RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 LINC00473A8K010 186 aa18.55■□□□□ 0.56
VCPKMT-205ENST00000569518 ST8SIA3O43173 380 aa18.55■□□□□ 0.56
VCPKMT-205ENST00000569518 RAMP3O60896 148 aa18.55■□□□□ 0.56
VCPKMT-205ENST00000569518 ATP6V1G1O75348 118 aa18.55■□□□□ 0.56
VCPKMT-205ENST00000569518 IFNA7P01567 189 aa18.55■□□□□ 0.56
VCPKMT-205ENST00000569518 SMCO1Q147U7 214 aa18.55■□□□□ 0.56
VCPKMT-205ENST00000569518 SLC51BQ86UW2 128 aa18.55■□□□□ 0.56
VCPKMT-205ENST00000569518 GPR146Q96CH1 333 aa18.55■□□□□ 0.56
VCPKMT-205ENST00000569518 ZNF714Q96N38 554 aa18.55■□□□□ 0.56
VCPKMT-205ENST00000569518 RCL1Q9Y2P8 373 aaKnown RBP18.55■□□□□ 0.56
VCPKMT-205ENST00000569518 KANTRA0A1W2PQU2 76 aa18.54■□□□□ 0.56
VCPKMT-205ENST00000569518 C17orf98A8MV24 154 aa18.54■□□□□ 0.56
VCPKMT-205ENST00000569518 PITX3O75364 302 aa18.54■□□□□ 0.56
VCPKMT-205ENST00000569518 RLN2P04090 185 aa18.54■□□□□ 0.56
VCPKMT-205ENST00000569518 RNF224P0DH78 156 aa18.54■□□□□ 0.56
VCPKMT-205ENST00000569518 THOC7Q6I9Y2 204 aaKnown RBP18.54■□□□□ 0.56
VCPKMT-205ENST00000569518 HEPN1Q6WQI6 88 aa18.54■□□□□ 0.56
VCPKMT-205ENST00000569518 TCTEX1D2Q8WW35 142 aa18.54■□□□□ 0.56
VCPKMT-205ENST00000569518 H1FXQ92522 213 aaKnown RBP18.54■□□□□ 0.56
VCPKMT-205ENST00000569518 ZNF462Q96JM2 2506 aa18.53■□□□□ 0.56
VCPKMT-205ENST00000569518 A0A1B0GU03 582 aa18.53■□□□□ 0.56
VCPKMT-205ENST00000569518 DAOP14920 347 aa18.53■□□□□ 0.56
VCPKMT-205ENST00000569518 CCL3L1P16619 93 aa18.53■□□□□ 0.56
VCPKMT-205ENST00000569518 NFYBP25208 207 aa18.53■□□□□ 0.56
VCPKMT-205ENST00000569518 DUTP33316 252 aaKnown RBP18.53■□□□□ 0.56
VCPKMT-205ENST00000569518 LPAR6P43657 344 aa18.53■□□□□ 0.56
VCPKMT-205ENST00000569518 NDUFA5Q16718 116 aa18.53■□□□□ 0.56
VCPKMT-205ENST00000569518 ZNF841Q6ZN19 808 aa18.53■□□□□ 0.56
VCPKMT-205ENST00000569518 C11orf1Q9H5F2 150 aa18.53■□□□□ 0.56
VCPKMT-205ENST00000569518 UBTD1Q9HAC8 227 aa18.53■□□□□ 0.56
VCPKMT-205ENST00000569518 YLPM1P49750 1951 aaKnown RBP18.53■□□□□ 0.56
VCPKMT-205ENST00000569518 HKR1P10072 659 aa18.53■□□□□ 0.56
VCPKMT-205ENST00000569518 DLX6P56179 175 aa18.53■□□□□ 0.56
VCPKMT-205ENST00000569518 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.53■□□□□ 0.56
VCPKMT-205ENST00000569518 DMBX1Q8NFW5 382 aa18.53■□□□□ 0.56
VCPKMT-205ENST00000569518 E5RGE8 158 aa18.52■□□□□ 0.56
VCPKMT-205ENST00000569518 NUP62P37198 522 aaPredicted RBP18.52■□□□□ 0.56
VCPKMT-205ENST00000569518 HTR2BP41595 481 aa18.52■□□□□ 0.56
VCPKMT-205ENST00000569518 NKX2-1P43699 371 aaPredicted RBP18.52■□□□□ 0.56
VCPKMT-205ENST00000569518 LINC00205P59089 165 aa18.52■□□□□ 0.56
VCPKMT-205ENST00000569518 ID3Q02535 119 aa18.52■□□□□ 0.56
VCPKMT-205ENST00000569518 TMEM155Q4W5P6 130 aa18.52■□□□□ 0.56
VCPKMT-205ENST00000569518 RPL39P5Q59GN2 51 aa18.52■□□□□ 0.56
VCPKMT-205ENST00000569518 OR2B11Q5JQS5 317 aa18.52■□□□□ 0.56
VCPKMT-205ENST00000569518 CXorf66Q5JRM2 361 aaPredicted RBP18.52■□□□□ 0.56
VCPKMT-205ENST00000569518 AVPI1Q5T686 147 aa18.52■□□□□ 0.56
VCPKMT-205ENST00000569518 Q6ZRM9 215 aa18.52■□□□□ 0.56
VCPKMT-205ENST00000569518 C1orf229Q6ZS94 237 aaPredicted RBP18.52■□□□□ 0.56
VCPKMT-205ENST00000569518 ODF3L1Q8IXM7 274 aa18.52■□□□□ 0.56
VCPKMT-205ENST00000569518 SPAG16Q8N0X2 631 aa18.52■□□□□ 0.56
VCPKMT-205ENST00000569518 ARPC5LQ9BPX5 153 aa18.52■□□□□ 0.56
VCPKMT-205ENST00000569518 NSG2Q9Y328 171 aa18.52■□□□□ 0.56
VCPKMT-205ENST00000569518 TRBV23-1A0A0A0MS06 115 aa18.51■□□□□ 0.55
VCPKMT-205ENST00000569518 A0A1W2PPE3 182 aa18.51■□□□□ 0.55
VCPKMT-205ENST00000569518 P0C879 139 aa18.51■□□□□ 0.55
VCPKMT-205ENST00000569518 NCR3LG1Q68D85 454 aa18.51■□□□□ 0.55
VCPKMT-205ENST00000569518 SLC25A48Q6ZT89 311 aaKnown RBP18.51■□□□□ 0.55
VCPKMT-205ENST00000569518 UBQLN2Q9UHD9 624 aa18.51■□□□□ 0.55
VCPKMT-205ENST00000569518 MYO18BQ8IUG5 2567 aa18.51■□□□□ 0.55
VCPKMT-205ENST00000569518 GOSR1O95249 250 aa18.51■□□□□ 0.55
VCPKMT-205ENST00000569518 EPHA1P21709 976 aa18.51■□□□□ 0.55
VCPKMT-205ENST00000569518 AKR1C2P52895 323 aa18.51■□□□□ 0.55
VCPKMT-205ENST00000569518 ERVFRD-1P60508 538 aa18.51■□□□□ 0.55
VCPKMT-205ENST00000569518 IZUMO4Q1ZYL8 232 aa18.51■□□□□ 0.55
VCPKMT-205ENST00000569518 ZNF251Q9BRH9 671 aa18.51■□□□□ 0.55
VCPKMT-205ENST00000569518 PLEKHA2Q9HB19 425 aa18.51■□□□□ 0.55
VCPKMT-205ENST00000569518 SAA2-SAA4A0A096LPE2 208 aa18.5■□□□□ 0.55
VCPKMT-205ENST00000569518 KIAA1324LA8MWY0 1029 aaPredicted RBP18.5■□□□□ 0.55
VCPKMT-205ENST00000569518 M0R1X1 148 aa18.5■□□□□ 0.55
VCPKMT-205ENST00000569518 S1PR2O95136 353 aa18.5■□□□□ 0.55
VCPKMT-205ENST00000569518 SAA2P0DJI9 122 aaPredicted RBP18.5■□□□□ 0.55
VCPKMT-205ENST00000569518 RPL12P30050 165 aaKnown RBP18.5■□□□□ 0.55
VCPKMT-205ENST00000569518 UBA52P62987 128 aaKnown RBP18.5■□□□□ 0.55
VCPKMT-205ENST00000569518 SLC7A5P1Q8MH63 180 aa18.5■□□□□ 0.55
VCPKMT-205ENST00000569518 RALYQ9UKM9 306 aaKnown RBP18.5■□□□□ 0.55
VCPKMT-205ENST00000569518 MMP24Q9Y5R2 645 aa18.5■□□□□ 0.55
VCPKMT-205ENST00000569518 RAB29O14966 203 aa18.49■□□□□ 0.55
VCPKMT-205ENST00000569518 SPDEFO95238 335 aa18.49■□□□□ 0.55
VCPKMT-205ENST00000569518 ZNF816Q0VGE8 651 aaPredicted RBP18.49■□□□□ 0.55
VCPKMT-205ENST00000569518 RNASE11Q8TAA1 199 aaKnown RBP18.49■□□□□ 0.55
VCPKMT-205ENST00000569518 ST8SIA2Q92186 375 aa18.49■□□□□ 0.55
VCPKMT-205ENST00000569518 CHODLQ9H9P2 273 aa18.49■□□□□ 0.55
VCPKMT-205ENST00000569518 CYTL1Q9NRR1 136 aa18.49■□□□□ 0.55
VCPKMT-205ENST00000569518 CACNG5Q9UF02 275 aa18.49■□□□□ 0.55
VCPKMT-205ENST00000569518 CDKN1AP38936 164 aa18.49■□□□□ 0.55
VCPKMT-205ENST00000569518 P2RY1P47900 373 aa18.49■□□□□ 0.55
VCPKMT-205ENST00000569518 GNG10P50151 68 aa18.49■□□□□ 0.55
VCPKMT-205ENST00000569518 POLR2GP62487 172 aaKnown RBP eCLIP18.49■□□□□ 0.55
VCPKMT-205ENST00000569518 CD300LFQ8TDQ1 290 aa18.49■□□□□ 0.55
VCPKMT-205ENST00000569518 DDB2Q92466 427 aa18.49■□□□□ 0.55
VCPKMT-205ENST00000569518 RAB1CQ92928 201 aa18.49■□□□□ 0.55
VCPKMT-205ENST00000569518 TIMD4Q96H15 378 aa18.49■□□□□ 0.55
VCPKMT-205ENST00000569518 ITGB1BP2Q9UKP3 347 aa18.49■□□□□ 0.55
VCPKMT-205ENST00000569518 KLF2Q9Y5W3 355 aaPredicted RBP18.49■□□□□ 0.55
VCPKMT-205ENST00000569518 DOCK11Q5JSL3 2073 aa18.48■□□□□ 0.55
VCPKMT-205ENST00000569518 F5H0A9 414 aaPredicted RBP18.48■□□□□ 0.55
VCPKMT-205ENST00000569518 GPR37O15354 613 aa18.48■□□□□ 0.55
VCPKMT-205ENST00000569518 PPIHO43447 177 aaKnown RBP18.48■□□□□ 0.55
VCPKMT-205ENST00000569518 ZNF471Q9BX82 626 aaPredicted RBP18.48■□□□□ 0.55
VCPKMT-205ENST00000569518 COA4Q9NYJ1 87 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms