RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 TGIF2LXQ8IUE1 241 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 JAGN1Q8N5M9 183 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 LINC00311Q8N616 119 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 ZNF555Q8NEP9 628 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 OR52L2PQ8NGH6 319 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 OR52M1Q8NGK5 317 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 SMIM19Q96E16 107 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 CPNE2Q96FN4 548 aaPredicted RBP4.85□□□□□ -1.63
NUP88-212ENST00000576708 S100A13Q99584 98 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 RASL11BQ9BPW5 248 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 LIN7CQ9NUP9 197 aaKnown RBP4.85□□□□□ -1.63
NUP88-212ENST00000576708 TRAPPC2LQ9UL33 140 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 MRPS28Q9Y2Q9 187 aaKnown RBP4.85□□□□□ -1.63
NUP88-212ENST00000576708 PEX16Q9Y5Y5 336 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 NBEAL2Q6ZNJ1 2754 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 TRBV5-7A0A0A0MS05 114 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 MCRIP1C9JLW8 97 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 G3V318 75 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 CIDEAO60543 219 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 GPX5O75715 221 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 MAS1P04201 325 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 SLC2A2P11168 524 aaPredicted RBP4.84□□□□□ -1.63
NUP88-212ENST00000576708 MYF6P23409 242 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 PTBP1P26599 531 aaKnown RBP eCLIP4.84□□□□□ -1.63
NUP88-212ENST00000576708 IL3RAP26951 378 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 DCKP27707 260 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 CD1BP29016 333 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 BMI1P35226 326 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 CAMLGP49069 296 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 CFHR3Q02985 330 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 FHL3Q13643 280 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 COTL1Q14019 142 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 INSL4Q14641 139 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 KIR2DS1Q14954 304 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 Q499Y3 187 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 CXorf66Q5JRM2 361 aaPredicted RBP4.84□□□□□ -1.63
NUP88-212ENST00000576708 SIGIRRQ6IA17 410 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 LAIR2Q6ISS4 152 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 UNQ9370/PRO34162Q6UXP9 181 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 SLC25A48Q6ZT89 311 aaKnown RBP4.84□□□□□ -1.63
NUP88-212ENST00000576708 LINC00596Q86U02 117 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 CCDC28AQ8IWP9 274 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 STX19Q8N4C7 294 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 FAM71E2Q8N5Q1 922 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 COMMD1Q8N668 190 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 C8orf31Q8N9H6 132 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 ZNF485Q8NCK3 441 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 CYGBQ8WWM9 190 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 GGHQ92820 318 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 TMEM80Q96HE8 168 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 PGLYRP3Q96LB9 341 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 KCTD7Q96MP8 289 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 OR5B12Q96R08 314 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 MCRIP2Q9BUT9 160 aaKnown RBP4.84□□□□□ -1.63
NUP88-212ENST00000576708 GPR61Q9BZJ8 451 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 SELENOIQ9C0D9 397 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 GNB4Q9HAV0 340 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 TAF9BQ9HBM6 251 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.84□□□□□ -1.63
NUP88-212ENST00000576708 SMPD3Q9NY59 655 aaPredicted RBP4.84□□□□□ -1.63
NUP88-212ENST00000576708 RCC2Q9P258 522 aaKnown RBP4.84□□□□□ -1.63
NUP88-212ENST00000576708 GNG12Q9UBI6 72 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 DIMT1Q9UNQ2 313 aaKnown RBP4.84□□□□□ -1.63
NUP88-212ENST00000576708 EXOSC1Q9Y3B2 195 aaKnown RBP4.84□□□□□ -1.63
NUP88-212ENST00000576708 LSM4Q9Y4Z0 139 aaKnown RBP4.84□□□□□ -1.63
NUP88-212ENST00000576708 WSB1Q9Y6I7 421 aa4.84□□□□□ -1.63
NUP88-212ENST00000576708 HUWE1Q7Z6Z7 4374 aaKnown RBP4.84□□□□□ -1.63
NUP88-212ENST00000576708 SEC14L6B5MCN3 397 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 HSBP1L1C9JCN9 74 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 SPINT2O43291 252 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 SPRY2O43597 315 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 ZNF780AO75290 641 aaPredicted RBP4.83□□□□□ -1.64
NUP88-212ENST00000576708 CRTAPO75718 401 aaPredicted RBP4.83□□□□□ -1.64
NUP88-212ENST00000576708 IGHG4P01861 327 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 NPSP0C0P6 89 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 MGMTP16455 207 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 MYL12AP19105 171 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 VDAC1P21796 283 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 PSMB8P28062 276 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 PPP1CCP36873 323 aaKnown RBP4.83□□□□□ -1.64
NUP88-212ENST00000576708 OR3A3P47888 321 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 CDX1P47902 265 aaPredicted RBP4.83□□□□□ -1.64
NUP88-212ENST00000576708 ZNF137PP52743 207 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 ST3GAL4Q11206 333 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 KIAA0141Q14154 515 aaPredicted RBP4.83□□□□□ -1.64
NUP88-212ENST00000576708 MMDQ15546 238 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 ZNF260Q3ZCT1 412 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 MORN2Q502X0 79 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 YIF1BQ5BJH7 314 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 ASPHD1Q5U4P2 390 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 AWAT2Q6E213 333 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 OR10K2Q6IF99 312 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 LYPD6Q86Y78 171 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 ODF3L1Q8IXM7 274 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 GAPTQ8N292 157 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 OR5M8Q8NGP6 311 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 OR8U1Q8NH10 309 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 MRPL30Q8TCC3 161 aaKnown RBP4.83□□□□□ -1.64
NUP88-212ENST00000576708 CASTOR1Q8WTX7 329 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms