RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 CD1BP29016 333 aa12.59□□□□□ -0.39
CHD3-215ENST00000572750 PROK1P58294 105 aa12.59□□□□□ -0.39
CHD3-215ENST00000572750 ARPC4P59998 168 aa12.59□□□□□ -0.39
CHD3-215ENST00000572750 CNIH2Q6PI25 160 aa12.59□□□□□ -0.39
CHD3-215ENST00000572750 GLDNQ6ZMI3 551 aaPredicted RBP12.59□□□□□ -0.39
CHD3-215ENST00000572750 HOGA1Q86XE5 327 aa12.59□□□□□ -0.39
CHD3-215ENST00000572750 Q8N6K4 173 aa12.59□□□□□ -0.39
CHD3-215ENST00000572750 OR2T10Q8NGZ9 312 aa12.59□□□□□ -0.39
CHD3-215ENST00000572750 OR8U1Q8NH10 309 aa12.59□□□□□ -0.39
CHD3-215ENST00000572750 C5orf30Q96GV9 206 aa12.59□□□□□ -0.39
CHD3-215ENST00000572750 ZNF747Q9BV97 191 aa12.59□□□□□ -0.39
CHD3-215ENST00000572750 PRSS22Q9GZN4 317 aa12.59□□□□□ -0.39
CHD3-215ENST00000572750 MIXL1Q9H2W2 232 aa12.59□□□□□ -0.39
CHD3-215ENST00000572750 ZNF221Q9UK13 617 aa12.59□□□□□ -0.39
CHD3-215ENST00000572750 SMIM31A0A1B0GVY4 71 aa12.58□□□□□ -0.4
CHD3-215ENST00000572750 J3QRK9 145 aa12.58□□□□□ -0.4
CHD3-215ENST00000572750 RGS5O15539 181 aa12.58□□□□□ -0.4
CHD3-215ENST00000572750 MOSP00540 346 aa12.58□□□□□ -0.4
CHD3-215ENST00000572750 HLA-DQB1P01920 261 aa12.58□□□□□ -0.4
CHD3-215ENST00000572750 CBX5P45973 191 aa12.58□□□□□ -0.4
CHD3-215ENST00000572750 KRTAP10-3P60369 221 aa12.58□□□□□ -0.4
CHD3-215ENST00000572750 EBI3Q14213 229 aa12.58□□□□□ -0.4
CHD3-215ENST00000572750 ARSJQ5FYB0 599 aaPredicted RBP12.58□□□□□ -0.4
CHD3-215ENST00000572750 FAM131AQ6UXB0 335 aa12.58□□□□□ -0.4
CHD3-215ENST00000572750 Q8N2B8 174 aa12.58□□□□□ -0.4
CHD3-215ENST00000572750 C5orf56Q8N8D9 126 aa12.58□□□□□ -0.4
CHD3-215ENST00000572750 DRAXINQ8NBI3 349 aaPredicted RBP12.58□□□□□ -0.4
CHD3-215ENST00000572750 EXTL2Q9UBQ6 330 aa12.58□□□□□ -0.4
CHD3-215ENST00000572750 M0R1X1 148 aa12.57□□□□□ -0.4
CHD3-215ENST00000572750 CTDSP2O14595 271 aa12.57□□□□□ -0.4
CHD3-215ENST00000572750 PROP1O75360 226 aa12.57□□□□□ -0.4
CHD3-215ENST00000572750 CTXN2P0C2S0 81 aa12.57□□□□□ -0.4
CHD3-215ENST00000572750 CT45A6P0DMU7 189 aa12.57□□□□□ -0.4
CHD3-215ENST00000572750 CT45A5P0DMU8 189 aa12.57□□□□□ -0.4
CHD3-215ENST00000572750 CT45A7P0DMV0 189 aa12.57□□□□□ -0.4
CHD3-215ENST00000572750 PRSS3P35030 304 aa12.57□□□□□ -0.4
CHD3-215ENST00000572750 LINC00205P59089 165 aa12.57□□□□□ -0.4
CHD3-215ENST00000572750 RNASE12Q5GAN4 147 aaKnown RBP12.57□□□□□ -0.4
CHD3-215ENST00000572750 C9orf152Q5JTZ5 239 aa12.57□□□□□ -0.4
CHD3-215ENST00000572750 KLHDC1Q8N7A1 406 aa12.57□□□□□ -0.4
CHD3-215ENST00000572750 DCUN1D5Q9BTE7 237 aa12.57□□□□□ -0.4
CHD3-215ENST00000572750 SLIRPQ9GZT3 109 aaKnown RBP12.57□□□□□ -0.4
CHD3-215ENST00000572750 C6orf62Q9GZU0 229 aaPredicted RBP12.57□□□□□ -0.4
CHD3-215ENST00000572750 GHITMQ9H3K2 345 aa12.57□□□□□ -0.4
CHD3-215ENST00000572750 SERTAD4Q9NUC0 356 aa12.57□□□□□ -0.4
CHD3-215ENST00000572750 SDHAF2Q9NX18 166 aa12.57□□□□□ -0.4
CHD3-215ENST00000572750 RSL24D1Q9UHA3 163 aaKnown RBP12.57□□□□□ -0.4
CHD3-215ENST00000572750 ANAPC10Q9UM13 185 aa12.57□□□□□ -0.4
CHD3-215ENST00000572750 RBM7Q9Y580 266 aaKnown RBP12.57□□□□□ -0.4
CHD3-215ENST00000572750 NCBP2LA6PVI3 153 aaKnown RBP12.56□□□□□ -0.4
CHD3-215ENST00000572750 H0YJW9 148 aa12.56□□□□□ -0.4
CHD3-215ENST00000572750 M0QZK8 103 aa12.56□□□□□ -0.4
CHD3-215ENST00000572750 VSIG10L2P0DP72 767 aa12.56□□□□□ -0.4
CHD3-215ENST00000572750 VDAC2P45880 294 aaPredicted RBP12.56□□□□□ -0.4
CHD3-215ENST00000572750 C11orf88Q6PI97 169 aa12.56□□□□□ -0.4
CHD3-215ENST00000572750 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.56□□□□□ -0.4
CHD3-215ENST00000572750 RITA1Q96K30 269 aa12.56□□□□□ -0.4
CHD3-215ENST00000572750 NECAP2Q9NVZ3 263 aa12.56□□□□□ -0.4
CHD3-215ENST00000572750 OR2W1Q9Y3N9 320 aa12.56□□□□□ -0.4
CHD3-215ENST00000572750 IGKV1D-13A0A0B4J2D9 117 aa12.55□□□□□ -0.4
CHD3-215ENST00000572750 OR5H14A6NHG9 310 aa12.55□□□□□ -0.4
CHD3-215ENST00000572750 FGF16O43320 207 aa12.55□□□□□ -0.4
CHD3-215ENST00000572750 IGKV1-13P0DP09 117 aa12.55□□□□□ -0.4
CHD3-215ENST00000572750 CNTFRP26992 372 aa12.55□□□□□ -0.4
CHD3-215ENST00000572750 F2RL1P55085 397 aa12.55□□□□□ -0.4
CHD3-215ENST00000572750 ACTBP60709 375 aa12.55□□□□□ -0.4
CHD3-215ENST00000572750 MMDQ15546 238 aa12.55□□□□□ -0.4
CHD3-215ENST00000572750 PRR31Q5SQ13 230 aa12.55□□□□□ -0.4
CHD3-215ENST00000572750 ZNF383Q8NA42 475 aa12.55□□□□□ -0.4
CHD3-215ENST00000572750 GPX8Q8TED1 209 aa12.55□□□□□ -0.4
CHD3-215ENST00000572750 ADAM30Q9UKF2 790 aa12.55□□□□□ -0.4
CHD3-215ENST00000572750 H7C2Y5 167 aa12.54□□□□□ -0.4
CHD3-215ENST00000572750 OR5H8P0DN80 308 aa12.54□□□□□ -0.4
CHD3-215ENST00000572750 AADACP22760 399 aa12.54□□□□□ -0.4
CHD3-215ENST00000572750 FCGR2CP31995 323 aa12.54□□□□□ -0.4
CHD3-215ENST00000572750 LUMP51884 338 aaPredicted RBP12.54□□□□□ -0.4
CHD3-215ENST00000572750 SHISA2Q6UWI4 295 aa12.54□□□□□ -0.4
CHD3-215ENST00000572750 FAM71E2Q8N5Q1 922 aa12.54□□□□□ -0.4
CHD3-215ENST00000572750 Q8N9W7 124 aa12.54□□□□□ -0.4
CHD3-215ENST00000572750 OR5AP2Q8NGF4 316 aa12.54□□□□□ -0.4
CHD3-215ENST00000572750 OR5AN1Q8NGI8 311 aa12.54□□□□□ -0.4
CHD3-215ENST00000572750 MCFD2Q8NI22 146 aa12.54□□□□□ -0.4
CHD3-215ENST00000572750 SCPEP1Q9HB40 452 aa12.54□□□□□ -0.4
CHD3-215ENST00000572750 PLSCR3Q9NRY6 295 aa12.54□□□□□ -0.4
CHD3-215ENST00000572750 EHFQ9NZC4 300 aa12.54□□□□□ -0.4
CHD3-215ENST00000572750 WASHC3Q9Y3C0 194 aa12.54□□□□□ -0.4
CHD3-215ENST00000572750 PEX14O75381 377 aa12.53□□□□□ -0.4
CHD3-215ENST00000572750 TUSC2O75896 110 aa12.53□□□□□ -0.4
CHD3-215ENST00000572750 PMP2P02689 132 aa12.53□□□□□ -0.4
CHD3-215ENST00000572750 NAT1P18440 290 aa12.53□□□□□ -0.4
CHD3-215ENST00000572750 CDK10Q15131 360 aa12.53□□□□□ -0.4
CHD3-215ENST00000572750 ZNF645Q8N7E2 425 aa12.53□□□□□ -0.4
CHD3-215ENST00000572750 C11orf44Q8N8P7 122 aa12.53□□□□□ -0.4
CHD3-215ENST00000572750 ABHD1Q96SE0 405 aa12.53□□□□□ -0.4
CHD3-215ENST00000572750 CITED1Q99966 193 aa12.53□□□□□ -0.4
CHD3-215ENST00000572750 ZNF701M0R085 212 aaPredicted RBP12.52□□□□□ -0.41
CHD3-215ENST00000572750 PPYP01298 95 aa12.52□□□□□ -0.41
CHD3-215ENST00000572750 IGLV2-14P01704 120 aa12.52□□□□□ -0.41
CHD3-215ENST00000572750 APOA2P02652 100 aa12.52□□□□□ -0.41
CHD3-215ENST00000572750 IGKV1-16P04430 117 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms