RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	HES5	Q5TA89	166 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	CD200R1L	Q6Q8B3	271 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635		Q6ZPA2	131 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	ZNF833P	Q6ZTB9	187 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	ZNF695	Q8IW36	515 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	GIMAP1	Q8WWP7	306 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	PHF21A	Q96BD5	680 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	RBMXL1	Q96E39	390 aa	Known RBP	5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	RCC1L	Q96I51	464 aa	Known RBP	5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	ARHGAP5-AS1	Q96IT6	56 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	RITA1	Q96K30	269 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	NABP2	Q9BQ15	211 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	CMSS1	Q9BQ75	279 aa	Known RBP	5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	ZNF251	Q9BRH9	671 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	CHCHD6	Q9BRQ6	235 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	HDHD3	Q9BSH5	251 aa	Predicted RBP	5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	PECR	Q9BY49	303 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	MRPL20	Q9BYC9	149 aa	Known RBP	5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635		Q9N2K0	584 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	DIABLO	Q9NR28	239 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	NECAP2	Q9NVZ3	263 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	NDUFB11	Q9NX14	153 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	PIPOX	Q9P0Z9	390 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	ZMAT5	Q9UDW3	170 aa	Known RBP	5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	SLC23A1	Q9UHI7	598 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	DAPK2	Q9UIK4	370 aa		5.44	□□□□□ -1.54
SF3B3-209	ENST00000567635	SAA2-SAA4	A0A096LPE2	208 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	TMEM272	A0A1B0GTI8	110 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	IFITM5	A6NNB3	132 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	TRDC	B7Z8K6	153 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	ITGB1BP1	O14713	200 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	NBR2	O15453	112 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	ST8SIA5	O15466	376 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	IGHG4	P01861	327 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	IGF1	P05019	195 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	RPLP1	P05386	114 aa	Known RBP	5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	ELANE	P08246	267 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	SCT	P09683	121 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	CD3G	P09693	182 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	SAA2	P0DJI9	122 aa	Predicted RBP	5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	CT45A6	P0DMU7	189 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	CT45A5	P0DMU8	189 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	CT45A7	P0DMV0	189 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	SLC2A2	P11168	524 aa	Predicted RBP	5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	RAB3B	P20337	219 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	GADD45A	P24522	165 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	MYL9	P24844	172 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	MYCNOS	P40205	109 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	CDX1	P47902	265 aa	Predicted RBP	5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	THBS3	P49746	956 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	GNG2	P59768	71 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	CTAG1A	P78358	180 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	HLA-DRB3	P79483	266 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	MRPS15	P82914	257 aa	Known RBP	5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	OXA1L	Q15070	435 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	C5orf64	Q2M2E5	130 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	RPL39P5	Q59GN2	51 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	C4orf48	Q5BLP8	95 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	CXorf66	Q5JRM2	361 aa	Predicted RBP	5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	PLAC9	Q5JTB6	97 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	LIN54	Q6MZP7	749 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	FAM71F2	Q6NXP2	309 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	LINC00299	Q6ZSB3	139 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	C18orf65	Q6ZTR6	163 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	C8orf86	Q6ZUL3	223 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	MRPL41	Q8IXM3	137 aa	Known RBP	5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	LINC00482	Q8N8I6	264 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	KLHL30-AS1	Q8NEE0	82 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	NPB	Q8NG41	125 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	EDARADD	Q8WWZ3	215 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	PTX4	Q96A99	478 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	RAB3C	Q96E17	227 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	ABHD14B	Q96IU4	210 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	HSPB9	Q9BQS6	159 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	AGMAT	Q9BSE5	352 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	WDR12	Q9GZL7	423 aa	Known RBP	5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	PARP12	Q9H0J9	701 aa	Known RBP	5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	C11orf54	Q9H0W9	315 aa	Predicted RBP	5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	OR51E2	Q9H255	320 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	IFI27L2	Q9H2X8	130 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	C12orf4	Q9NQ89	552 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	OR1A1	Q9P1Q5	309 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	KIAA1456	Q9P272	454 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	ZNF107	Q9UII5	783 aa	Predicted RBP	5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	RNF150	Q9ULK6	438 aa		5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	TMA7	Q9Y2S6	64 aa	Known RBP	5.43	□□□□□ -1.54
SF3B3-209	ENST00000567635	SHISA3	A0PJX4	238 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	METTL21EP	A6NDL7	271 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	OR5H14	A6NHG9	310 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	CCL24	O00175	119 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	RBBP9	O75884	186 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	GSTP1	P09211	210 aa	Known RBP	5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	OR5H8	P0DN80	308 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	ZNF182	P17025	639 aa	Predicted RBP	5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	RAB6A	P20340	208 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	VDAC1	P21796	283 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	CNTFR	P26992	372 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	FGF9	P31371	208 aa	Predicted RBP	5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	OR10A3	P58181	314 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	VBP1	P61758	197 aa		5.42	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 131 ms