RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 TCEAL6Q6IPX3 200 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 GLIPR1L1Q6UWM5 242 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 Q6ZSR6 202 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 SLC16A14Q7RTX9 510 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 C5orf24Q7Z6I8 188 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 LHFPL4Q7Z7J7 247 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 C17orf82Q86X59 251 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 GKN2Q86XP6 184 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 C9orf40Q8IXQ3 194 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 OR5AS1Q8N127 324 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 LRRC18Q8N456 261 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 FAM71E2Q8N5Q1 922 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF321PQ8N8H1 164 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 GATSQ8NAP1 163 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 OR8G5Q8NG78 346 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 OR9K2Q8NGE7 335 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 OR5H2Q8NGV7 314 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 OR13G1Q8NGZ3 307 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 TYMSOSQ8TAI1 123 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 SLC37A2Q8TED4 501 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 CASTOR1Q8WTX7 329 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 ST8SIA1Q92185 356 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 TCEAL3Q969E4 200 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 SLC25A36Q96CQ1 311 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 C10orf35Q96D05 121 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 CMBLQ96DG6 245 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 SLAMF6Q96DU3 332 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 RAB3CQ96E17 227 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 GALNT14Q96FL9 552 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 CLCC1Q96S66 551 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 KLHDC3Q9BQ90 382 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 RBM24Q9BX46 236 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 ANGPTL4Q9BY76 406 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 PBOV1Q9GZY1 135 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 PTGES2Q9H7Z7 377 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 METTL8Q9H825 291 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 NIT2Q9NQR4 276 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 C1orf123Q9NWV4 160 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 MIOXQ9UGB7 285 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 PILRBQ9UKJ0 227 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 WIPI2Q9Y4P8 454 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 SLCO1B1Q9Y6L6 691 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 SPTBN5Q9NRC6 3674 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 CPAMD8Q8IZJ3 1885 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 IGLV3-32A0A0A0MS00 114 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 BORCS7-ASMTA0A0B4J1R7 106 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 IGKV1D-43A0A0B4J1Z2 117 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 SERTM2A0A1B0GWG4 89 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 A0A1W2PNV4 684 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 CRYM-AS1A6NIL9 109 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 SERPINE3A8MV23 424 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 H3BSH0 61 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 K7EPK0 472 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 MLNRO43193 412 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 SGCEO43556 437 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF354AO60765 605 aaPredicted RBP3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 MED6O75586 246 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 IFNA21P01568 189 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 IFNA17P01571 189 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 SERPINA5P05154 406 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 CSN2P05814 226 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 FBP1P09467 338 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 OR8U8P0C7N1 319 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 LIPCP11150 499 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 IL12BP29460 328 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 OR3A2P47893 321 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 P2RY1P47900 373 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF133P52736 654 aaPredicted RBP3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF121P58317 390 aaPredicted RBP3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 PPP1CAP62136 330 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 LSM6P62312 80 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 RPL23AP62750 156 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 HIST1H3AP68431 136 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 SRYQ05066 204 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 FABP9Q0Z7S8 132 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 FZD2Q14332 565 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 EXT1Q16394 746 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 HIST3H3Q16695 136 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 SLC22A6Q4U2R8 563 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 HIST2H3PS2Q5TEC6 136 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 HEPN1Q6WQI6 88 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 ASCL4Q6XD76 172 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF600Q6ZNG1 722 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 TMPPEQ6ZT21 453 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 COX15Q7KZN9 410 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 SGPP2Q8IWX5 399 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 SLC22A18ASQ8N1D0 253 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 Q8N7P7 452 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 SUMF1Q8NBK3 374 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 TMEM104Q8NE00 496 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 LFNGQ8NES3 379 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 OR13D1Q8NGV5 346 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 NPRL2Q8WTW4 380 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 PATE1Q8WXA2 126 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 C11orf40Q8WZ69 217 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 FGF14Q92915 247 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 BADQ92934 168 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 NTNG2Q96CW9 530 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 ARHGAP5-AS1Q96IT6 56 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 AKR1E2Q96JD6 320 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms