RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 F2RL1P55085 397 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 LINC00205P59089 165 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 TAS2R20P59543 309 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 FAM131AQ6UXB0 335 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 GLDNQ6ZMI3 551 aaPredicted RBP7.77□□□□□ -1.17
CLK3-220ENST00000567992 HOGA1Q86XE5 327 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 FAM71E2Q8N5Q1 922 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 GVQW1Q8N7I0 195 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 Q8N9W7 124 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 OR10J5Q8NHC4 309 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 ACOT12Q8WYK0 555 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 SNAPC3Q92966 411 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 BORCS5Q969J3 196 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 PHF21AQ96BD5 680 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 S100A16Q96FQ6 103 aaKnown RBP7.77□□□□□ -1.17
CLK3-220ENST00000567992 CMTM3Q96MX0 182 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 DCUN1D5Q9BTE7 237 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 ST6GALNAC5Q9BVH7 336 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 GHITMQ9H3K2 345 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 DIABLOQ9NR28 239 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 COMMD3Q9UBI1 195 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 ANXA10Q9UJ72 324 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 ANAPC10Q9UM13 185 aa7.77□□□□□ -1.17
CLK3-220ENST00000567992 TET2Q6N021 2002 aaPredicted RBP7.76□□□□□ -1.17
CLK3-220ENST00000567992 DNAH3Q8TD57 4116 aa7.76□□□□□ -1.17
CLK3-220ENST00000567992 H0YJW9 148 aa7.76□□□□□ -1.17
CLK3-220ENST00000567992 HPGDSO60760 199 aa7.76□□□□□ -1.17
CLK3-220ENST00000567992 HLA-DQB1P01920 261 aa7.76□□□□□ -1.17
CLK3-220ENST00000567992 OR8U9P0C7N5 309 aa7.76□□□□□ -1.17
CLK3-220ENST00000567992 VSIG10L2P0DP72 767 aa7.76□□□□□ -1.17
CLK3-220ENST00000567992 ZNF182P17025 639 aaPredicted RBP7.76□□□□□ -1.17
CLK3-220ENST00000567992 ELK1P19419 428 aa7.76□□□□□ -1.17
CLK3-220ENST00000567992 CNTFRP26992 372 aa7.76□□□□□ -1.17
CLK3-220ENST00000567992 GPR12P47775 334 aa7.76□□□□□ -1.17
CLK3-220ENST00000567992 PRR31Q5SQ13 230 aa7.76□□□□□ -1.17
CLK3-220ENST00000567992 TMEM69Q5SWH9 247 aa7.76□□□□□ -1.17
CLK3-220ENST00000567992 CNIH2Q6PI25 160 aa7.76□□□□□ -1.17
CLK3-220ENST00000567992 ZNF383Q8NA42 475 aa7.76□□□□□ -1.17
CLK3-220ENST00000567992 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.76□□□□□ -1.17
CLK3-220ENST00000567992 OR5AN1Q8NGI8 311 aa7.76□□□□□ -1.17
CLK3-220ENST00000567992 OR8U1Q8NH10 309 aa7.76□□□□□ -1.17
CLK3-220ENST00000567992 S1PR3Q99500 378 aa7.76□□□□□ -1.17
CLK3-220ENST00000567992 OR2D2Q9H210 308 aa7.76□□□□□ -1.17
CLK3-220ENST00000567992 LIN7CQ9NUP9 197 aaKnown RBP7.76□□□□□ -1.17
CLK3-220ENST00000567992 SDHAF2Q9NX18 166 aa7.76□□□□□ -1.17
CLK3-220ENST00000567992 GAB2Q9UQC2 676 aa7.76□□□□□ -1.17
CLK3-220ENST00000567992 WNK1Q9H4A3 2382 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 IGKV1D-13A0A0B4J2D9 117 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 MEIS3P1A6NDR6 274 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 OR5H14A6NHG9 310 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 LINC01548A6NM66 108 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 TUSC2O75896 110 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 IGLV2-14P01704 120 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 IGHG2P01859 326 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 IGKV1-13P0DP09 117 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 CD28P10747 220 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 NFYAP23511 347 aaPredicted RBP7.75□□□□□ -1.17
CLK3-220ENST00000567992 ACTBP60709 375 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 TCTEX1D4Q5JR98 221 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 C9orf152Q5JTZ5 239 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 C10orf99Q6UWK7 81 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 Q6ZNX1 250 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 C11orf44Q8N8P7 122 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 DRAXINQ8NBI3 349 aaPredicted RBP7.75□□□□□ -1.17
CLK3-220ENST00000567992 BEST4Q8NFU0 473 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 OR8H1Q8NGG4 311 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 SGMS2Q8NHU3 365 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 DYNC2LI1Q8TCX1 351 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 AP3S1Q92572 193 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 PPP1R14BQ96C90 147 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 HSPB9Q9BQS6 159 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 GINS4Q9BRT9 223 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 MIXL1Q9H2W2 232 aa7.75□□□□□ -1.17
CLK3-220ENST00000567992 NCBP2LA6PVI3 153 aaKnown RBP7.74□□□□□ -1.17
CLK3-220ENST00000567992 ADARB2-AS1A8MUL3 147 aa7.74□□□□□ -1.17
CLK3-220ENST00000567992 M0R1X1 148 aa7.74□□□□□ -1.17
CLK3-220ENST00000567992 NDUFA3O95167 84 aa7.74□□□□□ -1.17
CLK3-220ENST00000567992 IGKV1-16P04430 117 aa7.74□□□□□ -1.17
CLK3-220ENST00000567992 FCER2P06734 321 aa7.74□□□□□ -1.17
CLK3-220ENST00000567992 CTXN2P0C2S0 81 aa7.74□□□□□ -1.17
CLK3-220ENST00000567992 NAT1P18440 290 aa7.74□□□□□ -1.17
CLK3-220ENST00000567992 CBX5P45973 191 aa7.74□□□□□ -1.17
CLK3-220ENST00000567992 EIF4EBP1Q13541 118 aaPredicted RBP7.74□□□□□ -1.17
CLK3-220ENST00000567992 NPBQ8NG41 125 aa7.74□□□□□ -1.17
CLK3-220ENST00000567992 GPX8Q8TED1 209 aa7.74□□□□□ -1.17
CLK3-220ENST00000567992 DDB2Q92466 427 aa7.74□□□□□ -1.17
CLK3-220ENST00000567992 CCDC59Q9P031 241 aaKnown RBP7.74□□□□□ -1.17
CLK3-220ENST00000567992 ZNF107Q9UII5 783 aaPredicted RBP7.74□□□□□ -1.17
CLK3-220ENST00000567992 ZNF221Q9UK13 617 aa7.74□□□□□ -1.17
CLK3-220ENST00000567992 WASHC3Q9Y3C0 194 aa7.74□□□□□ -1.17
CLK3-220ENST00000567992 OR2W1Q9Y3N9 320 aa7.74□□□□□ -1.17
CLK3-220ENST00000567992 NBR2O15453 112 aa7.73□□□□□ -1.17
CLK3-220ENST00000567992 FBXO24O75426 580 aa7.73□□□□□ -1.17
CLK3-220ENST00000567992 TSPAN15O95858 294 aa7.73□□□□□ -1.17
CLK3-220ENST00000567992 MC5RP33032 325 aa7.73□□□□□ -1.17
CLK3-220ENST00000567992 MMDQ15546 238 aa7.73□□□□□ -1.17
CLK3-220ENST00000567992 ARSJQ5FYB0 599 aaPredicted RBP7.73□□□□□ -1.17
CLK3-220ENST00000567992 ZNF660Q6AZW8 331 aaPredicted RBP7.73□□□□□ -1.17
CLK3-220ENST00000567992 MZT2AQ6P582 158 aa7.73□□□□□ -1.17
CLK3-220ENST00000567992 SLC35E3Q7Z769 313 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms