RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 VEGFCP49767 419 aa16.39■□□□□ 0.21
CHRNB1-206ENST00000574054 CLDN12P56749 244 aa16.39■□□□□ 0.21
CHRNB1-206ENST00000574054 TPBGQ13641 420 aa16.39■□□□□ 0.21
CHRNB1-206ENST00000574054 DRAXINQ8NBI3 349 aaPredicted RBP16.39■□□□□ 0.21
CHRNB1-206ENST00000574054 DCUN1D4Q92564 292 aa16.39■□□□□ 0.21
CHRNB1-206ENST00000574054 ARHGAP5-AS1Q96IT6 56 aa16.39■□□□□ 0.21
CHRNB1-206ENST00000574054 ASCL2Q99929 193 aa16.39■□□□□ 0.21
CHRNB1-206ENST00000574054 AGMATQ9BSE5 352 aa16.39■□□□□ 0.21
CHRNB1-206ENST00000574054 Q9N2K0 584 aa16.39■□□□□ 0.21
CHRNB1-206ENST00000574054 GAB2Q9UQC2 676 aa16.39■□□□□ 0.21
CHRNB1-206ENST00000574054 U3KQK5 164 aa16.39■□□□□ 0.21
CHRNB1-206ENST00000574054 ITGB1BP1O14713 200 aa16.38■□□□□ 0.21
CHRNB1-206ENST00000574054 OVOL1O14753 267 aa16.38■□□□□ 0.21
CHRNB1-206ENST00000574054 SOX15O60248 233 aa16.38■□□□□ 0.21
CHRNB1-206ENST00000574054 CALRP27797 417 aaKnown RBP16.38■□□□□ 0.21
CHRNB1-206ENST00000574054 INSL3P51460 131 aa16.38■□□□□ 0.21
CHRNB1-206ENST00000574054 TMEM267Q0VDI3 215 aaPredicted RBP16.38■□□□□ 0.21
CHRNB1-206ENST00000574054 TRAM1Q15629 374 aa16.38■□□□□ 0.21
CHRNB1-206ENST00000574054 C19orf54Q5BKX5 351 aa16.38■□□□□ 0.21
CHRNB1-206ENST00000574054 PPP1R27Q86WC6 154 aa16.38■□□□□ 0.21
CHRNB1-206ENST00000574054 FAM89BQ8N5H3 189 aa16.38■□□□□ 0.21
CHRNB1-206ENST00000574054 OR5AN1Q8NGI8 311 aa16.38■□□□□ 0.21
CHRNB1-206ENST00000574054 NRG4Q8WWG1 115 aa16.38■□□□□ 0.21
CHRNB1-206ENST00000574054 CMSS1Q9BQ75 279 aaKnown RBP16.38■□□□□ 0.21
CHRNB1-206ENST00000574054 PECRQ9BY49 303 aa16.38■□□□□ 0.21
CHRNB1-206ENST00000574054 GHITMQ9H3K2 345 aa16.38■□□□□ 0.21
CHRNB1-206ENST00000574054 ISYNA1Q9NPH2 558 aa16.38■□□□□ 0.21
CHRNB1-206ENST00000574054 METTL1Q9UBP6 276 aaKnown RBP16.38■□□□□ 0.21
CHRNB1-206ENST00000574054 ZNF221Q9UK13 617 aa16.38■□□□□ 0.21
CHRNB1-206ENST00000574054 HSF4Q9ULV5 492 aa16.38■□□□□ 0.21
CHRNB1-206ENST00000574054 SAP30O75446 220 aa16.37■□□□□ 0.21
CHRNB1-206ENST00000574054 CPEP16870 476 aa16.37■□□□□ 0.21
CHRNB1-206ENST00000574054 PSMA1P25786 263 aaKnown RBP16.37■□□□□ 0.21
CHRNB1-206ENST00000574054 CRIP2P52943 208 aaPredicted RBP16.37■□□□□ 0.21
CHRNB1-206ENST00000574054 SLURP1P55000 103 aa16.37■□□□□ 0.21
CHRNB1-206ENST00000574054 UNQ5815/PRO19632Q6UWF5 114 aa16.37■□□□□ 0.21
CHRNB1-206ENST00000574054 TCTEX1D1Q8N7M0 179 aa16.37■□□□□ 0.21
CHRNB1-206ENST00000574054 FAM3DQ96BQ1 224 aa16.37■□□□□ 0.21
CHRNB1-206ENST00000574054 FAM103A1Q9BTL3 118 aaKnown RBP16.37■□□□□ 0.21
CHRNB1-206ENST00000574054 DUSP21Q9H596 190 aa16.37■□□□□ 0.21
CHRNB1-206ENST00000574054 SORL1Q92673 2214 aa16.37■□□□□ 0.21
CHRNB1-206ENST00000574054 FOXI3A8MTJ6 420 aaPredicted RBP16.36■□□□□ 0.21
CHRNB1-206ENST00000574054 LINC01619G3V211 115 aa16.36■□□□□ 0.21
CHRNB1-206ENST00000574054 LGALS1P09382 135 aaKnown RBP16.36■□□□□ 0.21
CHRNB1-206ENST00000574054 EGR2P11161 476 aaPredicted RBP16.36■□□□□ 0.21
CHRNB1-206ENST00000574054 TMEM50BP56557 158 aa16.36■□□□□ 0.21
CHRNB1-206ENST00000574054 MLLT11Q13015 90 aaPredicted RBP16.36■□□□□ 0.21
CHRNB1-206ENST00000574054 PSG5Q15238 335 aa16.36■□□□□ 0.21
CHRNB1-206ENST00000574054 ACTBL2Q562R1 376 aa16.36■□□□□ 0.21
CHRNB1-206ENST00000574054 ZNF429Q86V71 674 aa16.36■□□□□ 0.21
CHRNB1-206ENST00000574054 OR56B1Q8NGI3 324 aa16.36■□□□□ 0.21
CHRNB1-206ENST00000574054 DLX4Q92988 240 aaPredicted RBP16.36■□□□□ 0.21
CHRNB1-206ENST00000574054 TOLLIPQ9H0E2 274 aa16.36■□□□□ 0.21
CHRNB1-206ENST00000574054 NUBP2Q9Y5Y2 271 aa16.36■□□□□ 0.21
CHRNB1-206ENST00000574054 TRDCB7Z8K6 153 aa16.35■□□□□ 0.21
CHRNB1-206ENST00000574054 CA2P00918 260 aa16.35■□□□□ 0.21
CHRNB1-206ENST00000574054 IGHV3-11P01762 117 aa16.35■□□□□ 0.21
CHRNB1-206ENST00000574054 APOA2P02652 100 aa16.35■□□□□ 0.21
CHRNB1-206ENST00000574054 SNRPBP14678 240 aaKnown RBP16.35■□□□□ 0.21
CHRNB1-206ENST00000574054 MAP2K4P45985 399 aa16.35■□□□□ 0.21
CHRNB1-206ENST00000574054 LINC00205P59089 165 aa16.35■□□□□ 0.21
CHRNB1-206ENST00000574054 RPS16P62249 146 aaKnown RBP16.35■□□□□ 0.21
CHRNB1-206ENST00000574054 MRPS15P82914 257 aaKnown RBP16.35■□□□□ 0.21
CHRNB1-206ENST00000574054 FABP5Q01469 135 aa16.35■□□□□ 0.21
CHRNB1-206ENST00000574054 C2orf76Q3KRA6 126 aa16.35■□□□□ 0.21
CHRNB1-206ENST00000574054 PYHIN1Q6K0P9 492 aa16.35■□□□□ 0.21
CHRNB1-206ENST00000574054 PTX4Q96A99 478 aa16.35■□□□□ 0.21
CHRNB1-206ENST00000574054 MS4A10Q96PG2 267 aa16.35■□□□□ 0.21
CHRNB1-206ENST00000574054 TSNAXQ99598 290 aaKnown RBP16.35■□□□□ 0.21
CHRNB1-206ENST00000574054 RNF5Q99942 180 aa16.35■□□□□ 0.21
CHRNB1-206ENST00000574054 IGHV4OR15-8A0A075B7B6 117 aa16.34■□□□□ 0.21
CHRNB1-206ENST00000574054 A0A087WW49 117 aa16.34■□□□□ 0.21
CHRNB1-206ENST00000574054 IGKV1-6A0A0C4DH72 117 aa16.34■□□□□ 0.21
CHRNB1-206ENST00000574054 DENRO43583 198 aaKnown RBP16.34■□□□□ 0.21
CHRNB1-206ENST00000574054 IGKV1-16P04430 117 aa16.34■□□□□ 0.21
CHRNB1-206ENST00000574054 TFAP2AP05549 437 aa16.34■□□□□ 0.21
CHRNB1-206ENST00000574054 TPPP2P59282 170 aa16.34■□□□□ 0.21
CHRNB1-206ENST00000574054 PLAC9Q5JTB6 97 aa16.34■□□□□ 0.21
CHRNB1-206ENST00000574054 HES5Q5TA89 166 aa16.34■□□□□ 0.21
CHRNB1-206ENST00000574054 CD200R1LQ6Q8B3 271 aa16.34■□□□□ 0.21
CHRNB1-206ENST00000574054 ZNF383Q8NA42 475 aa16.34■□□□□ 0.21
CHRNB1-206ENST00000574054 LFNGQ8NES3 379 aa16.34■□□□□ 0.21
CHRNB1-206ENST00000574054 GRPEL2Q8TAA5 225 aa16.34■□□□□ 0.21
CHRNB1-206ENST00000574054 MGLLQ99685 303 aa16.34■□□□□ 0.21
CHRNB1-206ENST00000574054 RDH8Q9NYR8 311 aa16.34■□□□□ 0.21
CHRNB1-206ENST00000574054 V9GY05 133 aa16.34■□□□□ 0.21
CHRNB1-206ENST00000574054 TMEM272A0A1B0GTI8 110 aa16.33■□□□□ 0.2
CHRNB1-206ENST00000574054 M0R1X1 148 aa16.33■□□□□ 0.2
CHRNB1-206ENST00000574054 PROP1O75360 226 aa16.33■□□□□ 0.2
CHRNB1-206ENST00000574054 CD3GP09693 182 aa16.33■□□□□ 0.2
CHRNB1-206ENST00000574054 CD40LGP29965 261 aa16.33■□□□□ 0.2
CHRNB1-206ENST00000574054 RANBP1P43487 201 aa16.33■□□□□ 0.2
CHRNB1-206ENST00000574054 PLA2G7Q13093 441 aa16.33■□□□□ 0.2
CHRNB1-206ENST00000574054 ZNF562Q6V9R5 426 aa16.33■□□□□ 0.2
CHRNB1-206ENST00000574054 PRSS48Q7RTY5 328 aa16.33■□□□□ 0.2
CHRNB1-206ENST00000574054 ARPC1AQ92747 370 aa16.33■□□□□ 0.2
CHRNB1-206ENST00000574054 ACOT13Q9NPJ3 140 aa16.33■□□□□ 0.2
CHRNB1-206ENST00000574054 TPSG1Q9NRR2 321 aa16.33■□□□□ 0.2
CHRNB1-206ENST00000574054 SMAD5-AS1Q9Y6J3 95 aa16.33■□□□□ 0.2
CHRNB1-206ENST00000574054 BET1O15155 118 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms