RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 OR8B3Q8NGG8 313 aa9.27□□□□□ -0.93
SEC22B-201ENST00000578049 ZNF501Q96CX3 271 aaPredicted RBP9.27□□□□□ -0.93
SEC22B-201ENST00000578049 OR8B2Q96RD0 313 aa9.27□□□□□ -0.93
SEC22B-201ENST00000578049 RBKSQ9H477 322 aa9.27□□□□□ -0.93
SEC22B-201ENST00000578049 PLSCR2Q9NRY7 297 aa9.27□□□□□ -0.93
SEC22B-201ENST00000578049 C1QCP02747 245 aa9.27□□□□□ -0.93
SEC22B-201ENST00000578049 HOXA5P20719 270 aa9.27□□□□□ -0.93
SEC22B-201ENST00000578049 RPL27AP46776 148 aaKnown RBP9.27□□□□□ -0.93
SEC22B-201ENST00000578049 MOGAT3Q86VF5 341 aa9.27□□□□□ -0.93
SEC22B-201ENST00000578049 CT55Q8WUE5 264 aa9.27□□□□□ -0.93
SEC22B-201ENST00000578049 TM2D1Q9BX74 207 aa9.27□□□□□ -0.93
SEC22B-201ENST00000578049 MOSPD3O75425 235 aa9.27□□□□□ -0.93
SEC22B-201ENST00000578049 CD3EP07766 207 aa9.27□□□□□ -0.93
SEC22B-201ENST00000578049 OR10AG1Q8NH19 301 aa9.27□□□□□ -0.93
SEC22B-201ENST00000578049 ZNF256Q9Y2P7 627 aaPredicted RBP9.27□□□□□ -0.93
SEC22B-201ENST00000578049 SPINT1O43278 529 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 MPZP25189 248 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 HOXA4Q00056 320 aaPredicted RBP9.26□□□□□ -0.93
SEC22B-201ENST00000578049 AESQ08117 197 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 SP7Q8TDD2 431 aaPredicted RBP9.26□□□□□ -0.93
SEC22B-201ENST00000578049 SOX21Q9Y651 276 aaPredicted RBP9.26□□□□□ -0.93
SEC22B-201ENST00000578049 TMPRSS2O15393 492 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 LINC00869P0C866 280 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 MPV17P39210 176 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 RAB9AP51151 201 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 IZUMO4Q1ZYL8 232 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 ALKBH6Q3KRA9 238 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 ABHD3Q8WU67 409 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 RPP25Q9BUL9 199 aaKnown RBP9.26□□□□□ -0.93
SEC22B-201ENST00000578049 JPT1Q9UK76 154 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 IGKV1D-42A0A075B6H8 117 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 A0A1B0GTI1 187 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 A0A1W2PP11 408 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 CEACAM18A8MTB9 384 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 PTGDSP41222 190 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 ARRDC1-AS1Q9H2J1 176 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 COL24A1Q17RW2 1714 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 LIPFP07098 398 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 TAS2R60P59551 318 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 GREM1O60565 184 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 DUSP15Q9H1R2 295 aaPredicted RBP9.26□□□□□ -0.93
SEC22B-201ENST00000578049 TMEM189A5PLL7 270 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 TMEM229AB2RXF0 380 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 ZNF205O95201 554 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 COX7A1P24310 79 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 SLC35E4Q6ICL7 350 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 SCARF2Q96GP6 870 aaPredicted RBP9.26□□□□□ -0.93
SEC22B-201ENST00000578049 GSN-AS1Q9NRJ2 163 aa9.26□□□□□ -0.93
SEC22B-201ENST00000578049 PEF1Q9UBV8 284 aaKnown RBP9.26□□□□□ -0.93
SEC22B-201ENST00000578049 DNASE2O00115 360 aaPredicted RBP9.25□□□□□ -0.93
SEC22B-201ENST00000578049 MYF5P13349 255 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 UCP1P25874 307 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 CEBPDP49716 269 aaPredicted RBP9.25□□□□□ -0.93
SEC22B-201ENST00000578049 RELBQ01201 579 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 TCF24Q7RTU0 167 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 A0A1W2PR80 420 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 SHISA3A0PJX4 238 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 SCTP09683 121 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 MAS1LP35410 378 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 RPL8P62917 257 aaKnown RBP9.25□□□□□ -0.93
SEC22B-201ENST00000578049 SPTA1P02549 2419 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 CABIN1Q9Y6J0 2220 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 HINT1P49773 126 aaPredicted RBP9.25□□□□□ -0.93
SEC22B-201ENST00000578049 PRSS53Q2L4Q9 553 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 ZNF788Q6ZQV5 615 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 STPG3Q8N7X2 389 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 WDR31Q8NA23 367 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 OR2I1PQ8NGU4 316 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 FAM222BQ8WU58 562 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 DNAJC4Q9NNZ3 241 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 KCNMB2Q9Y691 235 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 A0A1W2PQF6 199 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 NDUFA2O43678 99 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 MDP1Q86V88 176 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 COPS9Q8WXC6 57 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 WFDC6Q9BQY6 131 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 DLL3Q9NYJ7 618 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 TRAV30A0A087WSZ9 112 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 RNF222A6NCQ9 220 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 RPL31P62899 125 aaKnown RBP9.25□□□□□ -0.93
SEC22B-201ENST00000578049 C9orf50Q5SZB4 431 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 APOBEC4Q8WW27 367 aaKnown RBP9.25□□□□□ -0.93
SEC22B-201ENST00000578049 ZDHHC16Q969W1 377 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 CFHR5Q9BXR6 569 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 WBP1LQ9NX94 342 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 CCDC88CQ9P219 2028 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 QSER1Q2KHR3 1735 aa9.25□□□□□ -0.93
SEC22B-201ENST00000578049 PPIHO43447 177 aaKnown RBP9.24□□□□□ -0.93
SEC22B-201ENST00000578049 OR2H2O95918 312 aa9.24□□□□□ -0.93
SEC22B-201ENST00000578049 SRP19P09132 144 aaKnown RBP9.24□□□□□ -0.93
SEC22B-201ENST00000578049 NRTNQ99748 197 aa9.24□□□□□ -0.93
SEC22B-201ENST00000578049 PCP4P48539 62 aa9.24□□□□□ -0.93
SEC22B-201ENST00000578049 UNC119Q13432 240 aa9.24□□□□□ -0.93
SEC22B-201ENST00000578049 KCNMB1Q16558 191 aa9.24□□□□□ -0.93
SEC22B-201ENST00000578049 NRN1LQ496H8 165 aa9.24□□□□□ -0.93
SEC22B-201ENST00000578049 SPANXN1Q5VSR9 72 aa9.24□□□□□ -0.93
SEC22B-201ENST00000578049 RCC1LQ96I51 464 aaKnown RBP9.24□□□□□ -0.93
SEC22B-201ENST00000578049 CRISPLD2Q9H0B8 497 aa9.24□□□□□ -0.93
SEC22B-201ENST00000578049 AURKAIP1Q9NWT8 199 aaPredicted RBP9.24□□□□□ -0.93
SEC22B-201ENST00000578049 HSPB7Q9UBY9 170 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms