RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 SOCS1O15524 211 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 DENRO43583 198 aaKnown RBP8.11□□□□□ -1.11
LINC00564-201ENST00000567258 RBBP9O75884 186 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 NAPSAO96009 420 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 CD3GP09693 182 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 OR8U8P0C7N1 319 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 GADD45AP24522 165 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 MYL9P24844 172 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 KRTAP10-11P60412 298 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 RPS25P62851 125 aaKnown RBP8.11□□□□□ -1.11
LINC00564-201ENST00000567258 HLA-DRB3P79483 266 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 CBX3Q13185 183 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 C5orf64Q2M2E5 130 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 FAM131AQ6UXB0 335 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 C5orf24Q7Z6I8 188 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 ODF3L1Q8IXM7 274 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 RNF152Q8N8N0 203 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 NPBQ8NG41 125 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 OR11H1Q8NG94 326 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 FAM3DQ96BQ1 224 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 UBE2E2Q96LR5 201 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 CNBD2Q96M20 576 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 LPAR5Q9H1C0 372 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 VSIG4Q9Y279 399 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 WASHC3Q9Y3C0 194 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 U3KQE9 123 aa8.11□□□□□ -1.11
LINC00564-201ENST00000567258 TRBV6-6A0A0A6YYG2 114 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 SEC14L6B5MCN3 397 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 ITGB1BP1O14713 200 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 RRHO14718 337 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 APOA2P02652 100 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 CRHBPP24387 322 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 CNTFRP26992 372 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 PSMB8P28062 276 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 QRFPP83859 136 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 MLANAQ16655 118 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 ECSCRQ19T08 205 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 C2orf76Q3KRA6 126 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 RPL39P5Q59GN2 51 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 VAX1Q5SQQ9 334 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 ZNF660Q6AZW8 331 aaPredicted RBP8.1□□□□□ -1.11
LINC00564-201ENST00000567258 ZNF880Q6PDB4 577 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 IZUMO2Q6UXV1 221 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 TMEM91Q6ZNR0 172 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 TCTEX1D1Q8N7M0 179 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 NRG4Q8WWG1 115 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 ABHD14BQ96IU4 210 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 RNF5Q99942 180 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 CENPOQ9BU64 300 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 PECRQ9BY49 303 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 IFI27L2Q9H2X8 130 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.1□□□□□ -1.11
LINC00564-201ENST00000567258 RAB22AQ9UL26 194 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 RBM7Q9Y580 266 aaKnown RBP8.1□□□□□ -1.11
LINC00564-201ENST00000567258 SORL1Q92673 2214 aa8.1□□□□□ -1.11
LINC00564-201ENST00000567258 A0A0A6YYD4 124 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 IGHV7-81A0A0B4J1V7 117 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 A0A1W2PN81 502 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 METTL21EPA6NDL7 271 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 TRDCB7Z8K6 153 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 G3V318 75 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 NDUFA3O95167 84 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 CD37P11049 281 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 CHRNA7P36544 502 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 ECI1P42126 302 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 SERPINB10P48595 397 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 RAB9AP51151 201 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 INSL3P51460 131 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 CLDN12P56749 244 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 RPS16P62249 146 aaKnown RBP8.09□□□□□ -1.11
LINC00564-201ENST00000567258 FABP5Q01469 135 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 CFHR3Q02985 330 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 ZNF616Q08AN1 781 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 ZNF260Q3ZCT1 412 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 HES5Q5TA89 166 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 PYHIN1Q6K0P9 492 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 GLDNQ6ZMI3 551 aaPredicted RBP8.09□□□□□ -1.11
LINC00564-201ENST00000567258 ZNF367Q7RTV3 350 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 FAM89BQ8N5H3 189 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 ZNF491Q8N8L2 437 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 OR1N2Q8NGR9 330 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 OR10J5Q8NHC4 309 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 RAB3CQ96E17 227 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 RBMXL1Q96E39 390 aaKnown RBP8.09□□□□□ -1.11
LINC00564-201ENST00000567258 ARHGAP5-AS1Q96IT6 56 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 RITA1Q96K30 269 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 TSNAXQ99598 290 aaKnown RBP8.09□□□□□ -1.11
LINC00564-201ENST00000567258 HDHD3Q9BSH5 251 aaPredicted RBP8.09□□□□□ -1.11
LINC00564-201ENST00000567258 C11orf54Q9H0W9 315 aaPredicted RBP8.09□□□□□ -1.11
LINC00564-201ENST00000567258 FBXL15Q9H469 300 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 Q9N2K0 584 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 METTL1Q9UBP6 276 aaKnown RBP8.09□□□□□ -1.11
LINC00564-201ENST00000567258 FOXA2Q9Y261 457 aaPredicted RBP8.09□□□□□ -1.11
LINC00564-201ENST00000567258 A3GALT2U3KPV4 340 aa8.09□□□□□ -1.11
LINC00564-201ENST00000567258 COL7A1Q02388 2944 aa8.08□□□□□ -1.12
LINC00564-201ENST00000567258 H0YJW9 148 aa8.08□□□□□ -1.12
LINC00564-201ENST00000567258 BET1O15155 118 aa8.08□□□□□ -1.12
LINC00564-201ENST00000567258 LY86O95711 162 aa8.08□□□□□ -1.12
LINC00564-201ENST00000567258 TFAP2AP05549 437 aa8.08□□□□□ -1.12
LINC00564-201ENST00000567258 SCTP09683 121 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms