RNA–Protein interactions for RNA: ENST00000574087.1

NUP88-208, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-208ENST00000574087 GZMMP51124 257 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 HCCSP53701 268 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 RPS28P62857 69 aaKnown RBP2.83□□□□□ -1.96
NUP88-208ENST00000574087 SELENOWP63302 87 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 GNA12Q03113 381 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 PLCXD2Q0VAA5 305 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 KIAA0087Q14695 138 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 NCMAPQ5T1S8 102 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 AKR1C8PQ5T2L2 129 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 TEX36Q5VZQ5 186 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 ZFAND6Q6FIF0 208 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 DCUN1D2Q6PH85 259 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 DUX4L9Q6RFH8 374 aaPredicted RBP2.83□□□□□ -1.96
NUP88-208ENST00000574087 AGTRAPQ6RW13 159 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 WDR82Q6UXN9 313 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
NUP88-208ENST00000574087 CALHM3Q86XJ0 350 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 H1FOOQ8IZA3 346 aaPredicted RBP2.83□□□□□ -1.96
NUP88-208ENST00000574087 OSR2Q8N2R0 312 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 SPICQ8N5J4 248 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 PACRGLQ8N7B6 248 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 WDR31Q8NA23 367 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 OR1L8Q8NGR8 309 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 DOK4Q8TEW6 326 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 PTX4Q96A99 478 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 REEP6Q96HR9 211 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 GPR82Q96P67 336 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 CLCC1Q96S66 551 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 CMSS1Q9BQ75 279 aaKnown RBP2.83□□□□□ -1.96
NUP88-208ENST00000574087 HSPB9Q9BQS6 159 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 LXNQ9BS40 222 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 EBPLQ9BY08 206 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 LINC00470Q9BZP3 86 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 TMEM126AQ9H061 195 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 CST9LQ9H4G1 147 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 ENY2Q9NPA8 101 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 SLCO1B3Q9NPD5 702 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 HRASLS2Q9NWW9 162 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 FAM206AQ9NX38 181 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 DUX4Q9UBX2 424 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 PCYOX1Q9UHG3 505 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 HSPB8Q9UJY1 196 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 CES1P1Q9UKY3 287 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 SNX10Q9Y5X0 201 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 SLC25A15Q9Y619 301 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 KIF20BQ96Q89 1820 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 MYO5BQ9ULV0 1848 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 LRP4O75096 1905 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 BCL9LQ86UU0 1499 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 CDC42BPGQ6DT37 1551 aa2.83□□□□□ -1.96
NUP88-208ENST00000574087 KIAA1551Q9HCM1 1747 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 ANKRD26Q9UPS8 1709 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 N4BP2Q86UW6 1770 aaPredicted RBP2.82□□□□□ -1.96
NUP88-208ENST00000574087 MYH3P11055 1940 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 IGKV2D-24A0A075B6R9 120 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 BORCS7-ASMTA0A0B4J1R7 106 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 A0A0G2JND7 137 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 PNMA8CA0A1B0GUJ8 204 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 A0A1B0GX51 115 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 RBMY1BA6NDE4 496 aaKnown RBP2.82□□□□□ -1.96
NUP88-208ENST00000574087 RBMY1EA6NEQ0 496 aaKnown RBP2.82□□□□□ -1.96
NUP88-208ENST00000574087 F5H5K5 113 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 ZNF593O00488 134 aaPredicted RBP2.82□□□□□ -1.96
NUP88-208ENST00000574087 HSD17B6O14756 317 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 FABP7O15540 132 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 UPK1BO75841 260 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 WISP3O95389 354 aaPredicted RBP2.82□□□□□ -1.96
NUP88-208ENST00000574087 GCGP01275 180 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 IGHV2-5P01817 119 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 RBMY1DP0C7P1 496 aaKnown RBP2.82□□□□□ -1.96
NUP88-208ENST00000574087 RBMY1A1P0DJD3 496 aaKnown RBP2.82□□□□□ -1.96
NUP88-208ENST00000574087 ABOP16442 354 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 MYL12AP19105 171 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 CD34P28906 385 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 NMUP48645 174 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 RAB5BP61020 215 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 HSPE1P61604 102 aaKnown RBP2.82□□□□□ -1.96
NUP88-208ENST00000574087 PPP1R1AQ13522 171 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 GGTLC2Q14390 218 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 PMVKQ15126 192 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 LTC4SQ16873 150 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 SLC25A35Q3KQZ1 300 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 LRRC10Q5BKY1 277 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 CLLU1Q5K131 121 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 HBMQ6B0K9 141 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 TRIM40Q6P9F5 258 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 TBPL2Q6SJ96 375 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 ZFP2Q6ZN57 461 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 STRADAQ7RTN6 431 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 CAMK2N1Q7Z7J9 78 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 SNX29P2Q8IUI4 249 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 SAXO1Q8IYX7 474 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 ZNF567Q8N184 647 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 C1orf158Q8N1D5 194 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 CBR4Q8N4T8 237 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 ATPAF2Q8N5M1 289 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 OR9I1Q8NGQ6 314 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 ZFAND1Q8TCF1 268 aa2.82□□□□□ -1.96
NUP88-208ENST00000574087 RBPMSQ93062 196 aaKnown RBP2.82□□□□□ -1.96
NUP88-208ENST00000574087 HIST1H2BAQ96A08 127 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms