RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 ZNF260Q3ZCT1 412 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 NHLRC3Q5JS37 347 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 FAM131AQ6UXB0 335 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 C17orf107Q6ZR85 190 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 SNX29P2Q8IUI4 249 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 Q8IYB0 196 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 FAM216BQ8N7L0 139 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 SUMF2Q8NBJ7 301 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 ZNRF1Q8ND25 227 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 OR4S1Q8NGB4 309 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 PLPPR1Q8TBJ4 325 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 RAB39BQ96DA2 213 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 MRPS24Q96EL2 167 aaKnown RBP6.48□□□□□ -1.37
CDH11-216ENST00000569128 LURAP1Q96LR2 239 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 GAFA1Q96PS6 74 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 SDHCQ99643 169 aaPredicted RBP6.48□□□□□ -1.37
CDH11-216ENST00000569128 HDHD3Q9BSH5 251 aaPredicted RBP6.48□□□□□ -1.37
CDH11-216ENST00000569128 CHST6Q9GZX3 395 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 VCX2Q9H322 139 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 CTSZQ9UBR2 303 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 OR2W1Q9Y3N9 320 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 V9GYH0 126 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 SPG11Q96JI7 2443 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 PTPN13Q12923 2485 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 IGHV4-30-2A0A087WSY4 118 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 TRAV39A0A0B4J263 110 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 TRAV38-1A0A0B4J264 116 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 MEX3AA1L020 520 aaKnown RBP6.47□□□□□ -1.37
CDH11-216ENST00000569128 ISPDA4D126 451 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 J3QRK9 145 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 CCL24O00175 119 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 MFNGO00587 321 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 ZNF737O75373 536 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 PAX1P15863 534 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 MUC1P15941 1255 aaPredicted RBP6.47□□□□□ -1.37
CDH11-216ENST00000569128 FUT3P21217 361 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 GPR6P46095 362 aaPredicted RBP6.47□□□□□ -1.37
CDH11-216ENST00000569128 PDLIM4P50479 330 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 TMEM33P57088 247 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 IL18Q14116 193 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 ZNF79Q15937 498 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 MICBQ29980 383 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 MPV17LQ2QL34 196 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 DEFB113Q30KQ7 82 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 PAN3Q58A45 887 aaKnown RBP6.47□□□□□ -1.37
CDH11-216ENST00000569128 TMEM69Q5SWH9 247 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 TPRX1Q8N7U7 411 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 NUDCD2Q8WVJ2 157 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 RAB3CQ96E17 227 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 NEDD4LQ96PU5 975 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 DCTN5Q9BTE1 182 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 SHARPINQ9H0F6 387 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 PPA2Q9H2U2 334 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 AUNIPQ9H7T9 357 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 RHOFQ9HBH0 211 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 DIABLOQ9NR28 239 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 PLEKHJ1Q9NW61 149 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 AK3Q9UIJ7 227 aa6.47□□□□□ -1.37
CDH11-216ENST00000569128 CEACAM18A8MTB9 384 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 H0Y8G0 127 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 HIST1H1DP16402 221 aaKnown RBP6.46□□□□□ -1.38
CDH11-216ENST00000569128 MDH2P40926 338 aaKnown RBP6.46□□□□□ -1.38
CDH11-216ENST00000569128 ETV6P41212 452 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 RANBP1P43487 201 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 ATXN7L3Q14CW9 347 aaPredicted RBP6.46□□□□□ -1.38
CDH11-216ENST00000569128 PYDC2Q56P42 97 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 SPIN3Q5JUX0 258 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 FIP1L1Q6UN15 594 aaKnown RBP6.46□□□□□ -1.38
CDH11-216ENST00000569128 ERASQ7Z444 233 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 PRR26Q8N8Z3 221 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 ASCC1Q8N9N2 400 aaKnown RBP6.46□□□□□ -1.38
CDH11-216ENST00000569128 NEK7Q8TDX7 302 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 C10orf105Q8TEF2 133 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 MAFIPQ8WZ33 124 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 RAB1CQ92928 201 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 SDSLQ96GA7 329 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 COQ2Q96H96 371 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 TSC22D3Q99576 134 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 BPESC1Q9GZL8 116 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 SRRQ9GZT4 340 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 ZNF665Q9H7R5 613 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 MYOZ1Q9NP98 299 aaPredicted RBP6.46□□□□□ -1.38
CDH11-216ENST00000569128 GLS2Q9UI32 602 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 ZNF230Q9UIE0 474 aaPredicted RBP6.46□□□□□ -1.38
CDH11-216ENST00000569128 POLQO75417 2590 aa6.46□□□□□ -1.38
CDH11-216ENST00000569128 ARID1AO14497 2285 aa6.45□□□□□ -1.38
CDH11-216ENST00000569128 HECTD1Q9ULT8 2610 aa6.45□□□□□ -1.38
CDH11-216ENST00000569128 IGKV1D-8A0A087WSZ0 117 aa6.45□□□□□ -1.38
CDH11-216ENST00000569128 A0A0A6YYH2 397 aa6.45□□□□□ -1.38
CDH11-216ENST00000569128 IGHV4-61A0A0C4DH41 118 aa6.45□□□□□ -1.38
CDH11-216ENST00000569128 A6NJ64 397 aa6.45□□□□□ -1.38
CDH11-216ENST00000569128 MCRIP1C9JLW8 97 aa6.45□□□□□ -1.38
CDH11-216ENST00000569128 K7N7A8 449 aa6.45□□□□□ -1.38
CDH11-216ENST00000569128 SIGLEC5O15389 551 aa6.45□□□□□ -1.38
CDH11-216ENST00000569128 MELTFP08582 738 aa6.45□□□□□ -1.38
CDH11-216ENST00000569128 WNT2P09544 360 aa6.45□□□□□ -1.38
CDH11-216ENST00000569128 CD3GP09693 182 aa6.45□□□□□ -1.38
CDH11-216ENST00000569128 GIFP27352 417 aa6.45□□□□□ -1.38
CDH11-216ENST00000569128 HOXD3P31249 432 aaPredicted RBP6.45□□□□□ -1.38
CDH11-216ENST00000569128 IL2RGP31785 369 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms