RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 OR2C1O95371 312 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 HAND1O96004 215 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 IFNA10P01566 189 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 MT-ND4LP03901 98 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 SNRPCP09234 159 aaKnown RBP8.83□□□□□ -1
TOP3A-209ENST00000580095 DEFA4P12838 97 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 RPL30P62888 115 aaKnown RBP8.83□□□□□ -1
TOP3A-209ENST00000580095 ZNF880Q6PDB4 577 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 COMMD1Q8N668 190 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 CLEC18CQ8NCF0 446 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 PKIBQ9C010 78 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 TOLLIPQ9H0E2 274 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 OR2D2Q9H210 308 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 PTPRZ1P23471 2315 aaPredicted RBP8.83□□□□□ -1
TOP3A-209ENST00000580095 LRP5LA4QPB2 252 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 PAX1P15863 534 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 AGAP20933 346 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 SSTR5P35346 364 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 TAGLN2P37802 199 aaKnown RBP8.82□□□□□ -1
TOP3A-209ENST00000580095 HMGN3Q15651 99 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 TRIP6Q15654 476 aaKnown RBP8.82□□□□□ -1
TOP3A-209ENST00000580095 SRSF7Q16629 238 aaKnown RBP eCLIP8.82□□□□□ -1
TOP3A-209ENST00000580095 NCMAPQ5T1S8 102 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 C5orf30Q96GV9 206 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 CABLES2Q9BTV7 478 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 EGLN1Q9GZT9 426 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 WSB1Q9Y6I7 421 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 HEATR1Q9H583 2144 aaKnown RBP8.82□□□□□ -1
TOP3A-209ENST00000580095 A0A1B0GU03 582 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 C12orf77C9JDV5 145 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 SH2D1BO14796 132 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 IFNA5P01569 189 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 SRP19P09132 144 aaKnown RBP8.82□□□□□ -1
TOP3A-209ENST00000580095 PGA5P0DJD9 388 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 HIST1H1BP16401 226 aaKnown RBP8.82□□□□□ -1
TOP3A-209ENST00000580095 PAX6P26367 422 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 GABRA2P47869 451 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 TAS2R30P59541 319 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 UBE2KP61086 200 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 ERVK11-1P61568 191 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 RAB11AP62491 216 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 EDDM3AQ14507 147 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 ZNF429Q86V71 674 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 FGFRL1Q8N441 504 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 ABHD14BQ96IU4 210 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 PRO1933Q9H354 126 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 ZDHHC11Q9H8X9 412 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 TMEM9BQ9NQ34 198 aa8.82□□□□□ -1
TOP3A-209ENST00000580095 UBE2L5PA0A1B0GUS4 154 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 IFITM10A6NMD0 228 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 SCAF4O95104 1147 aaKnown RBP8.81□□□□□ -1
TOP3A-209ENST00000580095 CLDN1O95832 211 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 RPS10P46783 165 aaKnown RBP8.81□□□□□ -1
TOP3A-209ENST00000580095 GLIPR1P48060 266 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 DLK1P80370 383 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 USF2Q15853 346 aaPredicted RBP8.81□□□□□ -1
TOP3A-209ENST00000580095 ZNF726P1Q15940 193 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 C9orf106Q8NAJ2 232 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 DEFB124Q8NES8 71 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 GNPNAT1Q96EK6 184 aaPredicted RBP8.81□□□□□ -1
TOP3A-209ENST00000580095 CLN8Q9UBY8 286 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 TRBV6-6A0A0A6YYG2 114 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.81□□□□□ -1
TOP3A-209ENST00000580095 EREGO14944 169 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 PTBP3O95758 552 aaKnown RBP8.81□□□□□ -1
TOP3A-209ENST00000580095 NPSP0C0P6 89 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 MRPS11P82912 194 aaKnown RBP8.81□□□□□ -1
TOP3A-209ENST00000580095 TGFBR3Q03167 851 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 BAXQ07812 192 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 MRPL49Q13405 166 aaKnown RBP8.81□□□□□ -1
TOP3A-209ENST00000580095 GABRA6Q16445 453 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 FAM214BQ7L5A3 538 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 TMEM178AQ8NBL3 297 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 LFNGQ8NES3 379 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 CLDND2Q8NHS1 167 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 ZDHHC16Q969W1 377 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 GMPPAQ96IJ6 420 aaPredicted RBP8.81□□□□□ -1
TOP3A-209ENST00000580095 OR4C12Q96R67 309 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 FAM234AQ9H0X4 552 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 POLDIP2Q9Y2S7 368 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 ANKRD11Q6UB99 2663 aaPredicted RBP8.81□□□□□ -1
TOP3A-209ENST00000580095 PLCE1Q9P212 2302 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 OR5H1A6NKK0 313 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 TIMM8AO60220 97 aaPredicted RBP8.81□□□□□ -1
TOP3A-209ENST00000580095 SOX15O60248 233 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 RBMXL2O75526 392 aaKnown RBP8.81□□□□□ -1
TOP3A-209ENST00000580095 IL2RGP31785 369 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 LINC00596Q86U02 117 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 SCGB1C1Q8TD33 95 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 KIAA1456Q9P272 454 aa8.81□□□□□ -1
TOP3A-209ENST00000580095 CHD3Q12873 2000 aaKnown RBP8.8□□□□□ -1
TOP3A-209ENST00000580095 ZNF292O60281 2723 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 A6NJY4 79 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 C17orf98A8MV24 154 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 S1PR2O95136 353 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 HBZP02008 142 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 ZNF25P17030 456 aaPredicted RBP8.8□□□□□ -1
TOP3A-209ENST00000580095 GAMTQ14353 236 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 C11orf53Q8IXP5 236 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 ZNF525Q8N782 197 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms