RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 METTL1Q9UBP6 276 aaKnown RBP11.29□□□□□ -0.6
USB1-214ENST00000568848 JPT1Q9UK76 154 aa11.29□□□□□ -0.6
USB1-214ENST00000568848 H0YJW9 148 aa11.28□□□□□ -0.6
USB1-214ENST00000568848 H7C2Y5 167 aa11.28□□□□□ -0.6
USB1-214ENST00000568848 GPX5O75715 221 aa11.28□□□□□ -0.6
USB1-214ENST00000568848 CRTAPO75718 401 aaPredicted RBP11.28□□□□□ -0.6
USB1-214ENST00000568848 RGS11O94810 467 aa11.28□□□□□ -0.6
USB1-214ENST00000568848 CDK1P06493 297 aa11.28□□□□□ -0.6
USB1-214ENST00000568848 MGMTP16455 207 aa11.28□□□□□ -0.6
USB1-214ENST00000568848 TAS2R43P59537 309 aa11.28□□□□□ -0.6
USB1-214ENST00000568848 PJVKQ0ZLH3 352 aa11.28□□□□□ -0.6
USB1-214ENST00000568848 INSL4Q14641 139 aa11.28□□□□□ -0.6
USB1-214ENST00000568848 RNF150Q9ULK6 438 aa11.28□□□□□ -0.6
USB1-214ENST00000568848 ERGIC3Q9Y282 383 aa11.28□□□□□ -0.6
USB1-214ENST00000568848 RBMY1BA6NDE4 496 aaKnown RBP11.27□□□□□ -0.61
USB1-214ENST00000568848 RBMY1EA6NEQ0 496 aaKnown RBP11.27□□□□□ -0.61
USB1-214ENST00000568848 SC5DO75845 299 aa11.27□□□□□ -0.61
USB1-214ENST00000568848 IGKV1-16P04430 117 aa11.27□□□□□ -0.61
USB1-214ENST00000568848 CSN3P07498 182 aa11.27□□□□□ -0.61
USB1-214ENST00000568848 GSTP1P09211 210 aaKnown RBP11.27□□□□□ -0.61
USB1-214ENST00000568848 RBMY1DP0C7P1 496 aaKnown RBP11.27□□□□□ -0.61
USB1-214ENST00000568848 KLF5Q13887 457 aaPredicted RBP11.27□□□□□ -0.61
USB1-214ENST00000568848 PSG5Q15238 335 aa11.27□□□□□ -0.61
USB1-214ENST00000568848 CD200R1LQ6Q8B3 271 aa11.27□□□□□ -0.61
USB1-214ENST00000568848 DEFB125Q8N687 156 aa11.27□□□□□ -0.61
USB1-214ENST00000568848 OR2AK2Q8NG84 335 aa11.27□□□□□ -0.61
USB1-214ENST00000568848 OR9G4Q8NGQ1 327 aa11.27□□□□□ -0.61
USB1-214ENST00000568848 Q96M66 194 aa11.27□□□□□ -0.61
USB1-214ENST00000568848 DERL3Q96Q80 235 aa11.27□□□□□ -0.61
USB1-214ENST00000568848 HDHD3Q9BSH5 251 aaPredicted RBP11.27□□□□□ -0.61
USB1-214ENST00000568848 PAK1IP1Q9NWT1 392 aaPredicted RBP11.27□□□□□ -0.61
USB1-214ENST00000568848 KCNIP1Q9NZI2 227 aa11.27□□□□□ -0.61
USB1-214ENST00000568848 OR1A1Q9P1Q5 309 aa11.27□□□□□ -0.61
USB1-214ENST00000568848 CEPT1Q9Y6K0 416 aa11.27□□□□□ -0.61
USB1-214ENST00000568848 YPEL1O60688 119 aa11.26□□□□□ -0.61
USB1-214ENST00000568848 PROP1O75360 226 aa11.26□□□□□ -0.61
USB1-214ENST00000568848 IFNA6P05013 189 aa11.26□□□□□ -0.61
USB1-214ENST00000568848 CD7P09564 240 aa11.26□□□□□ -0.61
USB1-214ENST00000568848 FSTP19883 344 aa11.26□□□□□ -0.61
USB1-214ENST00000568848 HMGN3Q15651 99 aa11.26□□□□□ -0.61
USB1-214ENST00000568848 STEAP3Q658P3 488 aa11.26□□□□□ -0.61
USB1-214ENST00000568848 C6orf201Q7Z4U5 140 aa11.26□□□□□ -0.61
USB1-214ENST00000568848 SETD6Q8TBK2 473 aa11.26□□□□□ -0.61
USB1-214ENST00000568848 YPEL2Q96QA6 119 aa11.26□□□□□ -0.61
USB1-214ENST00000568848 FAAP24Q9BTP7 215 aa11.26□□□□□ -0.61
USB1-214ENST00000568848 CKLFQ9UBR5 152 aa11.26□□□□□ -0.61
USB1-214ENST00000568848 SLC25A17O43808 307 aa11.25□□□□□ -0.61
USB1-214ENST00000568848 ZNF780AO75290 641 aaPredicted RBP11.25□□□□□ -0.61
USB1-214ENST00000568848 CD1AP06126 327 aa11.25□□□□□ -0.61
USB1-214ENST00000568848 FUT3P21217 361 aa11.25□□□□□ -0.61
USB1-214ENST00000568848 CD81P60033 236 aa11.25□□□□□ -0.61
USB1-214ENST00000568848 FXYD3Q14802 87 aa11.25□□□□□ -0.61
USB1-214ENST00000568848 POC5Q8NA72 575 aa11.25□□□□□ -0.61
USB1-214ENST00000568848 LINC00476Q8WZB0 136 aa11.25□□□□□ -0.61
USB1-214ENST00000568848 NICN1Q9BSH3 213 aa11.25□□□□□ -0.61
USB1-214ENST00000568848 SPACA1Q9HBV2 294 aa11.25□□□□□ -0.61
USB1-214ENST00000568848 SCN3BQ9NY72 215 aa11.25□□□□□ -0.61
USB1-214ENST00000568848 PCLOQ9Y6V0 5065 aa11.24□□□□□ -0.61
USB1-214ENST00000568848 C13orf42A0A1B0GVH6 325 aa11.24□□□□□ -0.61
USB1-214ENST00000568848 PDCD6O75340 191 aa11.24□□□□□ -0.61
USB1-214ENST00000568848 LY6G6CO95867 125 aa11.24□□□□□ -0.61
USB1-214ENST00000568848 HTD2P86397 168 aa11.24□□□□□ -0.61
USB1-214ENST00000568848 EWSR1Q01844 656 aaKnown RBP eCLIP11.24□□□□□ -0.61
USB1-214ENST00000568848 TMEM267Q0VDI3 215 aaPredicted RBP11.24□□□□□ -0.61
USB1-214ENST00000568848 PMS2P11Q13670 270 aa11.24□□□□□ -0.61
USB1-214ENST00000568848 TMEM30BQ3MIR4 351 aa11.24□□□□□ -0.61
USB1-214ENST00000568848 ACSM3Q53FZ2 586 aa11.24□□□□□ -0.61
USB1-214ENST00000568848 AKIRIN2Q53H80 203 aa11.24□□□□□ -0.61
USB1-214ENST00000568848 TRAT1Q6PIZ9 186 aa11.24□□□□□ -0.61
USB1-214ENST00000568848 LINC00322Q6ZN03 302 aaPredicted RBP11.24□□□□□ -0.61
USB1-214ENST00000568848 ZNF383Q8NA42 475 aa11.24□□□□□ -0.61
USB1-214ENST00000568848 GALMQ96C23 342 aa11.24□□□□□ -0.61
USB1-214ENST00000568848 MND1Q9BWT6 205 aa11.24□□□□□ -0.61
USB1-214ENST00000568848 RANGRFQ9HD47 186 aaPredicted RBP11.24□□□□□ -0.61
USB1-214ENST00000568848 LSM2Q9Y333 95 aaKnown RBP11.24□□□□□ -0.61
USB1-214ENST00000568848 WASHC3Q9Y3C0 194 aa11.24□□□□□ -0.61
USB1-214ENST00000568848 PRH1P02810 166 aa11.23□□□□□ -0.61
USB1-214ENST00000568848 IRF3Q14653 427 aa11.23□□□□□ -0.61
USB1-214ENST00000568848 SPHARQ15513 63 aa11.23□□□□□ -0.61
USB1-214ENST00000568848 MED22Q15528 200 aa11.23□□□□□ -0.61
USB1-214ENST00000568848 CD300EQ496F6 205 aaPredicted RBP11.23□□□□□ -0.61
USB1-214ENST00000568848 RNLSQ5VYX0 342 aa11.23□□□□□ -0.61
USB1-214ENST00000568848 PYHIN1Q6K0P9 492 aa11.23□□□□□ -0.61
USB1-214ENST00000568848 GTSCR1Q86UQ5 136 aa11.23□□□□□ -0.61
USB1-214ENST00000568848 SVOPQ8N4V2 548 aa11.23□□□□□ -0.61
USB1-214ENST00000568848 TCTEX1D1Q8N7M0 179 aa11.23□□□□□ -0.61
USB1-214ENST00000568848 SLC23A1Q9UHI7 598 aa11.23□□□□□ -0.61
USB1-214ENST00000568848 HECTD4Q9Y4D8 3996 aa11.23□□□□□ -0.61
USB1-214ENST00000568848 A0A0A6YYD4 124 aa11.22□□□□□ -0.61
USB1-214ENST00000568848 TFAP2AP05549 437 aa11.22□□□□□ -0.61
USB1-214ENST00000568848 CPEP16870 476 aa11.22□□□□□ -0.61
USB1-214ENST00000568848 HTR2CP28335 458 aa11.22□□□□□ -0.61
USB1-214ENST00000568848 RPS16P62249 146 aaKnown RBP11.22□□□□□ -0.61
USB1-214ENST00000568848 GPR176Q14439 515 aa11.22□□□□□ -0.61
USB1-214ENST00000568848 ZNF562Q6V9R5 426 aa11.22□□□□□ -0.61
USB1-214ENST00000568848 RPP25LQ8N5L8 163 aaKnown RBP11.22□□□□□ -0.61
USB1-214ENST00000568848 BVESQ8NE79 360 aa11.22□□□□□ -0.61
USB1-214ENST00000568848 OR5AN1Q8NGI8 311 aa11.22□□□□□ -0.61
USB1-214ENST00000568848 NEURL2Q9BR09 285 aa11.22□□□□□ -0.61
USB1-214ENST00000568848 C11orf54Q9H0W9 315 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms