RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 SNX10Q9Y5X0 201 aa1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 MED1Q15648 1581 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 REREQ9P2R6 1566 aa1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 TMEM94Q12767 1356 aa1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 AGLP35573 1532 aa1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 C3P01024 1663 aa1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 CLTCQ00610 1675 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 ADAMTSL1Q8N6G6 1762 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 KIDINS220Q9ULH0 1771 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 TCOF1Q13428 1488 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 CCDC141Q6ZP82 1450 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 MBD5Q9P267 1494 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 PTPRJQ12913 1337 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 LINC00862A6NCI5 91 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 METTL15A6NJ78 407 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 FTCDNL1E5RQL4 147 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 ORM1P02763 201 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 CFL1P23528 166 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 PSMB6P28072 239 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 CD151P48509 253 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 LINC00313P59037 77 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 KRTAP12-4P60329 112 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 ZNF117Q03924 483 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 SMAGPQ0VAQ4 97 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 CLEC12BQ2HXU8 276 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 TMEM176BQ3YBM2 270 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 MESTQ5EB52 335 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 CLEC6AQ6EIG7 209 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 OR11H1Q8NG94 326 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 OR52E4Q8NGH9 312 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 OR5L1Q8NGL2 311 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 OR4C16Q8NGL9 310 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 OR10A6Q8NH74 314 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 ABHD14BQ96IU4 210 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 RBP7Q96R05 134 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 UPK3BQ9BT76 320 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 UPF3BQ9BZI7 483 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 KDM5DQ9BY66 1539 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 FBN1P35555 2871 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 STRCQ7RTU9 1775 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 ALKQ9UM73 1620 aa1.95□□□□□ -2.1
SMCHD1-205ENST00000581383 SUPT6HQ7KZ85 1726 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 VWDEQ8N2E2 1590 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 DSCAML1Q8TD84 2053 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 NPATQ14207 1427 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 CNTLNQ9NXG0 1405 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 TRGV4A0A0C4DH28 118 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 CALUO43852 315 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 STK16O75716 305 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 HBZP02008 142 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 ESDP10768 282 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 CDK2P24941 298 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 BLVRBP30043 206 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 CRATP43155 626 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 CLDN12P56749 244 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 C4orf26Q17RF5 130 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 CCDC121Q6ZUS5 278 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 FUNDC1Q8IVP5 155 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 RIBC1Q8N443 379 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 OR51H1Q8NH63 302 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 ACY3Q96HD9 319 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 MGLLQ99685 303 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 C7orf50Q9BRJ6 194 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 C1QTNF6Q9BXI9 259 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 SMDT1Q9H4I9 107 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 C16orf95Q9H693 158 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 UBQLN4Q9NRR5 601 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 CCL26Q9Y258 94 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 ALG5Q9Y673 324 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 MINOS1-NBL1R4GNA1 71 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 ABCC3O15438 1527 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 MROH1Q8NDA8 1641 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 CDC42BPAQ5VT25 1732 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 A2ML1A8K2U0 1454 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 PZPP20742 1482 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 ERVK-7P63135 1459 aa1.94□□□□□ -2.1
SMCHD1-205ENST00000581383 UGGT1Q9NYU2 1555 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 ZNF142P52746 1687 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 VPS8Q8N3P4 1428 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 MIA2Q96PC5 1412 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 A0A0J9YX75 114 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 C19orf71A6NCJ1 209 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 ODF3BA8MYP8 253 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 GOLGA8RI6L899 631 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 TRAPPC3O43617 180 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 ZNF189O75820 626 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 P0DMU3 169 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 FAM231AP0DMU4 169 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 FAM231CP0DMU5 169 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 IGHV3-30-3P0DP02 117 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 SLC25A16P16260 332 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 ZNF7P17097 686 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 HSPA9P38646 679 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 LPAR6P43657 344 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 OR1E2P47887 323 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 RWDD2BP57060 319 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 DAD1P61803 113 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 SKP1P63208 163 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 TBC1D28Q2M2D7 210 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms