RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 RFXANKO14593 260 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 GPR171O14626 319 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 ORC5O43913 435 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 PPBPP02775 128 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 CLPSP04118 112 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 SHBGP04278 402 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 UCHL1P09936 223 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 OR13C7P0DN81 318 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 ATP6V0CP27449 155 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 PEX19P40855 299 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 ACTR1BP42025 376 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 PSMB3P49720 205 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 CDK9P50750 372 aaKnown RBP-0.11□□□□□ -2.43
CDH1-211ENST00000567320 AQP5P55064 265 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 FGF12P61328 243 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 XRCC4Q13426 336 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 USF2Q15853 346 aaPredicted RBP-0.11□□□□□ -2.43
CDH1-211ENST00000567320 ARHGAP11BQ3KRB8 267 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 SPRNQ5BIV9 151 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 MESTQ5EB52 335 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 CENPWQ5EE01 88 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 SAPCD1Q5SSQ6 148 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 C10orf55Q5SWW7 151 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 C6orf183Q5T699 404 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 FAM27BQ5VT28 67 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 FAHD1Q6P587 224 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 AMTNQ6UX39 209 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 GRINAQ7Z429 371 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 SPATA12Q7Z6I5 190 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 TMCO2Q7Z6W1 182 aaPredicted RBP-0.11□□□□□ -2.43
CDH1-211ENST00000567320 LINC00523Q86TU6 105 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 OR52K2Q8NGK3 314 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 OR13C9Q8NGT0 318 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 OR6K2Q8NGY2 324 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 OR6N2Q8NGY6 317 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 CLDND2Q8NHS1 167 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 SGMS2Q8NHU3 365 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 RPS4Y2Q8TD47 263 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 NMNAT3Q96T66 252 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 CIB1Q99828 191 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 NABP2Q9BQ15 211 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 PRRG3Q9BZD7 231 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 DMAC2Q9NW81 257 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 STMN3Q9NZ72 180 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 HHLA2Q9UM44 414 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 ABCC12Q96J65 1359 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 CHD2O14647 1828 aaKnown RBP-0.11□□□□□ -2.43
CDH1-211ENST00000567320 DSCAMO60469 2012 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 TNRC6AQ8NDV7 1962 aaKnown RBP-0.12□□□□□ -2.43
CDH1-211ENST00000567320 CHD5Q8TDI0 1954 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 SYNE2Q8WXH0 6885 aaKnown RBP-0.12□□□□□ -2.43
CDH1-211ENST00000567320 FREM1Q5H8C1 2179 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 APCP25054 2843 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 IGKV1D-42A0A075B6H8 117 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 TRAV7A0A075B6U4 112 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 MEIS3P1A6NDR6 274 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 TMEM212A6NML5 194 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 IBA57-AS1B1ANH7 110 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 H3BT86 120 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 hCG_2039718K7EN88 272 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 CDIPTO14735 213 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 KDELR3O43731 214 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 STK16O75716 305 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 VAPBO95292 243 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 ASS1P00966 412 aaKnown RBP-0.12□□□□□ -2.43
CDH1-211ENST00000567320 IGLV3-27P01718 113 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 MBP02144 154 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 LGALS1P09382 135 aaKnown RBP-0.12□□□□□ -2.43
CDH1-211ENST00000567320 STAG3L3P0CL85 134 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 CCL5P13501 91 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 CDK2P24941 298 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 DEKP35659 375 aaKnown RBP-0.12□□□□□ -2.43
CDH1-211ENST00000567320 RPL28P46779 137 aaKnown RBP-0.12□□□□□ -2.43
CDH1-211ENST00000567320 TAS2R30P59541 319 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 TAS2R20P59543 309 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 RUNX1Q01196 453 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 PAFAH1B3Q15102 231 aaKnown RBP-0.12□□□□□ -2.43
CDH1-211ENST00000567320 SPATA31B1PQ5VZV4 182 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 PDPK2PQ6A1A2 396 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 LYZL1Q6UWQ5 148 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-0.12□□□□□ -2.43
CDH1-211ENST00000567320 ZNF705AQ6ZN79 300 aaPredicted RBP-0.12□□□□□ -2.43
CDH1-211ENST00000567320 PLCZ1Q86YW0 608 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 C1orf174Q8IYL3 243 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 ZNF565Q8N9K5 539 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 CDRT4Q8N9R6 151 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 CCDC112Q8NEF3 446 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 OR1L8Q8NGR8 309 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 OR2Y1Q8NGV0 311 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 SMCR5Q8TEV8 140 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 ASB13Q8WXK3 278 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 LRRC39Q96DD0 335 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 SFRP2Q96HF1 295 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 ABHD14BQ96IU4 210 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 IMMP2LQ96T52 175 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 FAM103A1Q9BTL3 118 aaKnown RBP-0.12□□□□□ -2.43
CDH1-211ENST00000567320 GNB1LQ9BYB4 327 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 OR8D2Q9GZM6 311 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 MED28Q9H204 178 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 SYT4Q9H2B2 425 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms