RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 ZNF778Q96MU6 729 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 IP6K3Q96PC2 410 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 NMNAT3Q96T66 252 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 NDFIP1Q9BT67 221 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 TMEM243Q9BU79 118 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 PAXXQ9BUH6 204 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 KRTAP9-3Q9BYQ3 159 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 SMIM3Q9BZL3 60 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 OR2H1Q9GZK4 316 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 SLC25A22Q9H936 323 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 MRPL16Q9NX20 251 aaKnown RBP3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 DHCR7Q9UBM7 475 aaKnown RBP3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 NAT8BQ9UHF3 227 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 ANAPC10Q9UM13 185 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 NFASCO94856 1347 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 IBTKQ9P2D0 1353 aaPredicted RBP3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 MYH3P11055 1940 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 TMEM131Q92545 1883 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 TTC37Q6PGP7 1564 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 IGLV4-3A0A075B6K6 122 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 TMED7-TICAM2A0A0A6YYA0 188 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 TRAV4A0A0B4J268 109 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 IGHV1-69-2A0A0G2JMI3 117 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 TMEM269A0A1B0GVZ9 245 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 CIB4A0PJX0 185 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 C9JAW5 83 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 PRAC2D3DTV9 90 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 PEX7O00628 323 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 ISLRO14498 428 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 IFNA17P01571 189 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 IGHV3-48P01763 117 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 FABP3P05413 133 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 HLA-DQB2P05538 268 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 SCGB1C2P0DMR2 95 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 MUC1P15941 1255 aaPredicted RBP3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 COX7A1P24310 79 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 KDELR1P24390 212 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 ATP5G3P48201 142 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 PSMB3P49720 205 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 FHL1Q13642 323 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 RBMY1FQ15415 496 aaKnown RBP3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 ZNF239Q16600 458 aaKnown RBP3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 ZFP69Q49AA0 526 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 SCIMPQ6UWF3 145 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 TMUB2Q71RG4 321 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 IFT20Q8IY31 132 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 TCTE3Q8IZS6 198 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 EXOC3-AS1Q8N2X6 119 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 ZNF433Q8N7K0 673 aaPredicted RBP3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 OR2T27Q8NH04 317 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 SCGB1C1Q8TD33 95 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 KLK6Q92876 244 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 PHYHIPLQ96FC7 376 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 KCNS1Q96KK3 526 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 YPEL4Q96NS1 127 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 LPAR5Q9H1C0 372 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 CACYBPQ9HB71 228 aaKnown RBP3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 PDFQ9HBH1 243 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 CCL28Q9NRJ3 127 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 ZNF230Q9UIE0 474 aaPredicted RBP3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 HIGD1AQ9Y241 93 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 MED31Q9Y3C7 131 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 NEUROG3Q9Y4Z2 214 aa3.82□□□□□ -1.8
TOPBP1-210ENST00000572787 HECW2Q9P2P5 1572 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 RAPGEF2Q9Y4G8 1499 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 IGKV1-27A0A075B6S5 117 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 TRAV5A0A0B4J249 113 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 LY6G6EA0A0G2JKS1 128 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 FABP5P3A8MUU1 101 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 SAP18O00422 153 aaKnown RBP3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 COX7A2P2O60397 106 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 RAMP2O60895 175 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 APOMO95445 188 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 NRASP01111 189 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 IL2RGP31785 369 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 POLR2IP36954 125 aaKnown RBP3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 DEFA1P59665 94 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 PKIAP61925 76 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 PPP1CAP62136 330 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 GNA12Q03113 381 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 CST6Q15828 149 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 PRR4Q16378 134 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 FAM53AQ6NSI3 398 aaPredicted RBP3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 RNF165Q6ZSG1 346 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 SHISA6Q6ZSJ9 500 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 FAM19A3Q7Z5A8 133 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 LINC00596Q86U02 117 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 LINC01551Q86U37 167 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 MDP1Q86V88 176 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 C8orf59Q8N0T1 100 aaPredicted RBP3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 TMEM61Q8N0U2 210 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 ACBD7Q8N6N7 88 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 TMEM75Q8N9X5 138 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 TERB2Q8NHR7 220 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 ORAOV1Q8WV07 137 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 ATOH8Q96SQ7 321 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 KCNIP2Q9NS61 270 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 MCTS1Q9ULC4 181 aaKnown RBP3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 HS3ST2Q9Y278 367 aa3.81□□□□□ -1.8
TOPBP1-210ENST00000572787 ZFP30Q9Y2G7 519 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms