RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 CEACAM18A8MTB9 384 aa8.5□□□□□ -1.05
SMG6-213ENST00000573166 SNRNP70P08621 437 aaKnown RBP8.5□□□□□ -1.05
SMG6-213ENST00000573166 TMUB2Q71RG4 321 aa8.5□□□□□ -1.05
SMG6-213ENST00000573166 S100A7AQ86SG5 101 aa8.5□□□□□ -1.05
SMG6-213ENST00000573166 OR13A1Q8NGR1 328 aa8.5□□□□□ -1.05
SMG6-213ENST00000573166 RASL11BQ9BPW5 248 aa8.5□□□□□ -1.05
SMG6-213ENST00000573166 PSENENQ9NZ42 101 aa8.5□□□□□ -1.05
SMG6-213ENST00000573166 JPT1Q9UK76 154 aa8.5□□□□□ -1.05
SMG6-213ENST00000573166 NQO2P16083 231 aa8.5□□□□□ -1.05
SMG6-213ENST00000573166 ZNF266Q14584 549 aa8.5□□□□□ -1.05
SMG6-213ENST00000573166 RSPO1Q2MKA7 263 aaPredicted RBP8.5□□□□□ -1.05
SMG6-213ENST00000573166 GGNBP1Q5YKI7 109 aa8.5□□□□□ -1.05
SMG6-213ENST00000573166 TMEM42Q69YG0 159 aa8.5□□□□□ -1.05
SMG6-213ENST00000573166 LHX4Q969G2 390 aa8.5□□□□□ -1.05
SMG6-213ENST00000573166 C7orf69Q9H7B7 122 aa8.5□□□□□ -1.05
SMG6-213ENST00000573166 ZNF835Q9Y2P0 537 aa8.5□□□□□ -1.05
SMG6-213ENST00000573166 TEX29Q8N6K0 151 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 MRGPRFQ96AM1 343 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 TRAF4Q9BUZ4 470 aaPredicted RBP8.49□□□□□ -1.05
SMG6-213ENST00000573166 FAM212BQ9NTI7 297 aaPredicted RBP8.49□□□□□ -1.05
SMG6-213ENST00000573166 E5RGE8 158 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 TMEM178BH3BS89 294 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 DFFBO76075 338 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 SELLP14151 372 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 CCL3L1P16619 93 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 VDAC1P21796 283 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 PPT1P50897 306 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 TUSC1Q2TAM9 212 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 C3orf36Q3SXR2 165 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 MARC2Q969Z3 335 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 TMEM231Q9H6L2 316 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 NSG2Q9Y328 171 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 SONP18583 2426 aaKnown RBP8.49□□□□□ -1.05
SMG6-213ENST00000573166 SRSF10O75494 262 aaKnown RBP8.49□□□□□ -1.05
SMG6-213ENST00000573166 SPINK9Q5DT21 86 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 LIAT1Q6ZQX7 453 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 ADAD2Q8NCV1 583 aaKnown RBP8.49□□□□□ -1.05
SMG6-213ENST00000573166 LILRB1Q8NHL6 650 aaPredicted RBP8.49□□□□□ -1.05
SMG6-213ENST00000573166 LURAP1Q96LR2 239 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 RAB18Q9NP72 206 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 FKBP11Q9NYL4 201 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 C17orf112F2Z3M2 114 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 F8VVB4 439 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 F8VWA3 439 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 MEF2CQ06413 473 aaPredicted RBP8.49□□□□□ -1.05
SMG6-213ENST00000573166 ZNF324BQ6AW86 544 aaPredicted RBP8.49□□□□□ -1.05
SMG6-213ENST00000573166 PLPPR1Q8TBJ4 325 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 MARVELD3Q96A59 401 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 RBMXL1Q96E39 390 aaKnown RBP8.49□□□□□ -1.05
SMG6-213ENST00000573166 GPHA2Q96T91 129 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 GFI1Q99684 422 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 TMUB1Q9BVT8 246 aa8.49□□□□□ -1.05
SMG6-213ENST00000573166 TOX4O94842 621 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 RRASP10301 218 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 COL8A1P27658 744 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 RPL12P30050 165 aaKnown RBP8.48□□□□□ -1.05
SMG6-213ENST00000573166 BTCP35070 178 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 ZP1P60852 638 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 ZNF674Q2M3X9 581 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 TMEM65Q6PI78 240 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 RNF144BQ7Z419 303 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 SLC25A42Q86VD7 318 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 BVESQ8NE79 360 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 ANGPTL6Q8NI99 470 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 ITLN2Q8WWU7 325 aaPredicted RBP8.48□□□□□ -1.05
SMG6-213ENST00000573166 SLC25A28Q96A46 364 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 FBLN5Q9UBX5 448 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 TXNL1O43396 289 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 CST7O76096 145 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 FGF2P09038 288 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 CXCL2P19875 107 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 MC5RP33032 325 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 CLEC12BQ2HXU8 276 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 LINC00312Q9Y6C7 94 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 DNAH14Q0VDD8 3507 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 TRAV24A0A0B4J272 114 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 KBTBD11-OT1A0A1B0GTJ5 212 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 COL8A2P25067 703 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 OVCH2Q7RTZ1 564 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 RHOVQ96L33 236 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 PARP12Q9H0J9 701 aaKnown RBP8.48□□□□□ -1.05
SMG6-213ENST00000573166 VSIG4Q9Y279 399 aa8.48□□□□□ -1.05
SMG6-213ENST00000573166 RAB19A4D1S5 217 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 FABP1P07148 127 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 S100A7P31151 101 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 G6PCP35575 357 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 TMEM30BQ3MIR4 351 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 MOB3AQ96BX8 217 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 RCL1Q9Y2P8 373 aaKnown RBP8.47□□□□□ -1.05
SMG6-213ENST00000573166 NOTCH3Q9UM47 2321 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 RPS10-NUDT3A0A1W2PQS6 291 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 C7orf66A4D0T2 115 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 ZFP92A6NM28 416 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 MELTFP08582 738 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 ACAA1P09110 424 aaPredicted RBP8.47□□□□□ -1.05
SMG6-213ENST00000573166 FAM106CPP0CH98 169 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 AGAP20933 346 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 RPS10P46783 165 aaKnown RBP8.47□□□□□ -1.05
SMG6-213ENST00000573166 DSCR9P59020 149 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 HMGN3Q15651 99 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms