RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 ZFP41Q8N8Y5 198 aa6.52□□□□□ -1.37
CASC3-206ENST00000579238 POC5Q8NA72 575 aa6.52□□□□□ -1.37
CASC3-206ENST00000579238 FAM46BQ96A09 425 aa6.52□□□□□ -1.37
CASC3-206ENST00000579238 ABHD14BQ96IU4 210 aa6.52□□□□□ -1.37
CASC3-206ENST00000579238 DERL3Q96Q80 235 aa6.52□□□□□ -1.37
CASC3-206ENST00000579238 SLC29A1Q99808 456 aa6.52□□□□□ -1.37
CASC3-206ENST00000579238 SULT4A1Q9BR01 284 aa6.52□□□□□ -1.37
CASC3-206ENST00000579238 C9orf16Q9BUW7 83 aa6.52□□□□□ -1.37
CASC3-206ENST00000579238 TMED9Q9BVK6 235 aa6.52□□□□□ -1.37
CASC3-206ENST00000579238 ZNF355PQ9NSJ1 428 aa6.52□□□□□ -1.37
CASC3-206ENST00000579238 SIGLEC8Q9NYZ4 499 aa6.52□□□□□ -1.37
CASC3-206ENST00000579238 CLEC2DQ9UHP7 191 aa6.52□□□□□ -1.37
CASC3-206ENST00000579238 DIMT1Q9UNQ2 313 aaKnown RBP6.52□□□□□ -1.37
CASC3-206ENST00000579238 ANKRD34BA5PLL1 514 aa6.51□□□□□ -1.37
CASC3-206ENST00000579238 BRI3O95415 125 aa6.51□□□□□ -1.37
CASC3-206ENST00000579238 NAPSAO96009 420 aa6.51□□□□□ -1.37
CASC3-206ENST00000579238 UBBP0CG47 229 aa6.51□□□□□ -1.37
CASC3-206ENST00000579238 CPEP16870 476 aa6.51□□□□□ -1.37
CASC3-206ENST00000579238 SYNJ2BPP57105 145 aa6.51□□□□□ -1.37
CASC3-206ENST00000579238 TAS2R43P59537 309 aa6.51□□□□□ -1.37
CASC3-206ENST00000579238 FXYD3Q14802 87 aa6.51□□□□□ -1.37
CASC3-206ENST00000579238 TATDN3Q17R31 274 aa6.51□□□□□ -1.37
CASC3-206ENST00000579238 MOB1BQ7L9L4 216 aa6.51□□□□□ -1.37
CASC3-206ENST00000579238 SVOPQ8N4V2 548 aa6.51□□□□□ -1.37
CASC3-206ENST00000579238 ZNF485Q8NCK3 441 aa6.51□□□□□ -1.37
CASC3-206ENST00000579238 OR5T1Q8NG75 326 aa6.51□□□□□ -1.37
CASC3-206ENST00000579238 GRPEL2Q8TAA5 225 aa6.51□□□□□ -1.37
CASC3-206ENST00000579238 EDARADDQ8WWZ3 215 aa6.51□□□□□ -1.37
CASC3-206ENST00000579238 AGMATQ9BSE5 352 aa6.51□□□□□ -1.37
CASC3-206ENST00000579238 FAAP24Q9BTP7 215 aa6.51□□□□□ -1.37
CASC3-206ENST00000579238 PARP12Q9H0J9 701 aaKnown RBP6.51□□□□□ -1.37
CASC3-206ENST00000579238 HIPK2Q9H2X6 1198 aa6.51□□□□□ -1.37
CASC3-206ENST00000579238 PNMA8CA0A1B0GUJ8 204 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 SHISA3A0PJX4 238 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 SLC25A17O43808 307 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 IGKV1-16P04430 117 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 CSN3P07498 182 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 SNRPBP14678 240 aaKnown RBP6.5□□□□□ -1.37
CASC3-206ENST00000579238 AADACP22760 399 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 RPS16P62249 146 aaKnown RBP6.5□□□□□ -1.37
CASC3-206ENST00000579238 ZNF343Q6P1L6 599 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 LINC00322Q6ZN03 302 aaPredicted RBP6.5□□□□□ -1.37
CASC3-206ENST00000579238 C6orf201Q7Z4U5 140 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 PDPNQ86YL7 162 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 ZNF383Q8NA42 475 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 ZNF555Q8NEP9 628 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 OR2K2Q8NGT1 345 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 SETD6Q8TBK2 473 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 THRSPQ92748 146 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 TMEM80Q96HE8 168 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 TMEM68Q96MH6 324 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 TM2D1Q9BX74 207 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 TMEM59Q9BXS4 323 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 C11orf54Q9H0W9 315 aaPredicted RBP6.5□□□□□ -1.37
CASC3-206ENST00000579238 CHMP1AQ9HD42 196 aaPredicted RBP6.5□□□□□ -1.37
CASC3-206ENST00000579238 RETNQ9HD89 108 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 PEF1Q9UBV8 284 aaKnown RBP6.5□□□□□ -1.37
CASC3-206ENST00000579238 CEPT1Q9Y6K0 416 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 ALMS1Q8TCU4 4167 aa6.5□□□□□ -1.37
CASC3-206ENST00000579238 TRBV6-6A0A0A6YYG2 114 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 IZUMO1RA6ND01 250 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 DYNC1I1O14576 645 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 PROP1O75360 226 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 TPPPO94811 219 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 OR2A4O95047 310 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 CNIH1O95406 144 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 APOA2P02652 100 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 CD1AP06126 327 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 ZBTB25P24278 435 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 MAPK3P27361 379 aaPredicted RBP6.49□□□□□ -1.37
CASC3-206ENST00000579238 HTR2CP28335 458 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 CEACAM6P40199 344 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 MECP2P51608 486 aaKnown RBP6.49□□□□□ -1.37
CASC3-206ENST00000579238 RPS27AP62979 156 aaKnown RBP6.49□□□□□ -1.37
CASC3-206ENST00000579238 HLA-DRB3P79483 266 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 SSBP2P81877 361 aaPredicted RBP6.49□□□□□ -1.37
CASC3-206ENST00000579238 RPEL1Q2QD12 228 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 OR10K2Q6IF99 312 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 LAX1Q8IWV1 398 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 C10orf67Q8IYJ2 551 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 DRAXINQ8NBI3 349 aaPredicted RBP6.49□□□□□ -1.37
CASC3-206ENST00000579238 PTX4Q96A99 478 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 USMG5Q96IX5 58 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 FAM110AQ9BQ89 295 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 TINAGL1Q9GZM7 467 aaPredicted RBP6.49□□□□□ -1.37
CASC3-206ENST00000579238 RIMS4Q9H426 269 aaPredicted RBP6.49□□□□□ -1.37
CASC3-206ENST00000579238 PLEKHJ1Q9NW61 149 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 OR1A1Q9P1Q5 309 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 PEMTQ9UBM1 199 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 ZNF221Q9UK13 617 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 ADAM30Q9UKF2 790 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 MGAT4AQ9UM21 535 aa6.49□□□□□ -1.37
CASC3-206ENST00000579238 PLECQ15149 4684 aaKnown RBP6.49□□□□□ -1.37
CASC3-206ENST00000579238 AIREO43918 545 aa6.48□□□□□ -1.37
CASC3-206ENST00000579238 TRBV12-3P01733 135 aa6.48□□□□□ -1.37
CASC3-206ENST00000579238 CRYGBP07316 175 aa6.48□□□□□ -1.37
CASC3-206ENST00000579238 CELP19835 753 aa6.48□□□□□ -1.37
CASC3-206ENST00000579238 LGALS7P47929 136 aa6.48□□□□□ -1.37
CASC3-206ENST00000579238 LINC00205P59089 165 aa6.48□□□□□ -1.37
CASC3-206ENST00000579238 CD81P60033 236 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms