RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 AADACP22760 399 aa12.58□□□□□ -0.4
SS18-216ENST00000580751 NFYAP23511 347 aaPredicted RBP12.58□□□□□ -0.4
SS18-216ENST00000580751 S100GP29377 79 aa12.58□□□□□ -0.4
SS18-216ENST00000580751 CEACAM3P40198 252 aa12.58□□□□□ -0.4
SS18-216ENST00000580751 GNG10P50151 68 aa12.58□□□□□ -0.4
SS18-216ENST00000580751 RAB7AP51149 207 aa12.58□□□□□ -0.4
SS18-216ENST00000580751 LUMP51884 338 aaPredicted RBP12.58□□□□□ -0.4
SS18-216ENST00000580751 RIPPLY3P57055 190 aa12.58□□□□□ -0.4
SS18-216ENST00000580751 HLA-DRB5Q30154 266 aa12.58□□□□□ -0.4
SS18-216ENST00000580751 SIGLECL1Q8N7X8 197 aa12.58□□□□□ -0.4
SS18-216ENST00000580751 OR10V1Q8NGI7 309 aa12.58□□□□□ -0.4
SS18-216ENST00000580751 LEAP2Q969E1 77 aa12.58□□□□□ -0.4
SS18-216ENST00000580751 MALSU1Q96EH3 234 aa12.58□□□□□ -0.4
SS18-216ENST00000580751 ZNF48Q96MX3 618 aaPredicted RBP12.58□□□□□ -0.4
SS18-216ENST00000580751 RSRP1Q9BUV0 290 aa12.58□□□□□ -0.4
SS18-216ENST00000580751 GAB2Q9UQC2 676 aa12.58□□□□□ -0.4
SS18-216ENST00000580751 C14orf166Q9Y224 244 aaKnown RBP12.58□□□□□ -0.4
SS18-216ENST00000580751 SOX21Q9Y651 276 aaPredicted RBP12.58□□□□□ -0.4
SS18-216ENST00000580751 MDFIC2A0A1B0GVS7 189 aa12.57□□□□□ -0.4
SS18-216ENST00000580751 LEUTXA8MZ59 168 aa12.57□□□□□ -0.4
SS18-216ENST00000580751 ARPC1BO15143 372 aaKnown RBP12.57□□□□□ -0.4
SS18-216ENST00000580751 IGHV3-7P01780 117 aa12.57□□□□□ -0.4
SS18-216ENST00000580751 HILS1P60008 231 aa12.57□□□□□ -0.4
SS18-216ENST00000580751 RND3P61587 244 aa12.57□□□□□ -0.4
SS18-216ENST00000580751 MORN2Q502X0 79 aa12.57□□□□□ -0.4
SS18-216ENST00000580751 UTF1Q5T230 341 aa12.57□□□□□ -0.4
SS18-216ENST00000580751 LHFPL4Q7Z7J7 247 aa12.57□□□□□ -0.4
SS18-216ENST00000580751 SLC25A42Q86VD7 318 aa12.57□□□□□ -0.4
SS18-216ENST00000580751 LDLRAD3Q86YD5 345 aa12.57□□□□□ -0.4
SS18-216ENST00000580751 CMTM1Q8IZ96 169 aa12.57□□□□□ -0.4
SS18-216ENST00000580751 LINC00311Q8N616 119 aa12.57□□□□□ -0.4
SS18-216ENST00000580751 OR52L2PQ8NGH6 319 aa12.57□□□□□ -0.4
SS18-216ENST00000580751 OR10X1Q8NGY0 326 aa12.57□□□□□ -0.4
SS18-216ENST00000580751 MARCH1Q8TCQ1 289 aa12.57□□□□□ -0.4
SS18-216ENST00000580751 GPN1Q9HCN4 374 aaPredicted RBP12.57□□□□□ -0.4
SS18-216ENST00000580751 OR1A1Q9P1Q5 309 aa12.57□□□□□ -0.4
SS18-216ENST00000580751 DPM3Q9P2X0 92 aa12.57□□□□□ -0.4
SS18-216ENST00000580751 TRAV6A0A075B6T7 132 aa12.56□□□□□ -0.4
SS18-216ENST00000580751 PIGBOS1A0A0B4J2F0 54 aa12.56□□□□□ -0.4
SS18-216ENST00000580751 C7orf66A4D0T2 115 aa12.56□□□□□ -0.4
SS18-216ENST00000580751 SNRPGP15A8MWD9 76 aa12.56□□□□□ -0.4
SS18-216ENST00000580751 BUB1B-PAK6H3BSN5 160 aa12.56□□□□□ -0.4
SS18-216ENST00000580751 B3GALNT1O75752 331 aa12.56□□□□□ -0.4
SS18-216ENST00000580751 RLN1P04808 185 aa12.56□□□□□ -0.4
SS18-216ENST00000580751 PGAM2P15259 253 aa12.56□□□□□ -0.4
SS18-216ENST00000580751 PPP1CCP36873 323 aaKnown RBP12.56□□□□□ -0.4
SS18-216ENST00000580751 GNMTQ14749 295 aa12.56□□□□□ -0.4
SS18-216ENST00000580751 TMEM128Q5BJH2 165 aa12.56□□□□□ -0.4
SS18-216ENST00000580751 Q6YL49 198 aa12.56□□□□□ -0.4
SS18-216ENST00000580751 CCDC71LQ8N9Z2 235 aa12.56□□□□□ -0.4
SS18-216ENST00000580751 OR2AK2Q8NG84 335 aa12.56□□□□□ -0.4
SS18-216ENST00000580751 AJUBAQ96IF1 538 aa12.56□□□□□ -0.4
SS18-216ENST00000580751 FXYD6Q9H0Q3 95 aa12.56□□□□□ -0.4
SS18-216ENST00000580751 C5orf66Q9H5L9 145 aa12.56□□□□□ -0.4
SS18-216ENST00000580751 ZNRD1Q9P1U0 126 aa12.56□□□□□ -0.4
SS18-216ENST00000580751 VSIG4Q9Y279 399 aa12.56□□□□□ -0.4
SS18-216ENST00000580751 GPR31O00270 319 aa12.55□□□□□ -0.4
SS18-216ENST00000580751 IL3RAP26951 378 aa12.55□□□□□ -0.4
SS18-216ENST00000580751 ARHGDIBP52566 201 aa12.55□□□□□ -0.4
SS18-216ENST00000580751 DHODHQ02127 395 aa12.55□□□□□ -0.4
SS18-216ENST00000580751 BAMBIQ13145 260 aa12.55□□□□□ -0.4
SS18-216ENST00000580751 SSX2Q16385 188 aa12.55□□□□□ -0.4
SS18-216ENST00000580751 AANATQ16613 207 aa12.55□□□□□ -0.4
SS18-216ENST00000580751 TATDN3Q17R31 274 aa12.55□□□□□ -0.4
SS18-216ENST00000580751 SLC25A48Q6ZT89 311 aaKnown RBP12.55□□□□□ -0.4
SS18-216ENST00000580751 KCTD9Q7L273 389 aa12.55□□□□□ -0.4
SS18-216ENST00000580751 C5orf24Q7Z6I8 188 aa12.55□□□□□ -0.4
SS18-216ENST00000580751 TMEM86BQ8N661 226 aa12.55□□□□□ -0.4
SS18-216ENST00000580751 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.55□□□□□ -0.4
SS18-216ENST00000580751 ZNF439Q8NDP4 499 aa12.55□□□□□ -0.4
SS18-216ENST00000580751 BVESQ8NE79 360 aa12.55□□□□□ -0.4
SS18-216ENST00000580751 C17orf50Q8WW18 174 aa12.55□□□□□ -0.4
SS18-216ENST00000580751 SSMEM1Q8WWF3 244 aa12.55□□□□□ -0.4
SS18-216ENST00000580751 RTBDNQ9BSG5 229 aaPredicted RBP12.55□□□□□ -0.4
SS18-216ENST00000580751 ABHD14AQ9BUJ0 271 aa12.55□□□□□ -0.4
SS18-216ENST00000580751 SLC5A7Q9GZV3 580 aa12.55□□□□□ -0.4
SS18-216ENST00000580751 MEGF9Q9H1U4 602 aa12.55□□□□□ -0.4
SS18-216ENST00000580751 CUBNO60494 3623 aa12.54□□□□□ -0.4
SS18-216ENST00000580751 A0A1W2PPE3 182 aa12.54□□□□□ -0.4
SS18-216ENST00000580751 BTBD17A6NE02 478 aa12.54□□□□□ -0.4
SS18-216ENST00000580751 OOSP1A8MZH6 123 aa12.54□□□□□ -0.4
SS18-216ENST00000580751 GNRHRP30968 328 aa12.54□□□□□ -0.4
SS18-216ENST00000580751 FXYD4P59646 89 aa12.54□□□□□ -0.4
SS18-216ENST00000580751 ABCA11PQ4W5N1 156 aa12.54□□□□□ -0.4
SS18-216ENST00000580751 LDLRAD2Q5SZI1 272 aa12.54□□□□□ -0.4
SS18-216ENST00000580751 TPTE2P1Q5T6R2 138 aa12.54□□□□□ -0.4
SS18-216ENST00000580751 FAM53AQ6NSI3 398 aaPredicted RBP12.54□□□□□ -0.4
SS18-216ENST00000580751 CCDC144NLQ6NUI1 221 aa12.54□□□□□ -0.4
SS18-216ENST00000580751 GLDNQ6ZMI3 551 aaPredicted RBP12.54□□□□□ -0.4
SS18-216ENST00000580751 ZNF645Q8N7E2 425 aa12.54□□□□□ -0.4
SS18-216ENST00000580751 TOMM40LQ969M1 308 aa12.54□□□□□ -0.4
SS18-216ENST00000580751 RPEQ96AT9 228 aa12.54□□□□□ -0.4
SS18-216ENST00000580751 AGMATQ9BSE5 352 aa12.54□□□□□ -0.4
SS18-216ENST00000580751 PIPOXQ9P0Z9 390 aa12.54□□□□□ -0.4
SS18-216ENST00000580751 FLVCR2Q9UPI3 526 aa12.54□□□□□ -0.4
SS18-216ENST00000580751 RBM7Q9Y580 266 aaKnown RBP12.54□□□□□ -0.4
SS18-216ENST00000580751 HILPDAQ9Y5L2 63 aa12.54□□□□□ -0.4
SS18-216ENST00000580751 POMT1Q9Y6A1 747 aa12.54□□□□□ -0.4
SS18-216ENST00000580751 DNAJC9-AS1A6NH13 148 aa12.53□□□□□ -0.4
SS18-216ENST00000580751 VGLL3A8MV65 326 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms