RNA–Protein interactions for RNA: ENST00000578134.5

CDK5RAP3-207, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 831 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-207ENST00000578134 TMEM230Q96A57 120 aa13.8□□□□□ -0.2
CDK5RAP3-207ENST00000578134 NAA60Q9H7X0 242 aa13.8□□□□□ -0.2
CDK5RAP3-207ENST00000578134 DPM3Q9P2X0 92 aa13.8□□□□□ -0.2
CDK5RAP3-207ENST00000578134 ITGB1BP2Q9UKP3 347 aa13.8□□□□□ -0.2
CDK5RAP3-207ENST00000578134 TBL2Q9Y4P3 447 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-207ENST00000578134 SAA2-SAA4A0A096LPE2 208 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 A0A0B4J2A0 478 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 C3orf85A0A1B0GTC6 90 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 A0A1W2PPE3 182 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 C9orf170A2RU37 121 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 OOSP1A8MZH6 123 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 RNASEK-C17orf49H0YIS7 233 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 CREBL2O60519 120 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 SFT2D2O95562 160 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 DUS4LO95620 317 aaKnown RBP13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 IFNA2P01563 188 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 GAPDHP04406 335 aaKnown RBP13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 ARG1P05089 322 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 SAA2P0DJI9 122 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 VSIG10L2P0DP72 767 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 COX7A1P24310 79 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 THBS3P49746 956 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 SRPXP78539 464 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 EIF4EBP1Q13541 118 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 UTF1Q5T230 341 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 OR4P4Q8NGL7 312 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 ZNF431Q8TF32 576 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 ST6GALNAC6Q969X2 333 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 ZNF251Q9BRH9 671 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 LIN7CQ9NUP9 197 aaKnown RBP13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 SHPKQ9UHJ6 478 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 PRELID3BQ9Y3B1 194 aa13.79□□□□□ -0.2
CDK5RAP3-207ENST00000578134 ARHGAP32A7KAX9 2087 aa13.78□□□□□ -0.2
CDK5RAP3-207ENST00000578134 CSMD2Q7Z408 3487 aa13.78□□□□□ -0.2
CDK5RAP3-207ENST00000578134 PROP1O75360 226 aa13.78□□□□□ -0.2
CDK5RAP3-207ENST00000578134 HLA-AP01891 365 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-207ENST00000578134 VAMP1P23763 118 aa13.78□□□□□ -0.2
CDK5RAP3-207ENST00000578134 DUTP33316 252 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-207ENST00000578134 KIR2DS2P43631 304 aa13.78□□□□□ -0.2
CDK5RAP3-207ENST00000578134 DHRS2Q13268 280 aa13.78□□□□□ -0.2
CDK5RAP3-207ENST00000578134 PPP1R1AQ13522 171 aa13.78□□□□□ -0.2
CDK5RAP3-207ENST00000578134 MAPK1IP1LQ8NDC0 245 aa13.78□□□□□ -0.2
CDK5RAP3-207ENST00000578134 CAPSLQ8WWF8 208 aa13.78□□□□□ -0.2
CDK5RAP3-207ENST00000578134 LHX4Q969G2 390 aa13.78□□□□□ -0.2
CDK5RAP3-207ENST00000578134 MALSU1Q96EH3 234 aa13.78□□□□□ -0.2
CDK5RAP3-207ENST00000578134 MED13LQ71F56 2210 aa13.78□□□□□ -0.2
CDK5RAP3-207ENST00000578134 A0A0A6YYJ9 748 aa13.77□□□□□ -0.21
CDK5RAP3-207ENST00000578134 H0Y980 276 aa13.77□□□□□ -0.21
CDK5RAP3-207ENST00000578134 LY6LH3BQJ8 138 aa13.77□□□□□ -0.21
CDK5RAP3-207ENST00000578134 M0R1X1 148 aa13.77□□□□□ -0.21
CDK5RAP3-207ENST00000578134 RRASP10301 218 aa13.77□□□□□ -0.21
CDK5RAP3-207ENST00000578134 RPA2P15927 270 aa13.77□□□□□ -0.21
CDK5RAP3-207ENST00000578134 MC5RP33032 325 aa13.77□□□□□ -0.21
CDK5RAP3-207ENST00000578134 SUPT4H1P63272 117 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-207ENST00000578134 ZNF816Q0VGE8 651 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-207ENST00000578134 RPL39P5Q59GN2 51 aa13.77□□□□□ -0.21
CDK5RAP3-207ENST00000578134 GPR157Q5UAW9 335 aa13.77□□□□□ -0.21
CDK5RAP3-207ENST00000578134 CCDC144NLQ6NUI1 221 aa13.77□□□□□ -0.21
CDK5RAP3-207ENST00000578134 TGIF2LXQ8IUE1 241 aa13.77□□□□□ -0.21
CDK5RAP3-207ENST00000578134 COQ8AQ8NI60 647 aa13.77□□□□□ -0.21
CDK5RAP3-207ENST00000578134 MITD1Q8WV92 249 aa13.77□□□□□ -0.21
CDK5RAP3-207ENST00000578134 PHB2Q99623 299 aa13.77□□□□□ -0.21
CDK5RAP3-207ENST00000578134 BEX2Q9BXY8 128 aa13.77□□□□□ -0.21
CDK5RAP3-207ENST00000578134 BEX1Q9HBH7 125 aa13.77□□□□□ -0.21
CDK5RAP3-207ENST00000578134 ALG5Q9Y673 324 aa13.77□□□□□ -0.21
CDK5RAP3-207ENST00000578134 CENPVL3A0A0U1RRI6 287 aa13.76□□□□□ -0.21
CDK5RAP3-207ENST00000578134 RBFOX2O43251 390 aaKnown RBP eCLIP13.76□□□□□ -0.213e-11■□□□□ 9.1
CDK5RAP3-207ENST00000578134 TNFSF12O43508 249 aa13.76□□□□□ -0.21
CDK5RAP3-207ENST00000578134 ARHGDIBP52566 201 aa13.76□□□□□ -0.21
CDK5RAP3-207ENST00000578134 OR8H3Q8N146 312 aa13.76□□□□□ -0.21
CDK5RAP3-207ENST00000578134 C12orf45Q8N5I9 185 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-207ENST00000578134 IL22RA2Q969J5 263 aa13.76□□□□□ -0.21
CDK5RAP3-207ENST00000578134 RPEQ96AT9 228 aa13.76□□□□□ -0.21
CDK5RAP3-207ENST00000578134 TMEM222Q9H0R3 208 aa13.76□□□□□ -0.21
CDK5RAP3-207ENST00000578134 OR51J1Q9H342 316 aa13.76□□□□□ -0.21
CDK5RAP3-207ENST00000578134 CCDC168Q8NDH2 2452 aa13.76□□□□□ -0.21
CDK5RAP3-207ENST00000578134 MAP1AP78559 2803 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-207ENST00000578134 ASH1LQ9NR48 2969 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 IGHV1-69DA0A0B4J2H0 117 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 ATG12O94817 140 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 IGHV1-69P01742 117 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 SERPINE2P07093 398 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 CT45A6P0DMU7 189 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 CT45A5P0DMU8 189 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 CT45A7P0DMV0 189 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 UCP1P25874 307 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 CBX3Q13185 183 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 KLRD1Q13241 179 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 TMEM187Q14656 261 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 TPTE2P1Q5T6R2 138 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 DHRS7BQ6IAN0 325 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 SPNS3Q6ZMD2 512 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 LIAT1Q6ZQX7 453 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 LGI3Q8N145 548 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 CIARTQ8N365 385 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 LRTM2Q8N967 370 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 GLYATL2Q8WU03 294 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 TCTEX1D2Q8WW35 142 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 C5orf30Q96GV9 206 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 TMEM56Q96MV1 263 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms