RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 RND1Q92730 232 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 RBKSQ9H477 322 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 SSUH2Q9Y2M2 353 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 DOCK11Q5JSL3 2073 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 C12orf77C9JDV5 145 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 PAGE4O60829 102 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 MMP9P14780 707 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 CD82P27701 267 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 FAM201AQ5SY85 155 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 STUMQ69YW2 141 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 CCL13Q99616 98 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 TMEM204Q9BSN7 226 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 SAMD10Q9BYL1 202 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 KCNIP2Q9NS61 270 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 RPRMQ9NS64 109 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 TRBV6-7A0A0A0MS04 114 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 ZNF320A2RRD8 509 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 ZG16O60844 167 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 OR10D4PQ8NGN7 298 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 C18orf12Q96KH6 178 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 TMEM68Q96MH6 324 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 LIME1Q9H400 295 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 GAR1Q9NY12 217 aaKnown RBP9.83□□□□□ -0.84
CDH1-210ENST00000566612 SCGB1D1O95968 90 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 CTRB1P17538 263 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 CTRB2Q6GPI1 263 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 C9orf106Q8NAJ2 232 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 SLC35E1Q96K37 410 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 HSD17B10Q99714 261 aaKnown RBP9.82□□□□□ -0.84
CDH1-210ENST00000566612 PIEZO2Q9H5I5 2752 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 ZNF98A6NK75 572 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 IL18BPO95998 194 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 HRASP01112 189 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 MEOX2P50222 304 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 HES1Q14469 280 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 P2RY6Q15077 328 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 TMEM42Q69YG0 159 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 ZNF66Q6ZN08 573 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 GINS3Q9BRX5 216 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 TOLLIPQ9H0E2 274 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 VAX2Q9UIW0 290 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 SZT2Q5T011 3432 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 AHRRA9YTQ3 701 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 FABP4P15090 132 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 REG1BP48304 166 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 BSXQ3C1V8 233 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 FOXL2NBQ6ZUU3 175 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 RNF7Q9UBF6 113 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 CUL9Q8IWT3 2517 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 DENND4AQ7Z401 1863 aa9.82□□□□□ -0.84
CDH1-210ENST00000566612 F6UZH7 168 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 DVL1O14640 695 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 ADH4P08319 380 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 ERHP84090 104 aaKnown RBP9.81□□□□□ -0.84
CDH1-210ENST00000566612 ZNF90Q03938 601 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 ATP6V1FQ16864 119 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 TRAT1Q6PIZ9 186 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 ZNF645Q8N7E2 425 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 RYDENQ9NUL5 291 aaKnown RBP9.81□□□□□ -0.84
CDH1-210ENST00000566612 PLCE1Q9P212 2302 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 ODAMA1E959 279 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 NDUFB3O43676 98 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 CNIH1O95406 144 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 TNFRSF9Q07011 255 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 ZBTB34Q8NCN2 500 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 OR4S2Q8NH73 311 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 TAF15Q92804 592 aaKnown RBP eCLIP9.81□□□□□ -0.84
CDH1-210ENST00000566612 AP4M1O00189 453 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 SPINK4O60575 86 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 GYPAP02724 150 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 BCL2P10415 239 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 SSTP61278 116 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 KHDC3LQ587J8 217 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 RNFT1Q5M7Z0 435 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 MRGPRGQ86SM5 289 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 H1FOOQ8IZA3 346 aaPredicted RBP9.81□□□□□ -0.84
CDH1-210ENST00000566612 SLC35D1Q9NTN3 355 aa9.81□□□□□ -0.84
CDH1-210ENST00000566612 CARHSP1Q9Y2V2 147 aaKnown RBP9.81□□□□□ -0.84
CDH1-210ENST00000566612 C11orf94C9JXX5 98 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 MGST3O14880 152 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 CCL20P78556 96 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 SSX2Q16385 188 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 RHOVQ96L33 236 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 GTF3C1Q12789 2109 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 TSTD3H0UI37 97 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 CDX4O14627 284 aaPredicted RBP9.8□□□□□ -0.84
CDH1-210ENST00000566612 YIF1AO95070 293 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 SNRPCP09234 159 aaKnown RBP9.8□□□□□ -0.84
CDH1-210ENST00000566612 DEFA4P12838 97 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 GALR1P47211 349 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 RAB7AP51149 207 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 DEFA6Q01524 100 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 SRSF4Q08170 494 aaKnown RBP9.8□□□□□ -0.84
CDH1-210ENST00000566612 FOXF2Q12947 444 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 RNF212Q495C1 297 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 BAGE3Q86Y29 109 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 BAGE2Q86Y30 109 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 ZDHHC16Q969W1 377 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 TMEM56Q96MV1 263 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 DOK5Q9P104 306 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms