN78 364 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 THBS3P49746 956 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 MMDQ15546 238 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 FAM71E2Q8N5Q1 922 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 Q8N9W7 124 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 NPBQ8NG41 125 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 TAF15Q92804 592 aaKnown RBP eCLIP10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 ABHD14BQ96IU4 210 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 NXF2Q9GZY0 626 aaKnown RBP10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 OR2D2Q9H210 308 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 NECAP2Q9NVZ3 263 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 ANAPC10Q9UM13 185 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 MRPS7Q9Y2R9 242 aaKnown RBP10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 OR2W1Q9Y3N9 320 aa10.98□□□□□ -0.65
PRKCSH-202ENST00000585540 AP4M1O00189 453 aa10.97□□□□□ -0.65
PRKCSH-202ENST00000585540 NBR2O15453 112 aa10.97□□□□□ -0.65
PRKCSH-202ENST00000585540 VSIG10L2P0DP72 767 aa10.97□□□□□ -0.65
PRKCSH-202ENST00000585540 PRSS3P35030 304 aa10.97□□□□□ -0.65
PRKCSH-202ENST00000585540 OR3A3P47888 321 aa10.97□□□□□ -0.65
PRKCSH-202ENST00000585540 LUMP51884 338 aaPredicted RBP10.97□□□□□ -0.65
PRKCSH-202ENST00000585540 TAS2R46P59540 309 aa10.97□□□□□ -0.65
PRKCSH-202ENST00000585540 SLC35B1P78383 322 aa10.97□□□□□ -0.65
PRKCSH-202ENST00000585540 HNF4GQ14541 408 aa10.97□□□□□ -0.65
PRKCSH-202ENST00000585540 SLC35E3Q7Z769 313 aa10.97□□□□□ -0.65
PRKCSH-202ENST00000585540 NDUFA11Q86Y39 141 aa10.97□□□□□ -0.65
PRKCSH-202ENST00000585540 SNX29P2Q8IUI4 249 aa10.97□□□□□ -0.65
PRKCSH-202ENST00000585540 ZNF645Q8N7E2 425 aa10.97□□□□□ -0.65
PRKCSH-202ENST00000585540 MCFD2Q8NI22 146 aa10.97□□□□□ -0.65
PRKCSH-202ENST00000585540 TSNAXQ99598 290 aaKnown RBP10.97□□□□□ -0.65
PRKCSH-202ENST00000585540 IFT46Q9NQC8 304 aa10.97□□□□□ -0.65
PRKCSH-202ENST00000585540 ANK2Q01484 3957 aa10.97□□□□□ -0.65
PRKCSH-202ENST00000585540 TUSC2O75896 110 aa10.96□□□□□ -0.65
PRKCSH-202ENST00000585540 HLA-DRB1P01911 266 aa10.96□□□□□ -0.65
PRKCSH-202ENST00000585540 OR8U9P0C7N5 309 aa10.96□□□□□ -0.65
PRKCSH-202ENST00000585540 CT45A6P0DMU7 189 aa10.96□□□□□ -0.65
PRKCSH-202ENST00000585540 CT45A5P0DMU8 189 aa10.96□□□□□ -0.65
PRKCSH-202ENST00000585540 CT45A7P0DMV0 189 aa10.96□□□□□ -0.65
PRKCSH-202ENST00000585540 SLC6A1P30531 599 aa10.96□□□□□ -0.65
PRKCSH-202ENST00000585540 ACTBP60709 375 aa10.96□□□□□ -0.65
PRKCSH-202ENST00000585540 MRPS10P82664 201 aaKnown RBP10.96□□□□□ -0.65
PRKCSH-202ENST00000585540 RPL39P5Q59GN2 51 aa10.96□□□□□ -0.65
PRKCSH-202ENST00000585540 RNASE12Q5GAN4 147 aaKnown RBP10.96□□□□□ -0.65
PRKCSH-202ENST00000585540 C9orf152Q5JTZ5 239 aa10.96□□□□□ -0.65
PRKCSH-202ENST00000585540 FAM131AQ6UXB0 335 aa10.96□□□□□ -0.65
PRKCSH-202ENST00000585540 CENPVQ7Z7K6 275 aaPredicted RBP10.96□□□□□ -0.65
PRKCSH-202ENST00000585540 ZBTB34Q8NCN2 500 aa10.96□□□□□ -0.65
PRKCSH-202ENST00000585540 OR5AP2Q8NGF4 316 aa10.96□□□□□ -0.65
PRKCSH-202ENST00000585540 OR8U1Q8NH10 309 aa10.96□□□□□ -0.65
PRKCSH-202ENST00000585540 SNAPC3Q92966 411 aa10.96□□□□□ -0.65
PRKCSH-202ENST00000585540 MMP27Q9H306 513 aa10.96□□□□□ -0.65
PRKCSH-202ENST00000585540 NDUFA13Q9P0J0 144 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms