RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 PMS2P11Q13670 270 aa13.03□□□□□ -0.32
ITGB4-206ENST00000579662 EIF4E3Q8N5X7 224 aaKnown RBP13.03□□□□□ -0.32
ITGB4-206ENST00000579662 LSM10Q969L4 123 aaKnown RBP13.03□□□□□ -0.32
ITGB4-206ENST00000579662 AP4M1O00189 453 aa13.03□□□□□ -0.32
ITGB4-206ENST00000579662 SLC35B1P78383 322 aa13.03□□□□□ -0.32
ITGB4-206ENST00000579662 RHOVQ96L33 236 aa13.03□□□□□ -0.32
ITGB4-206ENST00000579662 SLC35E4Q6ICL7 350 aa13.03□□□□□ -0.32
ITGB4-206ENST00000579662 OR9G1Q8NH87 305 aa13.03□□□□□ -0.32
ITGB4-206ENST00000579662 TMEM186Q96B77 213 aa13.03□□□□□ -0.32
ITGB4-206ENST00000579662 ISLRO14498 428 aa13.02□□□□□ -0.32
ITGB4-206ENST00000579662 CXCL2P19875 107 aa13.02□□□□□ -0.32
ITGB4-206ENST00000579662 CEBPDP49716 269 aaPredicted RBP13.02□□□□□ -0.32
ITGB4-206ENST00000579662 HILPDAQ9Y5L2 63 aa13.02□□□□□ -0.32
ITGB4-206ENST00000579662 TRPM7Q96QT4 1865 aa13.02□□□□□ -0.32
ITGB4-206ENST00000579662 PPIAL4CA0A0B4J2A2 164 aa13.02□□□□□ -0.32
ITGB4-206ENST00000579662 J3QR89 54 aa13.02□□□□□ -0.32
ITGB4-206ENST00000579662 PPIAL4GP0DN37 164 aa13.02□□□□□ -0.32
ITGB4-206ENST00000579662 HLA-DRB5Q30154 266 aa13.02□□□□□ -0.32
ITGB4-206ENST00000579662 OR10C1Q96KK4 312 aa13.02□□□□□ -0.32
ITGB4-206ENST00000579662 TRBV23-1A0A0A0MS06 115 aa13.02□□□□□ -0.33
ITGB4-206ENST00000579662 FGFRL1Q8N441 504 aa13.02□□□□□ -0.33
ITGB4-206ENST00000579662 LRRC75AQ8NAA5 344 aa13.02□□□□□ -0.33
ITGB4-206ENST00000579662 PTPRZ1P23471 2315 aaPredicted RBP13.02□□□□□ -0.33
ITGB4-206ENST00000579662 LOC102723996A0A087X1L8 192 aa13.02□□□□□ -0.33
ITGB4-206ENST00000579662 IGHV1-69-2A0A0G2JMI3 117 aa13.02□□□□□ -0.33
ITGB4-206ENST00000579662 MFSD2BA6NFX1 497 aa13.02□□□□□ -0.33
ITGB4-206ENST00000579662 FAM87AP0C7U9 286 aa13.02□□□□□ -0.33
ITGB4-206ENST00000579662 RCC1P18754 421 aaPredicted RBP13.02□□□□□ -0.33
ITGB4-206ENST00000579662 OR10J1P30954 320 aa13.02□□□□□ -0.33
ITGB4-206ENST00000579662 GLRXP35754 106 aa13.02□□□□□ -0.33
ITGB4-206ENST00000579662 GPR146Q96CH1 333 aa13.02□□□□□ -0.33
ITGB4-206ENST00000579662 APELAP0DMC3 54 aa13.02□□□□□ -0.33
ITGB4-206ENST00000579662 PCSK4Q6UW60 755 aa13.02□□□□□ -0.33
ITGB4-206ENST00000579662 AQP10Q96PS8 301 aa13.02□□□□□ -0.33
ITGB4-206ENST00000579662 LCTP09848 1927 aa13.01□□□□□ -0.33
ITGB4-206ENST00000579662 ZIC3O60481 467 aa13.01□□□□□ -0.33
ITGB4-206ENST00000579662 GBGT1Q8N5D6 347 aa13.01□□□□□ -0.33
ITGB4-206ENST00000579662 OR4A5Q8NH83 315 aa13.01□□□□□ -0.33
ITGB4-206ENST00000579662 TMEM140Q9NV12 185 aa13.01□□□□□ -0.33
ITGB4-206ENST00000579662 MUC1P15941 1255 aaPredicted RBP13.01□□□□□ -0.33
ITGB4-206ENST00000579662 LOXL3P58215 753 aa13.01□□□□□ -0.33
ITGB4-206ENST00000579662 Q1RN00 199 aa13.01□□□□□ -0.33
ITGB4-206ENST00000579662 WNT5AP41221 380 aa13.01□□□□□ -0.33
ITGB4-206ENST00000579662 TCL1AP56279 114 aa13.01□□□□□ -0.33
ITGB4-206ENST00000579662 HSPE1P61604 102 aaKnown RBP13.01□□□□□ -0.33
ITGB4-206ENST00000579662 OVCH2Q7RTZ1 564 aa13.01□□□□□ -0.33
ITGB4-206ENST00000579662 RABAC1Q9UI14 185 aa13.01□□□□□ -0.33
ITGB4-206ENST00000579662 hCG_38984A0A1B0GV85 526 aa13.01□□□□□ -0.33
ITGB4-206ENST00000579662 A0A1W2PS18 150 aa13.01□□□□□ -0.33
ITGB4-206ENST00000579662 M0R2Z0 102 aa13.01□□□□□ -0.33
ITGB4-206ENST00000579662 TCAPO15273 167 aa13.01□□□□□ -0.33
ITGB4-206ENST00000579662 ZNF430Q9H8G1 570 aaPredicted RBP13.01□□□□□ -0.33
ITGB4-206ENST00000579662 HKR1P10072 659 aa13□□□□□ -0.33
ITGB4-206ENST00000579662 HIST1H1BP16401 226 aaKnown RBP13□□□□□ -0.33
ITGB4-206ENST00000579662 PDLIM4P50479 330 aa13□□□□□ -0.33
ITGB4-206ENST00000579662 FLVCR1-AS1Q8TAF5 88 aa13□□□□□ -0.33
ITGB4-206ENST00000579662 TRAV30A0A087WSZ9 112 aa13□□□□□ -0.33
ITGB4-206ENST00000579662 ATXN7O15265 892 aaPredicted RBP13□□□□□ -0.33
ITGB4-206ENST00000579662 ZNF253O75346 499 aa13□□□□□ -0.33
ITGB4-206ENST00000579662 ZNF273Q14593 569 aa13□□□□□ -0.33
ITGB4-206ENST00000579662 C5orf66Q9H5L9 145 aa13□□□□□ -0.33
ITGB4-206ENST00000579662 ZNHIT1O43257 154 aa13□□□□□ -0.33
ITGB4-206ENST00000579662 OR2A4O95047 310 aa13□□□□□ -0.33
ITGB4-206ENST00000579662 CFDP00746 253 aaPredicted RBP13□□□□□ -0.33
ITGB4-206ENST00000579662 APOBEC3AP31941 199 aaPredicted RBP13□□□□□ -0.33
ITGB4-206ENST00000579662 ATP5IP56385 69 aaPredicted RBP13□□□□□ -0.33
ITGB4-206ENST00000579662 LRRC75BQ2VPJ9 315 aa13□□□□□ -0.33
ITGB4-206ENST00000579662 OR2A7Q96R45 310 aa13□□□□□ -0.33
ITGB4-206ENST00000579662 PITPNC1Q9UKF7 332 aa13□□□□□ -0.33
ITGB4-206ENST00000579662 ANKRD36A6QL64 1941 aa13□□□□□ -0.33
ITGB4-206ENST00000579662 VAMP3Q15836 100 aa13□□□□□ -0.33
ITGB4-206ENST00000579662 ABHD12Q8N2K0 398 aa13□□□□□ -0.33
ITGB4-206ENST00000579662 TMEM105Q8N8V8 129 aa13□□□□□ -0.33
ITGB4-206ENST00000579662 ZCCHC14Q8WYQ9 949 aaKnown RBP13□□□□□ -0.33
ITGB4-206ENST00000579662 LOC105371242A0A075B767 164 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 C17orf51A8MQB3 221 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 LIPFP07098 398 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 UMODP07911 640 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 FAM57AQ8TBR7 257 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 CHAC2Q8WUX2 184 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 TM2D1Q9BX74 207 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 CLEC7AQ9BXN2 247 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 SRD5A3Q9H8P0 318 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 TNFSF10P50591 281 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 CRYBA2P53672 197 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 ELOBQ15370 118 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 LDLRAD3Q86YD5 345 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 TMEM116Q8NCL8 245 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 TMEM191AQ9H0A3 160 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 GSX1Q9H4S2 264 aaPredicted RBP12.99□□□□□ -0.33
ITGB4-206ENST00000579662 RALYQ9UKM9 306 aaKnown RBP12.99□□□□□ -0.33
ITGB4-206ENST00000579662 MARCH11A6NNE9 402 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 CELA3AP09093 270 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 ZNF735P0CB33 412 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 CSRP1P21291 193 aaKnown RBP12.99□□□□□ -0.33
ITGB4-206ENST00000579662 RPS11P62280 158 aaKnown RBP eCLIP12.99□□□□□ -0.33
ITGB4-206ENST00000579662 TNFRSF9Q07011 255 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 IZUMO4Q1ZYL8 232 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 MUC15Q8N387 334 aa12.99□□□□□ -0.33
ITGB4-206ENST00000579662 STPG3Q8N7X2 389 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms