RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 C8orf4Q9NR00 106 aa13.77□□□□□ -0.21
MKS1-209ENST00000580127 H0YJW9 148 aa13.76□□□□□ -0.21
MKS1-209ENST00000580127 H3BUA1 57 aa13.76□□□□□ -0.21
MKS1-209ENST00000580127 CNIH1O95406 144 aa13.76□□□□□ -0.21
MKS1-209ENST00000580127 IGLV1-51P01701 117 aa13.76□□□□□ -0.21
MKS1-209ENST00000580127 RPS27AP62979 156 aaKnown RBP13.76□□□□□ -0.21
MKS1-209ENST00000580127 NDPQ00604 133 aa13.76□□□□□ -0.21
MKS1-209ENST00000580127 RPL39P5Q59GN2 51 aa13.76□□□□□ -0.21
MKS1-209ENST00000580127 ZFAND6Q6FIF0 208 aa13.76□□□□□ -0.21
MKS1-209ENST00000580127 C6orf201Q7Z4U5 140 aa13.76□□□□□ -0.21
MKS1-209ENST00000580127 ZNF485Q8NCK3 441 aa13.76□□□□□ -0.21
MKS1-209ENST00000580127 IL17DQ8TAD2 202 aa13.76□□□□□ -0.21
MKS1-209ENST00000580127 TMEM68Q96MH6 324 aa13.76□□□□□ -0.21
MKS1-209ENST00000580127 SPATA25Q9BR10 227 aa13.76□□□□□ -0.21
MKS1-209ENST00000580127 TUBA4BQ9H853 241 aa13.76□□□□□ -0.21
MKS1-209ENST00000580127 SPDEFO95238 335 aa13.75□□□□□ -0.21
MKS1-209ENST00000580127 BPNT1O95861 308 aa13.75□□□□□ -0.21
MKS1-209ENST00000580127 APOA2P02652 100 aa13.75□□□□□ -0.21
MKS1-209ENST00000580127 ARSBP15848 533 aa13.75□□□□□ -0.21
MKS1-209ENST00000580127 RANBP1P43487 201 aa13.75□□□□□ -0.21
MKS1-209ENST00000580127 WNT4P56705 351 aa13.75□□□□□ -0.21
MKS1-209ENST00000580127 FXYD3Q14802 87 aa13.75□□□□□ -0.21
MKS1-209ENST00000580127 PSG5Q15238 335 aa13.75□□□□□ -0.21
MKS1-209ENST00000580127 GLDNQ6ZMI3 551 aaPredicted RBP13.75□□□□□ -0.21
MKS1-209ENST00000580127 C5orf24Q7Z6I8 188 aa13.75□□□□□ -0.21
MKS1-209ENST00000580127 GTSCR1Q86UQ5 136 aa13.75□□□□□ -0.21
MKS1-209ENST00000580127 SVOPQ8N4V2 548 aa13.75□□□□□ -0.21
MKS1-209ENST00000580127 DHRSXQ8N5I4 330 aa13.75□□□□□ -0.21
MKS1-209ENST00000580127 PHYHIPQ92561 330 aa13.75□□□□□ -0.21
MKS1-209ENST00000580127 ABHD14BQ96IU4 210 aa13.75□□□□□ -0.21
MKS1-209ENST00000580127 FAM103A1Q9BTL3 118 aaKnown RBP13.75□□□□□ -0.21
MKS1-209ENST00000580127 URM1Q9BTM9 101 aaKnown RBP13.75□□□□□ -0.21
MKS1-209ENST00000580127 C19orf73Q9NVV2 129 aa13.75□□□□□ -0.21
MKS1-209ENST00000580127 NAPSAO96009 420 aa13.74□□□□□ -0.21
MKS1-209ENST00000580127 AADACP22760 399 aa13.74□□□□□ -0.21
MKS1-209ENST00000580127 VEGFCP49767 419 aa13.74□□□□□ -0.21
MKS1-209ENST00000580127 ACSM3Q53FZ2 586 aa13.74□□□□□ -0.21
MKS1-209ENST00000580127 Q8N1Y9 231 aa13.74□□□□□ -0.21
MKS1-209ENST00000580127 POC5Q8NA72 575 aa13.74□□□□□ -0.21
MKS1-209ENST00000580127 C11orf54Q9H0W9 315 aaPredicted RBP13.74□□□□□ -0.21
MKS1-209ENST00000580127 ERICH4A6NGS2 130 aa13.73□□□□□ -0.21
MKS1-209ENST00000580127 CA2P00918 260 aa13.73□□□□□ -0.21
MKS1-209ENST00000580127 HTR2CP28335 458 aa13.73□□□□□ -0.21
MKS1-209ENST00000580127 LGALS7P47929 136 aa13.73□□□□□ -0.21
MKS1-209ENST00000580127 CBX3Q13185 183 aa13.73□□□□□ -0.21
MKS1-209ENST00000580127 C1orf100Q5SVJ3 147 aa13.73□□□□□ -0.21
MKS1-209ENST00000580127 ZNF880Q6PDB4 577 aa13.73□□□□□ -0.21
MKS1-209ENST00000580127 PDPNQ86YL7 162 aa13.73□□□□□ -0.21
MKS1-209ENST00000580127 GRPEL2Q8TAA5 225 aa13.73□□□□□ -0.21
MKS1-209ENST00000580127 AGMATQ9BSE5 352 aa13.73□□□□□ -0.21
MKS1-209ENST00000580127 TM2D1Q9BX74 207 aa13.73□□□□□ -0.21
MKS1-209ENST00000580127 GAB2Q9UQC2 676 aa13.73□□□□□ -0.21
MKS1-209ENST00000580127 TRBV6-6A0A0A6YYG2 114 aa13.72□□□□□ -0.21
MKS1-209ENST00000580127 ANKRD34BA5PLL1 514 aa13.72□□□□□ -0.21
MKS1-209ENST00000580127 SRMP19623 302 aa13.72□□□□□ -0.21
MKS1-209ENST00000580127 RBM48Q5RL73 367 aaKnown RBP13.72□□□□□ -0.21
MKS1-209ENST00000580127 OR10K2Q6IF99 312 aa13.72□□□□□ -0.21
MKS1-209ENST00000580127 LCN12Q6JVE5 192 aa13.72□□□□□ -0.21
MKS1-209ENST00000580127 PACRGLQ8N7B6 248 aa13.72□□□□□ -0.21
MKS1-209ENST00000580127 NANOGP1Q8N7R0 232 aa13.72□□□□□ -0.21
MKS1-209ENST00000580127 OR5T1Q8NG75 326 aa13.72□□□□□ -0.21
MKS1-209ENST00000580127 PTX4Q96A99 478 aa13.72□□□□□ -0.21
MKS1-209ENST00000580127 TNCP24821 2201 aa13.72□□□□□ -0.21
MKS1-209ENST00000580127 TAGLNQ01995 201 aaKnown RBP13.71□□□□□ -0.21
MKS1-209ENST00000580127 KLF5Q13887 457 aaPredicted RBP13.71□□□□□ -0.21
MKS1-209ENST00000580127 C8orf59Q8N0T1 100 aaPredicted RBP13.71□□□□□ -0.21
MKS1-209ENST00000580127 DRAXINQ8NBI3 349 aaPredicted RBP13.71□□□□□ -0.21
MKS1-209ENST00000580127 OR9G4Q8NGQ1 327 aa13.71□□□□□ -0.21
MKS1-209ENST00000580127 USMG5Q96IX5 58 aa13.71□□□□□ -0.21
MKS1-209ENST00000580127 TMED9Q9BVK6 235 aa13.71□□□□□ -0.21
MKS1-209ENST00000580127 EDA2RQ9HAV5 297 aa13.71□□□□□ -0.21
MKS1-209ENST00000580127 PSORS1C1Q9UIG5 152 aa13.71□□□□□ -0.21
MKS1-209ENST00000580127 JTBO76095 146 aa13.7□□□□□ -0.22
MKS1-209ENST00000580127 SERPINB10P48595 397 aa13.7□□□□□ -0.22
MKS1-209ENST00000580127 MRPS15P82914 257 aaKnown RBP13.7□□□□□ -0.22
MKS1-209ENST00000580127 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.7□□□□□ -0.22
MKS1-209ENST00000580127 OR6M1Q8NGM8 313 aa13.7□□□□□ -0.22
MKS1-209ENST00000580127 PLCXD1Q9NUJ7 323 aa13.7□□□□□ -0.22
MKS1-209ENST00000580127 PEF1Q9UBV8 284 aaKnown RBP13.7□□□□□ -0.22
MKS1-209ENST00000580127 HSF4Q9ULV5 492 aa13.7□□□□□ -0.22
MKS1-209ENST00000580127 SLC25A17O43808 307 aa13.69□□□□□ -0.22
MKS1-209ENST00000580127 BRI3O95415 125 aa13.69□□□□□ -0.22
MKS1-209ENST00000580127 IGKV1-16P04430 117 aa13.69□□□□□ -0.22
MKS1-209ENST00000580127 HLA-DRB3P79483 266 aa13.69□□□□□ -0.22
MKS1-209ENST00000580127 HAGHQ16775 308 aa13.69□□□□□ -0.22
MKS1-209ENST00000580127 HSD17B12Q53GQ0 312 aa13.69□□□□□ -0.22
MKS1-209ENST00000580127 AHSA2Q719I0 299 aa13.69□□□□□ -0.22
MKS1-209ENST00000580127 CEACAM19Q7Z692 300 aa13.69□□□□□ -0.22
MKS1-209ENST00000580127 HAPLN4Q86UW8 402 aa13.69□□□□□ -0.22
MKS1-209ENST00000580127 Q8N402 240 aa13.69□□□□□ -0.22
MKS1-209ENST00000580127 SNAPC3Q92966 411 aa13.69□□□□□ -0.22
MKS1-209ENST00000580127 C12orf4Q9NQ89 552 aa13.69□□□□□ -0.22
MKS1-209ENST00000580127 SLC35D1Q9NTN3 355 aa13.69□□□□□ -0.22
MKS1-209ENST00000580127 PEMTQ9UBM1 199 aa13.69□□□□□ -0.22
MKS1-209ENST00000580127 AK3Q9UIJ7 227 aa13.69□□□□□ -0.22
MKS1-209ENST00000580127 A0A0B4J203 849 aa13.68□□□□□ -0.22
MKS1-209ENST00000580127 TMEM14DPA8MWL7 114 aa13.68□□□□□ -0.22
MKS1-209ENST00000580127 SYNJ2BPP57105 145 aa13.68□□□□□ -0.22
MKS1-209ENST00000580127 RPEL1Q2QD12 228 aa13.68□□□□□ -0.22
MKS1-209ENST00000580127 LRRTM1Q86UE6 522 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms