RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 DYNC1I1O14576 645 aa8.92□□□□□ -0.98
GTF3C1-209ENST00000568569 AIREO43918 545 aa8.92□□□□□ -0.98
GTF3C1-209ENST00000568569 CRTAPO75718 401 aaPredicted RBP8.92□□□□□ -0.98
GTF3C1-209ENST00000568569 BAG2O95816 211 aa8.92□□□□□ -0.98
GTF3C1-209ENST00000568569 TRBV12-3P01733 135 aa8.92□□□□□ -0.98
GTF3C1-209ENST00000568569 CD7P09564 240 aa8.92□□□□□ -0.98
GTF3C1-209ENST00000568569 CPEP16870 476 aa8.92□□□□□ -0.98
GTF3C1-209ENST00000568569 MECP2P51608 486 aaKnown RBP8.92□□□□□ -0.98
GTF3C1-209ENST00000568569 CD300EQ496F6 205 aaPredicted RBP8.92□□□□□ -0.98
GTF3C1-209ENST00000568569 DEFB125Q8N687 156 aa8.92□□□□□ -0.98
GTF3C1-209ENST00000568569 BVESQ8NE79 360 aa8.92□□□□□ -0.98
GTF3C1-209ENST00000568569 SMIM19Q96E16 107 aa8.92□□□□□ -0.98
GTF3C1-209ENST00000568569 USMG5Q96IX5 58 aa8.92□□□□□ -0.98
GTF3C1-209ENST00000568569 CYYR1Q96J86 154 aa8.92□□□□□ -0.98
GTF3C1-209ENST00000568569 TMEM68Q96MH6 324 aa8.92□□□□□ -0.98
GTF3C1-209ENST00000568569 TINAGL1Q9GZM7 467 aaPredicted RBP8.92□□□□□ -0.98
GTF3C1-209ENST00000568569 TRBV5-5A0A0J9YX44 114 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 NUPR2A6NF83 97 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 OR11H12B2RN74 326 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 EI24O14681 340 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 ITGB1BP1O14713 200 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 IGKV1-16P04430 117 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 LIMS3P0CW19 117 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 LIMS4P0CW20 117 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 SNRPBP14678 240 aaKnown RBP8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 FSTP19883 344 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 LGALS7P47929 136 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 RPS16P62249 146 aaKnown RBP8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 DYRK1AQ13627 763 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 ZIK1Q3SY52 487 aaPredicted RBP8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 Q499Y3 187 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 C1orf146Q5VVC0 180 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 CDH26Q8IXH8 852 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 OR13C5Q8NGS8 318 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 DYNLRB2Q8TF09 96 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 SNAPC3Q92966 411 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 ABHD14BQ96IU4 210 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 WFDC10AQ9H1F0 79 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 MRPS18AQ9NVS2 196 aaKnown RBP8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 FAM53CQ9NYF3 392 aa8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 RPL36Q9Y3U8 105 aaKnown RBP8.91□□□□□ -0.98
GTF3C1-209ENST00000568569 H3BNX3 289 aa8.9□□□□□ -0.98
GTF3C1-209ENST00000568569 CAPGP40121 348 aa8.9□□□□□ -0.98
GTF3C1-209ENST00000568569 SSBP2P81877 361 aaPredicted RBP8.9□□□□□ -0.98
GTF3C1-209ENST00000568569 DEFA5Q01523 94 aa8.9□□□□□ -0.98
GTF3C1-209ENST00000568569 PMS2P11Q13670 270 aa8.9□□□□□ -0.98
GTF3C1-209ENST00000568569 YIF1BQ5BJH7 314 aa8.9□□□□□ -0.98
GTF3C1-209ENST00000568569 TMPRSS11AQ6ZMR5 421 aa8.9□□□□□ -0.98
GTF3C1-209ENST00000568569 PDPNQ86YL7 162 aa8.9□□□□□ -0.98
GTF3C1-209ENST00000568569 SVOPQ8N4V2 548 aa8.9□□□□□ -0.98
GTF3C1-209ENST00000568569 DRAXINQ8NBI3 349 aaPredicted RBP8.9□□□□□ -0.98
GTF3C1-209ENST00000568569 RHOXF1Q8NHV9 184 aa8.9□□□□□ -0.98
GTF3C1-209ENST00000568569 EDARADDQ8WWZ3 215 aa8.9□□□□□ -0.98
GTF3C1-209ENST00000568569 FAM46BQ96A09 425 aa8.9□□□□□ -0.98
GTF3C1-209ENST00000568569 NEDD4LQ96PU5 975 aa8.9□□□□□ -0.98
GTF3C1-209ENST00000568569 AGMATQ9BSE5 352 aa8.9□□□□□ -0.98
GTF3C1-209ENST00000568569 PARP12Q9H0J9 701 aaKnown RBP8.9□□□□□ -0.98
GTF3C1-209ENST00000568569 PCLOQ9Y6V0 5065 aa8.9□□□□□ -0.98
GTF3C1-209ENST00000568569 ZNF785A8K8V0 405 aa8.89□□□□□ -0.99
GTF3C1-209ENST00000568569 OGG1O15527 345 aa8.89□□□□□ -0.99
GTF3C1-209ENST00000568569 APOA2P02652 100 aa8.89□□□□□ -0.99
GTF3C1-209ENST00000568569 OR2G6Q5TZ20 316 aa8.89□□□□□ -0.99
GTF3C1-209ENST00000568569 SULT4A1Q9BR01 284 aa8.89□□□□□ -0.99
GTF3C1-209ENST00000568569 BABAM2Q9NXR7 383 aa8.89□□□□□ -0.99
GTF3C1-209ENST00000568569 COA4Q9NYJ1 87 aa8.89□□□□□ -0.99
GTF3C1-209ENST00000568569 GHRLQ9UBU3 117 aa8.89□□□□□ -0.99
GTF3C1-209ENST00000568569 HECTD4Q9Y4D8 3996 aa8.88□□□□□ -0.99
GTF3C1-209ENST00000568569 TRBV5-7A0A0A0MS05 114 aa8.88□□□□□ -0.99
GTF3C1-209ENST00000568569 ETV1P50549 477 aa8.88□□□□□ -0.99
GTF3C1-209ENST00000568569 RPS11P62280 158 aaKnown RBP eCLIP8.88□□□□□ -0.99
GTF3C1-209ENST00000568569 GUCA2BQ16661 112 aa8.88□□□□□ -0.99
GTF3C1-209ENST00000568569 DEFB114Q30KQ6 69 aa8.88□□□□□ -0.99
GTF3C1-209ENST00000568569 MOB1BQ7L9L4 216 aa8.88□□□□□ -0.99
GTF3C1-209ENST00000568569 RPP25LQ8N5L8 163 aaKnown RBP8.88□□□□□ -0.99
GTF3C1-209ENST00000568569 NKAIN3Q8N8D7 197 aa8.88□□□□□ -0.99
GTF3C1-209ENST00000568569 ZNF383Q8NA42 475 aa8.88□□□□□ -0.99
GTF3C1-209ENST00000568569 KCTD12Q96CX2 325 aaKnown RBP8.88□□□□□ -0.99
GTF3C1-209ENST00000568569 UQCC2Q9BRT2 126 aa8.88□□□□□ -0.99
GTF3C1-209ENST00000568569 CHMP1AQ9HD42 196 aaPredicted RBP8.88□□□□□ -0.99
GTF3C1-209ENST00000568569 FGF20Q9NP95 211 aaPredicted RBP8.88□□□□□ -0.99
GTF3C1-209ENST00000568569 ZC4H2Q9NQZ6 224 aa8.88□□□□□ -0.99
GTF3C1-209ENST00000568569 A0A1W2PPK0 400 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 BMPR1BO00238 502 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 PROP1O75360 226 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 NAPSAO96009 420 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 ZBTB25P24278 435 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 DCKP27707 260 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 CEACAM6P40199 344 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 LINC00205P59089 165 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 PJVKQ0ZLH3 352 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 ZNF880Q6PDB4 577 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 CEMP1Q6PRD7 247 aaPredicted RBP8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 SLC16A13Q7RTY0 426 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 C6orf201Q7Z4U5 140 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 SETD6Q8TBK2 473 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 PTX4Q96A99 478 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 PGLYRP3Q96LB9 341 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 SLC29A1Q99808 456 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 OVOL2Q9BRP0 275 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 FAAP24Q9BTP7 215 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms