RNA–Protein interactions for RNA: ENST00000566732.5

TAF1C-216, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, human

APPRIS ALT2 TSL 2 BASIC

Gene TAF1C, Length 2,972 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1C-216	ENST00000566732	FAM90A7P	A6NKC0	464 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	FAM90A22P	A8MWA6	464 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	FAM90A12P	A8MX19	464 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	FAM90A5P	A8MXJ8	464 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	FAM90A23P	A8MXZ1	464 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	FAM90A15P	P0C7V4	464 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	FAM90A13P	P0C7W8	464 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	FAM90A14P	P0C7W9	464 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	FAM90A24P	P0C7X0	464 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	TOMM20L	Q6UXN7	152 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	MED12L	Q86YW9	2145 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	ZNF114	Q8NC26	417 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	NAGK	Q9UJ70	344 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	DEGS1	O15121	323 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	SELE	P16581	610 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	COL8A2	P25067	703 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	GDF1	P27539	372 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	LINC00205	P59089	165 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	FAM58A	Q8N1B3	248 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	NEIL1	Q96FI4	390 aa	Predicted RBP	12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	IMMP2L	Q96T52	175 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	PRDM14	Q9GZV8	571 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	PRDM6	Q9NQX0	595 aa		12.79	□□□□□ -0.36
TAF1C-216	ENST00000566732	TRAV38-1	A0A0B4J264	116 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	TMEM250	H0YL14	139 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	ZG16	O60844	167 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	MRPL33	O75394	65 aa	Known RBP	12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732		P04436	131 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	CCL4	P13236	92 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	CA6	P23280	308 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	TDGF1P3	P51864	188 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	ERVFC1-1	P60608	527 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	DRAM1	Q8N682	238 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	OR1L1	Q8NH94	360 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	IMMP1L	Q96LU5	166 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	GGCT	O75223	188 aa	Known RBP	12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	PDLIM4	P50479	330 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	RAB4B	P61018	213 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	PPP1CB	P62140	327 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	KCNIP4	Q6PIL6	250 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	LSM10	Q969L4	123 aa	Known RBP	12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	NCKAP5	O14513	1909 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	NDUFB4	O95168	129 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	CEBPD	P49716	269 aa	Predicted RBP	12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	MCEMP1	Q8IX19	187 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732		Q8NFD4	153 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	PATZ1	Q9HBE1	687 aa	Known RBP	12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	MSL2	Q9HCI7	577 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	MANBAL	Q9NQG1	85 aa		12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	LIN7C	Q9NUP9	197 aa	Known RBP	12.78	□□□□□ -0.36
TAF1C-216	ENST00000566732	SLC25A6	P12236	298 aa		12.77	□□□□□ -0.36
TAF1C-216	ENST00000566732	THBS3	P49746	956 aa		12.77	□□□□□ -0.36
TAF1C-216	ENST00000566732	PAM16	Q9Y3D7	125 aa		12.77	□□□□□ -0.36
TAF1C-216	ENST00000566732	KIAA1549	Q9HCM3	1950 aa		12.77	□□□□□ -0.37
TAF1C-216	ENST00000566732	DOCK10	Q96BY6	2186 aa		12.77	□□□□□ -0.37
TAF1C-216	ENST00000566732	NPS	P0C0P6	89 aa		12.77	□□□□□ -0.37
TAF1C-216	ENST00000566732	CCKAR	P32238	428 aa		12.77	□□□□□ -0.37
TAF1C-216	ENST00000566732	CISD2	Q8N5K1	135 aa	Known RBP	12.77	□□□□□ -0.37
TAF1C-216	ENST00000566732	ZNF709	Q8N972	641 aa		12.77	□□□□□ -0.37
TAF1C-216	ENST00000566732	ANAPC16	Q96DE5	110 aa		12.77	□□□□□ -0.37
TAF1C-216	ENST00000566732		A0A1B0GWJ7	208 aa		12.76	□□□□□ -0.37
TAF1C-216	ENST00000566732	MB	P02144	154 aa		12.76	□□□□□ -0.37
TAF1C-216	ENST00000566732	OTX2	P32243	289 aa		12.76	□□□□□ -0.37
TAF1C-216	ENST00000566732	TMEM14EP	Q6UXP3	125 aa		12.76	□□□□□ -0.37
TAF1C-216	ENST00000566732	SGMS2	Q8NHU3	365 aa		12.76	□□□□□ -0.37
TAF1C-216	ENST00000566732	DEPP	Q9NTK1	212 aa		12.76	□□□□□ -0.37
TAF1C-216	ENST00000566732	PINLYP	A6NC86	204 aa		12.76	□□□□□ -0.37
TAF1C-216	ENST00000566732	TFF1	P04155	84 aa		12.76	□□□□□ -0.37
TAF1C-216	ENST00000566732	COX5A	P20674	150 aa		12.76	□□□□□ -0.37
TAF1C-216	ENST00000566732	IGFBP4	P22692	258 aa		12.76	□□□□□ -0.37
TAF1C-216	ENST00000566732	SRD5A2	P31213	254 aa		12.76	□□□□□ -0.37
TAF1C-216	ENST00000566732	EDDM3B	P56851	147 aa		12.76	□□□□□ -0.37
TAF1C-216	ENST00000566732	GNB1	P62873	340 aa		12.76	□□□□□ -0.37
TAF1C-216	ENST00000566732	LINC01551	Q86U37	167 aa		12.76	□□□□□ -0.37
TAF1C-216	ENST00000566732	TOX3	O15405	576 aa	Predicted RBP	12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	KLF7	O75840	302 aa	Predicted RBP	12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	ADM	P35318	185 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	TGFBR3	Q03167	851 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	SRSF7	Q16629	238 aa	Known RBP eCLIP	12.75	□□□□□ -0.37	3e-7	■□□□□ 8.4
TAF1C-216	ENST00000566732	C1orf194	Q5T5A4	169 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	COLCA1	Q6ZS62	124 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	TUSC5	Q8IXB3	177 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	OR5A2	Q8NGI9	324 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	TMEM147	Q9BVK8	224 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	NPCDR1	Q9BY65	106 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	OR2D2	Q9H210	308 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	LY6G6E	A0A0G2JKS1	128 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	ANKRD30BL	A7E2S9	258 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	S1PR2	O95136	353 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	HPRT1	P00492	218 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	IRF2	P14316	349 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	CBLN1	P23435	193 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	RPL30	P62888	115 aa	Known RBP	12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	OR10P1	Q8NGE3	313 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	RIMS4	Q9H426	269 aa	Predicted RBP	12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	PARD6A	Q9NPB6	346 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732		U3KQA8	63 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	WDFY4	Q6ZS81	3184 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	ODAM	A1E959	279 aa		12.75	□□□□□ -0.37
TAF1C-216	ENST00000566732	RBFOX2	O43251	390 aa	Known RBP eCLIP	12.75	□□□□□ -0.37	3e-7	■■■■■ 28.5

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms