RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 CD55P08174 381 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 CELA3AP09093 270 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 G6PCP35575 357 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 PMP22Q01453 160 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 ZNF816Q0VGE8 651 aaPredicted RBP9.08□□□□□ -0.96
CCDC40-207ENST00000572253 CLEC12BQ2HXU8 276 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 H2BFWTQ7Z2G1 175 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 CISD2Q8N5K1 135 aaKnown RBP9.08□□□□□ -0.96
CCDC40-207ENST00000572253 SCCPDHQ8NBX0 429 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 OR5T1Q8NG75 326 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 DTD1Q8TEA8 209 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 TMEM37Q8WXS4 190 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 RAB24Q969Q5 203 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 IER2Q9BTL4 223 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 SMOC1Q9H4F8 434 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 CLN8Q9UBY8 286 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 LOXL2Q9Y4K0 774 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 LRRC30A6NM36 301 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 PAGE4O60829 102 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 IGKV1D-33P01593 117 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 IGKV1-33P01594 117 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 TLE1Q04724 770 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 MRPL41Q8IXM3 137 aaKnown RBP9.08□□□□□ -0.96
CCDC40-207ENST00000572253 ZNF808Q8N4W9 903 aaPredicted RBP9.08□□□□□ -0.96
CCDC40-207ENST00000572253 WASF3Q9UPY6 502 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 WIPI2Q9Y4P8 454 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 TNRC6BQ9UPQ9 1833 aaKnown RBP9.08□□□□□ -0.96
CCDC40-207ENST00000572253 MT-CO3P00414 261 aa9.07□□□□□ -0.96
CCDC40-207ENST00000572253 CCKARP32238 428 aa9.07□□□□□ -0.96
CCDC40-207ENST00000572253 MAGEA5P43359 124 aa9.07□□□□□ -0.96
CCDC40-207ENST00000572253 HLA-CQ95604 372 aa9.07□□□□□ -0.96
CCDC40-207ENST00000572253 TAAR6Q96RI8 345 aa9.07□□□□□ -0.96
CCDC40-207ENST00000572253 ZPBPQ9BS86 351 aa9.07□□□□□ -0.96
CCDC40-207ENST00000572253 C12orf49Q9H741 205 aa9.07□□□□□ -0.96
CCDC40-207ENST00000572253 MBNL3Q9NUK0 354 aaKnown RBP9.07□□□□□ -0.96
CCDC40-207ENST00000572253 FUT9Q9Y231 359 aa9.07□□□□□ -0.96
CCDC40-207ENST00000572253 GZMBP10144 247 aa9.07□□□□□ -0.96
CCDC40-207ENST00000572253 OR3A1P47881 315 aa9.07□□□□□ -0.96
CCDC40-207ENST00000572253 CDC34P49427 236 aaPredicted RBP9.07□□□□□ -0.96
CCDC40-207ENST00000572253 OR1C1Q15619 314 aa9.07□□□□□ -0.96
CCDC40-207ENST00000572253 NUFIP2Q7Z417 695 aaKnown RBP9.07□□□□□ -0.96
CCDC40-207ENST00000572253 C11orf94C9JXX5 98 aa9.07□□□□□ -0.96
CCDC40-207ENST00000572253 C3orf80F5H4A9 247 aa9.07□□□□□ -0.96
CCDC40-207ENST00000572253 J3QW42 95 aa9.07□□□□□ -0.96
CCDC40-207ENST00000572253 TAS2R60P59551 318 aa9.07□□□□□ -0.96
CCDC40-207ENST00000572253 MDP1Q86V88 176 aa9.07□□□□□ -0.96
CCDC40-207ENST00000572253 TCTEX1D1Q8N7M0 179 aa9.07□□□□□ -0.96
CCDC40-207ENST00000572253 TTTY12Q9BZ98 90 aa9.07□□□□□ -0.96
CCDC40-207ENST00000572253 NCKAP5O14513 1909 aa9.07□□□□□ -0.96
CCDC40-207ENST00000572253 ODAMA1E959 279 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 HAND1O96004 215 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 Q3ZCU0 254 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 NPCDR1Q9BY65 106 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 PATE3B3GLJ2 98 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 CDIPTO14735 213 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 RAB29O14966 203 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 GGCTO75223 188 aaKnown RBP9.06□□□□□ -0.96
CCDC40-207ENST00000572253 NEURL1O76050 574 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 PDGFBP01127 241 aaPredicted RBP9.06□□□□□ -0.96
CCDC40-207ENST00000572253 RTP5Q14D33 572 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 P2RY6Q15077 328 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 IQCJQ1A5X6 159 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 ELOVL1Q9BW60 279 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.06□□□□□ -0.96
CCDC40-207ENST00000572253 A0A1W2PPV4 95 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 PDE6DO43924 150 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 SOX15O60248 233 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 CLDN14O95500 239 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 GRPP07492 148 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 NUBP1P53384 320 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 PPP1CBP62140 327 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 LCN2P80188 198 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 ZNF146Q15072 292 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 IGFBP7Q16270 282 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 CST9LP1Q5W188 147 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 TMEM251Q8N6I4 163 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 OR1L1Q8NH94 360 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 MRPL37Q9BZE1 423 aaKnown RBP9.06□□□□□ -0.96
CCDC40-207ENST00000572253 OR6C3Q9NZP0 311 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 SPTBN5Q9NRC6 3674 aaKnown RBP9.06□□□□□ -0.96
CCDC40-207ENST00000572253 TRIOO75962 3097 aa9.06□□□□□ -0.96
CCDC40-207ENST00000572253 OOEPA6NGQ2 149 aa9.05□□□□□ -0.96
CCDC40-207ENST00000572253 SELEP16581 610 aa9.05□□□□□ -0.96
CCDC40-207ENST00000572253 GZMHP20718 246 aa9.05□□□□□ -0.96
CCDC40-207ENST00000572253 G0S2P27469 103 aa9.05□□□□□ -0.96
CCDC40-207ENST00000572253 UBE2NP61088 152 aaKnown RBP9.05□□□□□ -0.96
CCDC40-207ENST00000572253 GABRA6Q16445 453 aa9.05□□□□□ -0.96
CCDC40-207ENST00000572253 ACTL10Q5JWF8 245 aa9.05□□□□□ -0.96
CCDC40-207ENST00000572253 BCL2L2Q92843 193 aaPredicted RBP9.05□□□□□ -0.96
CCDC40-207ENST00000572253 NDUFAF3Q9BU61 184 aa9.05□□□□□ -0.96
CCDC40-207ENST00000572253 ZG16O60844 167 aa9.05□□□□□ -0.96
CCDC40-207ENST00000572253 S1PR2O95136 353 aa9.05□□□□□ -0.96
CCDC40-207ENST00000572253 CHRNA7P36544 502 aa9.05□□□□□ -0.96
CCDC40-207ENST00000572253 ERVK11-1P61568 191 aa9.05□□□□□ -0.96
CCDC40-207ENST00000572253 RPP30P78346 268 aaKnown RBP9.05□□□□□ -0.96
CCDC40-207ENST00000572253 TFF3Q07654 80 aa9.05□□□□□ -0.96
CCDC40-207ENST00000572253 C2orf88Q9BSF0 95 aa9.05□□□□□ -0.96
CCDC40-207ENST00000572253 HES7Q9BYE0 225 aa9.05□□□□□ -0.96
CCDC40-207ENST00000572253 CHD3Q12873 2000 aaKnown RBP9.05□□□□□ -0.96
CCDC40-207ENST00000572253 TMEM210A6NLX4 147 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms