RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 GJC3Q8NFK1 279 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 DMBX1Q8NFW5 382 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 OR56B2PQ8NGI1 322 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 OR51A7Q8NH64 312 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 RGP1Q92546 391 aaPredicted RBP8.74□□□□□ -1.01
CDH3-208ENST00000569036 TSNAXQ99598 290 aaKnown RBP8.74□□□□□ -1.01
CDH3-208ENST00000569036 SEC11CQ9BY50 192 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 TLNRD1Q9H1K6 362 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 LINC00527Q9UJ94 153 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 LHFPL6Q9Y693 200 aa8.74□□□□□ -1.01
CDH3-208ENST00000569036 TRBV6-7A0A0A0MS04 114 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 TRAV14DV4A0A0A6YYC5 116 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 A0A0B4J2A0 478 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 OR5H14A6NHG9 310 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 OR4C45A6NMZ5 311 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 OR2AT4A6NND4 320 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 F8VVB4 439 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 F8VWA3 439 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 F8W036 122 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 CD14P08571 375 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 TPT1P13693 172 aaKnown RBP8.73□□□□□ -1.01
CDH3-208ENST00000569036 PVALBP20472 110 aaPredicted RBP8.73□□□□□ -1.01
CDH3-208ENST00000569036 POU3F4P49335 361 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 HCCSP53701 268 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 DLX6P56179 175 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 SLC35B1P78383 322 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 DEFA5Q01523 94 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 HMGN3Q15651 99 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 SNAI3Q3KNW1 292 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 LINC01590Q5TEZ4 76 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 MINOS1Q5TGZ0 78 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 CORO6Q6QEF8 472 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 LYPD6Q86Y78 171 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 NKAIN3Q8N8D7 197 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 LRRC75AQ8NAA5 344 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 CYB561A3Q8NBI2 242 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 INO80EQ8NBZ0 244 aaPredicted RBP8.73□□□□□ -1.01
CDH3-208ENST00000569036 THAP6Q8TBB0 222 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 PCNPQ8WW12 178 aaKnown RBP8.73□□□□□ -1.01
CDH3-208ENST00000569036 SAT2Q96F10 170 aaPredicted RBP8.73□□□□□ -1.01
CDH3-208ENST00000569036 NABP2Q9BQ15 211 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 PDCD1LG2Q9BQ51 273 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 CKLFQ9UBR5 152 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 SHPKQ9UHJ6 478 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 IER3IP1Q9Y5U9 82 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 MINOS1-NBL1R4GNA1 71 aa8.73□□□□□ -1.01
CDH3-208ENST00000569036 DMBT1Q9UGM3 2413 aaPredicted RBP8.72□□□□□ -1.01
CDH3-208ENST00000569036 DNAH17Q9UFH2 4485 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 TMEM272A0A1B0GTI8 110 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 METTL21EPA6NDL7 271 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 OR6C68A6NDL8 312 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 C17orf98A8MV24 154 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 H3BSH0 61 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 M0QZK8 103 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 KDM4BO94953 1096 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 SPDEFO95238 335 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 RAB3DO95716 219 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 CD2P06729 351 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 CLUP10909 449 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 CD34P28906 385 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 CDX1P47902 265 aaPredicted RBP8.72□□□□□ -1.01
CDH3-208ENST00000569036 CX3CR1P49238 355 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 LY6G6FQ5SQ64 297 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 GLYATL3Q5SZD4 288 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 FAM71E2Q8N5Q1 922 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 DRAM1Q8N682 238 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 BPIFCQ8NFQ6 507 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 OR4K13Q8NH42 304 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 RNF141Q8WVD5 230 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 PHB2Q99623 299 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 COA4Q9NYJ1 87 aa8.72□□□□□ -1.01
CDH3-208ENST00000569036 COA3Q9Y2R0 106 aaPredicted RBP8.72□□□□□ -1.01
CDH3-208ENST00000569036 TEX13DA0A0J9YY54 714 aaPredicted RBP8.71□□□□□ -1.02
CDH3-208ENST00000569036 A0A1B0GVY2 172 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 SERPINE3A8MV23 424 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 SAP30O75446 220 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 CYB5AP00167 134 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 RENP00797 406 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 ZNF823P16415 610 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 MEOX2P50222 304 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 PRKXP51817 358 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 NANOS3P60323 173 aaKnown RBP8.71□□□□□ -1.02
CDH3-208ENST00000569036 KCNMB1Q16558 191 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 MEP1BQ16820 701 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 ACTBL2Q562R1 376 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 MESTQ5EB52 335 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 ASPHD1Q5U4P2 390 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 ACP7Q6ZNF0 438 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 LYG2Q86SG7 212 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 SLC25A42Q86VD7 318 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 SGPP2Q8IWX5 399 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 ZNF676Q8N7Q3 588 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 OR51S1Q8NGJ8 323 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 OR2G2Q8NGZ5 317 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 MITD1Q8WV92 249 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 RNF166Q96A37 237 aaPredicted RBP8.71□□□□□ -1.02
CDH3-208ENST00000569036 FAM3DQ96BQ1 224 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 WDR89Q96FK6 387 aaPredicted RBP8.71□□□□□ -1.02
CDH3-208ENST00000569036 NMES1Q9C002 83 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 MRM2Q9UI43 246 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms