RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 SPNP16150 400 aa11.57□□□□□ -0.56
RNF40-209ENST00000566703 SLURP1P55000 103 aa11.57□□□□□ -0.56
RNF40-209ENST00000566703 PSG5Q15238 335 aa11.57□□□□□ -0.56
RNF40-209ENST00000566703 ACTBL2Q562R1 376 aa11.57□□□□□ -0.56
RNF40-209ENST00000566703 UNQ5815/PRO19632Q6UWF5 114 aa11.57□□□□□ -0.56
RNF40-209ENST00000566703 GLDNQ6ZMI3 551 aaPredicted RBP11.57□□□□□ -0.56
RNF40-209ENST00000566703 SBSPONQ8IVN8 264 aa11.57□□□□□ -0.56
RNF40-209ENST00000566703 ALX4Q9H161 411 aaPredicted RBP11.57□□□□□ -0.56
RNF40-209ENST00000566703 VCXQ9H320 206 aa11.57□□□□□ -0.56
RNF40-209ENST00000566703 Q9N2K0 584 aa11.57□□□□□ -0.56
RNF40-209ENST00000566703 SCN3BQ9NY72 215 aa11.57□□□□□ -0.56
RNF40-209ENST00000566703 LSM2Q9Y333 95 aaKnown RBP11.57□□□□□ -0.56
RNF40-209ENST00000566703 IGHV4OR15-8A0A075B7B6 117 aa11.56□□□□□ -0.56
RNF40-209ENST00000566703 A0A087WW49 117 aa11.56□□□□□ -0.56
RNF40-209ENST00000566703 A0A0A6YYD4 124 aa11.56□□□□□ -0.56
RNF40-209ENST00000566703 PTGES3LE9PB15 166 aa11.56□□□□□ -0.56
RNF40-209ENST00000566703 SLC17A2O00624 439 aa11.56□□□□□ -0.56
RNF40-209ENST00000566703 SOCS1O15524 211 aa11.56□□□□□ -0.56
RNF40-209ENST00000566703 HSPA12AO43301 675 aa11.56□□□□□ -0.56
RNF40-209ENST00000566703 PROP1O75360 226 aa11.56□□□□□ -0.56
RNF40-209ENST00000566703 TFAP2AP05549 437 aa11.56□□□□□ -0.56
RNF40-209ENST00000566703 GP9P14770 177 aa11.56□□□□□ -0.56
RNF40-209ENST00000566703 ARSBP15848 533 aa11.56□□□□□ -0.56
RNF40-209ENST00000566703 HLA-DRB3P79483 266 aa11.56□□□□□ -0.56
RNF40-209ENST00000566703 ABHD5Q8WTS1 349 aa11.56□□□□□ -0.56
RNF40-209ENST00000566703 OR4C12Q96R67 309 aa11.56□□□□□ -0.56
RNF40-209ENST00000566703 PARP12Q9H0J9 701 aaKnown RBP11.56□□□□□ -0.56
RNF40-209ENST00000566703 METTL1Q9UBP6 276 aaKnown RBP11.56□□□□□ -0.56
RNF40-209ENST00000566703 AK3Q9UIJ7 227 aa11.56□□□□□ -0.56
RNF40-209ENST00000566703 ZNF221Q9UK13 617 aa11.56□□□□□ -0.56
RNF40-209ENST00000566703 GAB2Q9UQC2 676 aa11.56□□□□□ -0.56
RNF40-209ENST00000566703 FOXI3A8MTJ6 420 aaPredicted RBP11.55□□□□□ -0.56
RNF40-209ENST00000566703 SCTP09683 121 aa11.55□□□□□ -0.56
RNF40-209ENST00000566703 CPEP16870 476 aa11.55□□□□□ -0.56
RNF40-209ENST00000566703 TMEM50BP56557 158 aa11.55□□□□□ -0.56
RNF40-209ENST00000566703 RPS16P62249 146 aaKnown RBP11.55□□□□□ -0.56
RNF40-209ENST00000566703 PITPNAQ00169 270 aa11.55□□□□□ -0.56
RNF40-209ENST00000566703 TPBGQ13641 420 aa11.55□□□□□ -0.56
RNF40-209ENST00000566703 IRF3Q14653 427 aa11.55□□□□□ -0.56
RNF40-209ENST00000566703 MED22Q15528 200 aa11.55□□□□□ -0.56
RNF40-209ENST00000566703 TRAM1Q15629 374 aa11.55□□□□□ -0.56
RNF40-209ENST00000566703 PDPNQ86YL7 162 aa11.55□□□□□ -0.56
RNF40-209ENST00000566703 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.55□□□□□ -0.56
RNF40-209ENST00000566703 LFNGQ8NES3 379 aa11.55□□□□□ -0.56
RNF40-209ENST00000566703 UFD1Q92890 307 aa11.55□□□□□ -0.56
RNF40-209ENST00000566703 TMEM68Q96MH6 324 aa11.55□□□□□ -0.56
RNF40-209ENST00000566703 RCHY1Q96PM5 261 aa11.55□□□□□ -0.56
RNF40-209ENST00000566703 ELOVL1Q9BW60 279 aa11.55□□□□□ -0.56
RNF40-209ENST00000566703 C12orf4Q9NQ89 552 aa11.55□□□□□ -0.56
RNF40-209ENST00000566703 OR1A1Q9P1Q5 309 aa11.55□□□□□ -0.56
RNF40-209ENST00000566703 A3GALT2U3KPV4 340 aa11.55□□□□□ -0.56
RNF40-209ENST00000566703 KMT2CQ8NEZ4 4911 aaKnown RBP11.54□□□□□ -0.56
RNF40-209ENST00000566703 SORL1Q92673 2214 aa11.54□□□□□ -0.56
RNF40-209ENST00000566703 ERICH4A6NGS2 130 aa11.54□□□□□ -0.56
RNF40-209ENST00000566703 H3BUA1 57 aa11.54□□□□□ -0.56
RNF40-209ENST00000566703 ARL6IP5O75915 188 aa11.54□□□□□ -0.56
RNF40-209ENST00000566703 PSMA1P25786 263 aaKnown RBP11.54□□□□□ -0.56
RNF40-209ENST00000566703 LGALS7P47929 136 aa11.54□□□□□ -0.56
RNF40-209ENST00000566703 SERPINB10P48595 397 aa11.54□□□□□ -0.56
RNF40-209ENST00000566703 PSMD7P51665 324 aa11.54□□□□□ -0.56
RNF40-209ENST00000566703 TPPP2P59282 170 aa11.54□□□□□ -0.56
RNF40-209ENST00000566703 MOGAT2Q3SYC2 334 aa11.54□□□□□ -0.56
RNF40-209ENST00000566703 TMEM91Q6ZNR0 172 aa11.54□□□□□ -0.56
RNF40-209ENST00000566703 MUC7Q8TAX7 377 aa11.54□□□□□ -0.56
RNF40-209ENST00000566703 ARPC1AQ92747 370 aa11.54□□□□□ -0.56
RNF40-209ENST00000566703 MS4A10Q96PG2 267 aa11.54□□□□□ -0.56
RNF40-209ENST00000566703 CLCC1Q96S66 551 aa11.54□□□□□ -0.56
RNF40-209ENST00000566703 CMSS1Q9BQ75 279 aaKnown RBP11.54□□□□□ -0.56
RNF40-209ENST00000566703 HDHD3Q9BSH5 251 aaPredicted RBP11.54□□□□□ -0.56
RNF40-209ENST00000566703 FAM103A1Q9BTL3 118 aaKnown RBP11.54□□□□□ -0.56
RNF40-209ENST00000566703 KCNK15Q9H427 330 aa11.54□□□□□ -0.56
RNF40-209ENST00000566703 ZMAT4Q9H898 229 aa11.54□□□□□ -0.56
RNF40-209ENST00000566703 PLGRKTQ9HBL7 147 aa11.54□□□□□ -0.56
RNF40-209ENST00000566703 RANGRFQ9HD47 186 aaPredicted RBP11.54□□□□□ -0.56
RNF40-209ENST00000566703 A0A0G2JLM5 398 aa11.53□□□□□ -0.56
RNF40-209ENST00000566703 TRDCB7Z8K6 153 aa11.53□□□□□ -0.56
RNF40-209ENST00000566703 BRI3O95415 125 aa11.53□□□□□ -0.56
RNF40-209ENST00000566703 CA2P00918 260 aa11.53□□□□□ -0.56
RNF40-209ENST00000566703 IGHV3-11P01762 117 aa11.53□□□□□ -0.56
RNF40-209ENST00000566703 APOA2P02652 100 aa11.53□□□□□ -0.56
RNF40-209ENST00000566703 FRMD6-AS1P0C7T7 363 aa11.53□□□□□ -0.56
RNF40-209ENST00000566703 ZP3P21754 424 aa11.53□□□□□ -0.56
RNF40-209ENST00000566703 TAGLNQ01995 201 aaKnown RBP11.53□□□□□ -0.56
RNF40-209ENST00000566703 FXYD3Q14802 87 aa11.53□□□□□ -0.56
RNF40-209ENST00000566703 ZNF383Q8NA42 475 aa11.53□□□□□ -0.56
RNF40-209ENST00000566703 DRAXINQ8NBI3 349 aaPredicted RBP11.53□□□□□ -0.56
RNF40-209ENST00000566703 OR56B1Q8NGI3 324 aa11.53□□□□□ -0.56
RNF40-209ENST00000566703 CASTOR1Q8WTX7 329 aa11.53□□□□□ -0.56
RNF40-209ENST00000566703 TMEM203Q969S6 136 aa11.53□□□□□ -0.56
RNF40-209ENST00000566703 GFI1Q99684 422 aa11.53□□□□□ -0.56
RNF40-209ENST00000566703 PECRQ9BY49 303 aa11.53□□□□□ -0.56
RNF40-209ENST00000566703 DUSP21Q9H596 190 aa11.53□□□□□ -0.56
RNF40-209ENST00000566703 STUB1Q9UNE7 303 aa11.53□□□□□ -0.56
RNF40-209ENST00000566703 TPRKBQ9Y3C4 175 aa11.53□□□□□ -0.56
RNF40-209ENST00000566703 A8MZ25 164 aa11.52□□□□□ -0.57
RNF40-209ENST00000566703 DIRAS3O95661 229 aa11.52□□□□□ -0.57
RNF40-209ENST00000566703 TRGV3P03979 118 aa11.52□□□□□ -0.57
RNF40-209ENST00000566703 IGKV1-16P04430 117 aa11.52□□□□□ -0.57
RNF40-209ENST00000566703 VEGFCP49767 419 aa11.52□□□□□ -0.57
RNF40-209ENST00000566703 P2RY14Q15391 338 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms