RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ST8SIA5O15466 376 aa8.67□□□□□ -1.02
CCDC47-206ENST00000584112 SOCS1O15524 211 aa8.67□□□□□ -1.02
CCDC47-206ENST00000584112 RAMP3O60896 148 aa8.67□□□□□ -1.02
CCDC47-206ENST00000584112 RBBP9O75884 186 aa8.67□□□□□ -1.02
CCDC47-206ENST00000584112 NDUFA3O95167 84 aa8.67□□□□□ -1.02
CCDC47-206ENST00000584112 ZBTB25P24278 435 aa8.67□□□□□ -1.02
CCDC47-206ENST00000584112 CNTFRP26992 372 aa8.67□□□□□ -1.02
CCDC47-206ENST00000584112 MC5RP33032 325 aa8.67□□□□□ -1.02
CCDC47-206ENST00000584112 DGCR2P98153 550 aa8.67□□□□□ -1.02
CCDC47-206ENST00000584112 TBCEQ15813 527 aaPredicted RBP8.67□□□□□ -1.02
CCDC47-206ENST00000584112 DEFB136Q30KP8 78 aa8.67□□□□□ -1.02
CCDC47-206ENST00000584112 C9orf66Q5T8R8 295 aa8.67□□□□□ -1.02
CCDC47-206ENST00000584112 LIN54Q6MZP7 749 aa8.67□□□□□ -1.02
CCDC47-206ENST00000584112 FAM131AQ6UXB0 335 aa8.67□□□□□ -1.02
CCDC47-206ENST00000584112 UBE2E2Q96LR5 201 aa8.67□□□□□ -1.02
CCDC47-206ENST00000584112 DUX3Q96PT4 197 aa8.67□□□□□ -1.02
CCDC47-206ENST00000584112 GFI1Q99684 422 aa8.67□□□□□ -1.02
CCDC47-206ENST00000584112 PARP11Q9NR21 331 aa8.67□□□□□ -1.02
CCDC47-206ENST00000584112 DMBT1Q9UGM3 2413 aaPredicted RBP8.66□□□□□ -1.02
CCDC47-206ENST00000584112 IGHV7-81A0A0B4J1V7 117 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 TRAV41A0A0B4J266 112 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 FOXI3A8MTJ6 420 aaPredicted RBP8.66□□□□□ -1.02
CCDC47-206ENST00000584112 RRHO14718 337 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 PDCD5O14737 125 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 DENRO43583 198 aaKnown RBP8.66□□□□□ -1.02
CCDC47-206ENST00000584112 GSTP1P09211 210 aaKnown RBP8.66□□□□□ -1.02
CCDC47-206ENST00000584112 PPIFP30405 207 aaKnown RBP8.66□□□□□ -1.02
CCDC47-206ENST00000584112 CEACAM6P40199 344 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 VEGFCP49767 419 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 MRPS15P82914 257 aaKnown RBP8.66□□□□□ -1.02
CCDC47-206ENST00000584112 FABP5Q01469 135 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 PLGLAQ15195 96 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 RPL39P5Q59GN2 51 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 SBSPONQ8IVN8 264 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 TCTEX1D1Q8N7M0 179 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 MYOZ3Q8TDC0 251 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 FAM3DQ96BQ1 224 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 ARHGAP5-AS1Q96IT6 56 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 RITA1Q96K30 269 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 CMSS1Q9BQ75 279 aaKnown RBP8.66□□□□□ -1.02
CCDC47-206ENST00000584112 HDHD3Q9BSH5 251 aaPredicted RBP8.66□□□□□ -1.02
CCDC47-206ENST00000584112 PECRQ9BY49 303 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 Q9N2K0 584 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 VSIG4Q9Y279 399 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 WASHC3Q9Y3C0 194 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 WSB1Q9Y6I7 421 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 V9GY05 133 aa8.66□□□□□ -1.02
CCDC47-206ENST00000584112 G3V318 75 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 H0YJW9 148 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 H7C2Y5 167 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 IGLV1-40P01703 118 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 OR8U8P0C7N1 319 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 CT45A6P0DMU7 189 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 CT45A5P0DMU8 189 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 CT45A7P0DMV0 189 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 MAP2K4P45985 399 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 TMEM50BP56557 158 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 CLDN12P56749 244 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 RUNX1Q01196 453 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 FHL3Q13643 280 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 C2orf76Q3KRA6 126 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 LINC01559Q495D7 138 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 ZNF660Q6AZW8 331 aaPredicted RBP8.65□□□□□ -1.02
CCDC47-206ENST00000584112 IZUMO2Q6UXV1 221 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 ZNF367Q7RTV3 350 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 ZNF491Q8N8L2 437 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 OR11H1Q8NG94 326 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 PTX4Q96A99 478 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 ABHD14BQ96IU4 210 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 RNF5Q99942 180 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 AGMATQ9BSE5 352 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 C11orf54Q9H0W9 315 aaPredicted RBP8.65□□□□□ -1.02
CCDC47-206ENST00000584112 OR1A1Q9P1Q5 309 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 ZNF221Q9UK13 617 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 RAB22AQ9UL26 194 aa8.65□□□□□ -1.02
CCDC47-206ENST00000584112 TRAV1-2A0A0B4J238 106 aa8.64□□□□□ -1.03
CCDC47-206ENST00000584112 TMEM272A0A1B0GTI8 110 aa8.64□□□□□ -1.03
CCDC47-206ENST00000584112 SEC14L6B5MCN3 397 aa8.64□□□□□ -1.03
CCDC47-206ENST00000584112 SPDEFO95238 335 aa8.64□□□□□ -1.03
CCDC47-206ENST00000584112 APOA2P02652 100 aa8.64□□□□□ -1.03
CCDC47-206ENST00000584112 SCTP09683 121 aa8.64□□□□□ -1.03
CCDC47-206ENST00000584112 CD3GP09693 182 aa8.64□□□□□ -1.03
CCDC47-206ENST00000584112 GADD45AP24522 165 aa8.64□□□□□ -1.03
CCDC47-206ENST00000584112 MYL9P24844 172 aa8.64□□□□□ -1.03
CCDC47-206ENST00000584112 SERPINB10P48595 397 aa8.64□□□□□ -1.03
CCDC47-206ENST00000584112 CRIP2P52943 208 aaPredicted RBP8.64□□□□□ -1.03
CCDC47-206ENST00000584112 ZNF616Q08AN1 781 aa8.64□□□□□ -1.03
CCDC47-206ENST00000584112 TMEM267Q0VDI3 215 aaPredicted RBP8.64□□□□□ -1.03
CCDC47-206ENST00000584112 ECSCRQ19T08 205 aa8.64□□□□□ -1.03
CCDC47-206ENST00000584112 HES5Q5TA89 166 aa8.64□□□□□ -1.03
CCDC47-206ENST00000584112 GLDNQ6ZMI3 551 aaPredicted RBP8.64□□□□□ -1.03
CCDC47-206ENST00000584112 MINDY2Q8NBR6 621 aa8.64□□□□□ -1.03
CCDC47-206ENST00000584112 OR5AN1Q8NGI8 311 aa8.64□□□□□ -1.03
CCDC47-206ENST00000584112 OR4A4PQ8NGN8 299 aa8.64□□□□□ -1.03
CCDC47-206ENST00000584112 ABHD5Q8WTS1 349 aa8.64□□□□□ -1.03
CCDC47-206ENST00000584112 CNBD2Q96M20 576 aa8.64□□□□□ -1.03
CCDC47-206ENST00000584112 PRR25Q96S07 402 aa8.64□□□□□ -1.03
CCDC47-206ENST00000584112 TSNAXQ99598 290 aaKnown RBP8.64□□□□□ -1.03
CCDC47-206ENST00000584112 PARP12Q9H0J9 701 aaKnown RBP8.64□□□□□ -1.03
CCDC47-206ENST00000584112 FBXL15Q9H469 300 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms