RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 GSTP1P09211 210 aaKnown RBP11.67□□□□□ -0.54
SS18-212ENST00000579061 GSTT2P0CG29 244 aa11.67□□□□□ -0.54
SS18-212ENST00000579061 GSTT2BP0CG30 244 aa11.67□□□□□ -0.54
SS18-212ENST00000579061 OR5H8P0DN80 308 aa11.67□□□□□ -0.54
SS18-212ENST00000579061 CD33P20138 364 aa11.67□□□□□ -0.54
SS18-212ENST00000579061 TALDO1P37837 337 aa11.67□□□□□ -0.54
SS18-212ENST00000579061 PITPNAQ00169 270 aa11.67□□□□□ -0.54
SS18-212ENST00000579061 FOXE3Q13461 319 aa11.67□□□□□ -0.54
SS18-212ENST00000579061 C5orf64Q2M2E5 130 aa11.67□□□□□ -0.54
SS18-212ENST00000579061 CDNFQ49AH0 187 aa11.67□□□□□ -0.54
SS18-212ENST00000579061 FAM131AQ6UXB0 335 aa11.67□□□□□ -0.54
SS18-212ENST00000579061 C1QL4Q86Z23 238 aa11.67□□□□□ -0.54
SS18-212ENST00000579061 RNF152Q8N8N0 203 aa11.67□□□□□ -0.54
SS18-212ENST00000579061 OR10J5Q8NHC4 309 aa11.67□□□□□ -0.54
SS18-212ENST00000579061 RITA1Q96K30 269 aa11.67□□□□□ -0.54
SS18-212ENST00000579061 WASHC3Q9Y3C0 194 aa11.67□□□□□ -0.54
SS18-212ENST00000579061 ETV7Q9Y603 341 aa11.67□□□□□ -0.54
SS18-212ENST00000579061 BET1O15155 118 aa11.66□□□□□ -0.54
SS18-212ENST00000579061 SNRPBP14678 240 aaKnown RBP11.66□□□□□ -0.54
SS18-212ENST00000579061 VDAC1P21796 283 aa11.66□□□□□ -0.54
SS18-212ENST00000579061 CNTFRP26992 372 aa11.66□□□□□ -0.54
SS18-212ENST00000579061 CFHR3Q02985 330 aa11.66□□□□□ -0.54
SS18-212ENST00000579061 MXD1Q05195 221 aa11.66□□□□□ -0.54
SS18-212ENST00000579061 IGSF11Q5DX21 431 aa11.66□□□□□ -0.54
SS18-212ENST00000579061 CXorf66Q5JRM2 361 aaPredicted RBP11.66□□□□□ -0.54
SS18-212ENST00000579061 HACD4Q5VWC8 232 aa11.66□□□□□ -0.54
SS18-212ENST00000579061 LIN54Q6MZP7 749 aa11.66□□□□□ -0.54
SS18-212ENST00000579061 TSPAN14Q8NG11 270 aa11.66□□□□□ -0.54
SS18-212ENST00000579061 LGALS14Q8TCE9 139 aa11.66□□□□□ -0.54
SS18-212ENST00000579061 RBMXL1Q96E39 390 aaKnown RBP11.66□□□□□ -0.54
SS18-212ENST00000579061 DCSTAMPQ9H295 470 aa11.66□□□□□ -0.54
SS18-212ENST00000579061 OR51J1Q9H342 316 aa11.66□□□□□ -0.54
SS18-212ENST00000579061 RNF167Q9H6Y7 350 aa11.66□□□□□ -0.54
SS18-212ENST00000579061 RHBDL2Q9NX52 303 aa11.66□□□□□ -0.54
SS18-212ENST00000579061 ZNF230Q9UIE0 474 aaPredicted RBP11.66□□□□□ -0.54
SS18-212ENST00000579061 RNF150Q9ULK6 438 aa11.66□□□□□ -0.54
SS18-212ENST00000579061 RRHO14718 337 aa11.65□□□□□ -0.54
SS18-212ENST00000579061 IGHG4P01861 327 aa11.65□□□□□ -0.54
SS18-212ENST00000579061 TFAP2AP05549 437 aa11.65□□□□□ -0.54
SS18-212ENST00000579061 CLEC2LP0C7M8 214 aa11.65□□□□□ -0.54
SS18-212ENST00000579061 ZNF260Q3ZCT1 412 aa11.65□□□□□ -0.54
SS18-212ENST00000579061 GLDNQ6ZMI3 551 aaPredicted RBP11.65□□□□□ -0.54
SS18-212ENST00000579061 CROCCP3Q8IVE0 287 aa11.65□□□□□ -0.54
SS18-212ENST00000579061 MAFIPQ8WZ33 124 aa11.65□□□□□ -0.54
SS18-212ENST00000579061 PRKDCP78527 4128 aaKnown RBP11.64□□□□□ -0.55
SS18-212ENST00000579061 A0A0A6YYH2 397 aa11.64□□□□□ -0.55
SS18-212ENST00000579061 IGHV7-81A0A0B4J1V7 117 aa11.64□□□□□ -0.55
SS18-212ENST00000579061 A6NJ64 397 aa11.64□□□□□ -0.55
SS18-212ENST00000579061 TRIM64CA6NLI5 447 aa11.64□□□□□ -0.55
SS18-212ENST00000579061 H7C2Y5 167 aa11.64□□□□□ -0.55
SS18-212ENST00000579061 SPDEFO95238 335 aa11.64□□□□□ -0.55
SS18-212ENST00000579061 DUS4LO95620 317 aaKnown RBP11.64□□□□□ -0.55
SS18-212ENST00000579061 APOA2P02652 100 aa11.64□□□□□ -0.55
SS18-212ENST00000579061 CTXN2P0C2S0 81 aa11.64□□□□□ -0.55
SS18-212ENST00000579061 CDX1P47902 265 aaPredicted RBP11.64□□□□□ -0.55
SS18-212ENST00000579061 THBS3P49746 956 aa11.64□□□□□ -0.55
SS18-212ENST00000579061 TAGLNQ01995 201 aaKnown RBP11.64□□□□□ -0.55
SS18-212ENST00000579061 OXLD1Q5BKU9 147 aa11.64□□□□□ -0.55
SS18-212ENST00000579061 ZNF660Q6AZW8 331 aaPredicted RBP11.64□□□□□ -0.55
SS18-212ENST00000579061 PDPNQ86YL7 162 aa11.64□□□□□ -0.55
SS18-212ENST00000579061 ZNF695Q8IW36 515 aa11.64□□□□□ -0.55
SS18-212ENST00000579061 ZNF383Q8NA42 475 aa11.64□□□□□ -0.55
SS18-212ENST00000579061 YIPF6Q96EC8 236 aa11.64□□□□□ -0.55
SS18-212ENST00000579061 RCC1LQ96I51 464 aaKnown RBP11.64□□□□□ -0.55
SS18-212ENST00000579061 TSNAXQ99598 290 aaKnown RBP11.64□□□□□ -0.55
SS18-212ENST00000579061 GINS4Q9BRT9 223 aa11.64□□□□□ -0.55
SS18-212ENST00000579061 DNAH3Q8TD57 4116 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 IGKV1D-8A0A087WSZ0 117 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 TMEM235A6NFC5 223 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 NUDT19A8MXV4 375 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 ATP6V0E1O15342 81 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 AIREO43918 545 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 OR8U9P0C7N5 309 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 PPIFP30405 207 aaKnown RBP11.63□□□□□ -0.55
SS18-212ENST00000579061 MYCNOSP40205 109 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 CRIP2P52943 208 aaPredicted RBP11.63□□□□□ -0.55
SS18-212ENST00000579061 IDNKQ5T6J7 187 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 ETV3LQ6ZN32 361 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 REC114Q7Z4M0 266 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 H1FOOQ8IZA3 346 aaPredicted RBP11.63□□□□□ -0.55
SS18-212ENST00000579061 LINC00482Q8N8I6 264 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 KLHL30-AS1Q8NEE0 82 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 OR5H6Q8NGV6 325 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 OR8U1Q8NH10 309 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 SLC25A38Q96DW6 304 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 OR2D2Q9H210 308 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 FBXL15Q9H469 300 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 SDHAF2Q9NX18 166 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 ELF5Q9UKW6 265 aaPredicted RBP11.63□□□□□ -0.55
SS18-212ENST00000579061 SPATA2Q9UM82 520 aa11.63□□□□□ -0.55
SS18-212ENST00000579061 M0R1X1 148 aa11.62□□□□□ -0.55
SS18-212ENST00000579061 RPLP1P05386 114 aaKnown RBP11.62□□□□□ -0.55
SS18-212ENST00000579061 PSMB8P28062 276 aa11.62□□□□□ -0.55
SS18-212ENST00000579061 GNG2P59768 71 aa11.62□□□□□ -0.55
SS18-212ENST00000579061 CNIH2Q6PI25 160 aa11.62□□□□□ -0.55
SS18-212ENST00000579061 C18orf65Q6ZTR6 163 aa11.62□□□□□ -0.55
SS18-212ENST00000579061 C8orf86Q6ZUL3 223 aa11.62□□□□□ -0.55
SS18-212ENST00000579061 MRPL41Q8IXM3 137 aaKnown RBP11.62□□□□□ -0.55
SS18-212ENST00000579061 DRAXINQ8NBI3 349 aaPredicted RBP11.62□□□□□ -0.55
SS18-212ENST00000579061 NUDCD2Q8WVJ2 157 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms